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RBG_13_OP3_44_8_RBG_13_scaffold_9427

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_13_OP3_44_8_RBG_13_scaffold_9427_1
unknown

Not on your lists

comp(3..329)
DNA (327bp) protein (109aa)
Ribosomal RNA small subunit methyltransferase D id=2318331 bin=GWA2_OP3_53_43 species=Myxococcus sp. (contaminant ex DSM 436) genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
rsmD; N6-adenine-specific methylase
RBG_13_OP3_44_8_RBG_13_scaffold_9427_2
unknown

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comp(351..2444)
DNA (2094bp) protein (698aa)
RecG; ATP-dependent DNA helicase RecG; K03655 ATP-dependent DNA helicase RecG [EC:3.6.4.12]
Putative uncharacterized protein id=4801958 bin=GWC2_OP3_44_8 species=uncultured bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
RBG_13_OP3_44_8_RBG_13_scaffold_9427_3
unknown

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comp(2455..2904)
DNA (450bp) protein (150aa)
Putative uncharacterized protein id=2268945 bin=GWA2_Elusimicrobia_66_18 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
RBG_13_OP3_44_8_RBG_13_scaffold_9427_4
unknown

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comp(3107..3430)
DNA (324bp) protein (108aa)

This feature has no annotations

RBG_13_OP3_44_8_RBG_13_scaffold_9427_5
unknown

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comp(3448..3666)
DNA (219bp) protein (73aa)

This feature has no annotations

RBG_13_OP3_44_8_RBG_13_scaffold_9427_6
unknown

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comp(3782..4342)
DNA (561bp) protein (187aa)

This feature has no annotations

RBG_13_OP3_44_8_RBG_13_scaffold_9427_7
unknown

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4464..4904
DNA (441bp) protein (147aa)

This feature has no annotations

RBG_13_OP3_44_8_RBG_13_scaffold_9427_8
unknown

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comp(4927..5085)
DNA (159bp) protein (53aa)
id=3984678 bin=GWF2_OP3_43_52 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
RBG_13_OP3_44_8_RBG_13_scaffold_9427_9
unknown

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comp(5097..5585)
DNA (489bp) protein (163aa)

This feature has no annotations

RBG_13_OP3_44_8_RBG_13_scaffold_9427_10
unknown

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comp(5701..6330)
DNA (630bp) protein (210aa)
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; K01625 2-dehydro-3-deoxyphosphogluconate aldolase / 4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.16]
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase id=4114755 bin=GWF2_OP3_38_59 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
RBG_13_OP3_44_8_RBG_13_scaffold_9427_11
unknown

Not on your lists

comp(6334..7284)
DNA (951bp) protein (317aa)
hypothetical protein n=1 Tax=Omnitrophica bacterium SCGC AAA252-B19 RepID=UPI00035F44B1
putative 4-hydroxy-2-oxovalerate aldolase
RBG_13_OP3_44_8_RBG_13_scaffold_9427_12
unknown

Not on your lists

comp(7298..7600)
DNA (303bp) protein (101aa)
YGGT family protein id=2152023 bin=GWB2_CP_45_9 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
hypothetical protein; K02221 YggT family protein
RBG_13_OP3_44_8_RBG_13_scaffold_9427_13
unknown

Not on your lists

comp(7601..7789)
DNA (189bp) protein (63aa)
Transcription elongation factor GreA id=4304659 bin=GWC2_OP3_44_8 species=Tepidanaerobacter acetatoxydans genus=Tepidanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
transcription elongation factor GreA; K03624 transcription elongation factor GreA
RBG_13_OP3_44_8_RBG_13_scaffold_9427_14

Not on your lists

comp(8089..8412)
DNA (324bp) protein (108aa)
Probable formate transporter n=2 Tax=Methanothermobacter thermautotrophicus RepID=FDHC_METTF
Marine sediment metagenome DNA, contig: S01H1_S29184 {ECO:0000313|EMBL:GAG30932.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
formate/nitrite transporter
Displaying 14 items

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