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RBG_13_OP3_44_8_RBG_13_scaffold_503

Search features with annotation key words

Displaying items 31-48 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_13_OP3_44_8_RBG_13_scaffold_503_31
Desulfotomaculum acetoxidans, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17979..18152)
DNA (174bp) protein (58aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Desulfotomaculum acetoxidans (strain ATCC 49208 / DSM 771 / VKM B-1644) RepID=C8W5Z7_DESAS
4Fe-4S ferredoxin
4Fe-4S ferredoxin iron-sulfur binding domain protein {ECO:0000313|EMBL:ACV61452.1}; TaxID=485916 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum acetoxidans (strain ATCC 49208 / DSM 771 / VKM; B-1644).;"
RBG_13_OP3_44_8_RBG_13_scaffold_503_32

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comp(18165..18539)
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Omnitrophica bacterium SCGC AAA252-B19 RepID=UPI000375AAD2
Dinitrogenase iron-molybdenum cofactor biosynthesis protein {ECO:0000313|EMBL:AEI30574.1}; TaxID=358574 species="unclassified sequences; environmental samples.;" source="uncultured microorganism.;"
dinitrogenase iron-molybdenum cofactor biosynthesis protein
RBG_13_OP3_44_8_RBG_13_scaffold_503_33

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comp(18872..19255)
DNA (384bp) protein (128aa)
hypothetical protein n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00036416F3
Marine sediment metagenome DNA, contig: S12H4_S10891 {ECO:0000313|EMBL:GAJ06892.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
RBG_13_OP3_44_8_RBG_13_scaffold_503_34

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comp(19384..19785)
DNA (402bp) protein (134aa)
Nitrogen-fixing NifU protein n=1 Tax=uncultured bacterium RepID=K2B687_9BACT
Nitrogen-fixing NifU protein {ECO:0000313|EMBL:EKD69186.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
nitrogen-fixing NifU domain-containing protein
RBG_13_OP3_44_8_RBG_13_scaffold_503_35
unknown

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comp(19782..19922)
DNA (141bp) protein (47aa)

This feature has no annotations

RBG_13_OP3_44_8_RBG_13_scaffold_503_36

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comp(19962..20408)
DNA (447bp) protein (149aa)
hypothetical protein n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI0003702F43
Marine sediment metagenome DNA, contig: S03H2_C00963 {ECO:0000313|EMBL:GAH27277.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
RBG_13_OP3_44_8_RBG_13_scaffold_503_37

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comp(20628..20879)
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XQI2_METZD
Marine sediment metagenome DNA, contig: S03H2_C01336 {ECO:0000313|EMBL:GAH30874.1}; Marine sediment metagenome DNA, contig: S03H2_C03049 {ECO:0000313|EMBL:GAH20082.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein; K09700 hypothetical protein
RBG_13_OP3_44_8_RBG_13_scaffold_503_38

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comp(20901..21278)
DNA (378bp) protein (126aa)
Dinitrogenase iron-molybdenum cofactor biosynthesis protein n=1 Tax=uncultured microorganism RepID=F8UHR7_9ZZZZ
Dinitrogenase iron-molybdenum cofactor biosynthesis protein {ECO:0000313|EMBL:AEI30574.1}; TaxID=358574 species="unclassified sequences; environmental samples.;" source="uncultured microorganism.;"
Dinitrogenase iron-molybdenum cofactor biosynthesis
RBG_13_OP3_44_8_RBG_13_scaffold_503_39

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comp(21280..21687)
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Omnitrophica bacterium SCGC AAA252-B19 RepID=UPI00037FF782
Dinitrogenase iron-molybdenum cofactor biosynthesis protein {ECO:0000313|EMBL:AEI30575.1}; TaxID=358574 species="unclassified sequences; environmental samples.;" source="uncultured microorganism.;"
dinitrogenase iron-molybdenum cofactor biosynthesis protein
RBG_13_OP3_44_8_RBG_13_scaffold_503_40

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comp(21763..22119)
DNA (357bp) protein (119aa)
Putative uncharacterized protein n=1 Tax=uncultured microorganism RepID=F8UHR9_9ZZZZ
Putative uncharacterized protein {ECO:0000313|EMBL:AEI30576.1}; TaxID=358574 species="unclassified sequences; environmental samples.;" source="uncultured microorganism.;"
hypothetical protein
RBG_13_OP3_44_8_RBG_13_scaffold_503_41

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comp(22278..22751)
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00036169B5
Marine sediment metagenome DNA, contig: S01H4_C00142 {ECO:0000313|EMBL:GAG65670.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
ferric uptake regulation protein; K03711 Fur family transcriptional regulator, ferric uptake regulator
RBG_13_OP3_44_8_RBG_13_scaffold_503_42
unknown

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22961..23074
DNA (114bp) protein (38aa)

This feature has no annotations

RBG_13_OP3_44_8_RBG_13_scaffold_503_43
unknown

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comp(23283..23495)
DNA (213bp) protein (71aa)

This feature has no annotations

RBG_13_OP3_44_8_RBG_13_scaffold_503_44
Clostridium sp. CAG:762, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23529..25106)
DNA (1578bp) protein (526aa)
asparagine synthase; K01953 asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
Asparagine synthetase n=1 Tax=Clostridium sp. CAG:762 RepID=R5TCV0_9CLOT
Asparagine synthetase {ECO:0000313|EMBL:CCZ56861.1}; TaxID=1262837 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:762.;"
RBG_13_OP3_44_8_RBG_13_scaffold_503_45
unknown

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comp(25550..25693)
DNA (144bp) protein (48aa)

This feature has no annotations

RBG_13_OP3_44_8_RBG_13_scaffold_503_46
unknown

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comp(25654..27342)
DNA (1689bp) protein (563aa)
glutaminyl-tRNA synthetase (EC:6.1.1.18); K01886 glutaminyl-tRNA synthetase [EC:6.1.1.18]
glutaminyl-tRNA synthetase n=1 Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B5A980
RBG_13_OP3_44_8_RBG_13_scaffold_503_47

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comp(27731..27988)
DNA (258bp) protein (86aa)
hypothetical protein n=1 Tax=unclassified candidate division KSB1 RepID=UPI000374EB6A
Marine sediment metagenome DNA, contig: S03H2_S03674 {ECO:0000313|EMBL:GAH60337.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
excinuclease ABC C subunit domain-containing protein; K07461 putative endonuclease
RBG_13_OP3_44_8_RBG_13_scaffold_503_48
unknown

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comp(29396..29920)
DNA (525bp) protein (175aa)
keto/oxoacid ferredoxin oxidoreductase subunit gamma; K00177 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
Pyruvate/ketoisovalerate oxidoreductase, gamma subunit id=3913221 bin=GWC2_OP3_44_8 species=unknown genus=Thermoanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
Displaying items 31-48 of 48 in total

View Taxonomy