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RBG_13_OP3_44_8_RBG_13_scaffold_503

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RBG_13_OP3_44_8_RBG_13_scaffold_503_1
unknown

Not on your lists

2..109
DNA (108bp) protein (36aa)

This feature has no annotations

RBG_13_OP3_44_8_RBG_13_scaffold_503_2
unknown

Not on your lists

comp(118..336)
DNA (219bp) protein (73aa)

This feature has no annotations

RBG_13_OP3_44_8_RBG_13_scaffold_503_3
Trichodesmium erythraeum, Trichodesmium, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(451..930)
DNA (480bp) protein (160aa)
TPR repeat n=1 Tax=Trichodesmium erythraeum (strain IMS101) RepID=Q118Y7_TRIEI
hypothetical protein
TPR repeat {ECO:0000313|EMBL:ABG49937.1}; TaxID=203124 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Trichodesmium.;" source="Trichodesmium erythraeum (strain IMS101).;"
RBG_13_OP3_44_8_RBG_13_scaffold_503_4
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(933..1640)
DNA (708bp) protein (236aa)
Cytochrome C biogenesis protein transmembrane region n=1 Tax=Finegoldia magna ACS-171-V-Col3 RepID=D9PR86_FINMA
Cytochrome C biogenesis protein transmembrane region {ECO:0000313|EMBL:EFK94035.1}; TaxID=768713 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna ACS-171-V-Col3.;"
cytochrome c biogenesis protein transmembrane region
RBG_13_OP3_44_8_RBG_13_scaffold_503_5

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comp(1637..2311)
DNA (675bp) protein (225aa)
Metallo-beta-lactamase superfamily protein id=4155951 bin=GWF2_Verrucomicrobia_51_19 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Verrucomicrobia_51_19 organism_group=Verrucomicrobia organism_desc=Good +
Marine sediment metagenome DNA, contig: S01H4_C01740 {ECO:0000313|EMBL:GAG72885.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
metallo-beta-lactamase superfamily protein; K06897
RBG_13_OP3_44_8_RBG_13_scaffold_503_6
unknown

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comp(2357..3091)
DNA (735bp) protein (245aa)
Zinc/iron permease id=3984120 bin=GWF2_OP3_43_52 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
zinc/iron permease
RBG_13_OP3_44_8_RBG_13_scaffold_503_7

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comp(3725..4207)
DNA (483bp) protein (161aa)
Putative methyltransferase, YaeB family n=1 Tax=Sporomusa ovata DSM 2662 RepID=T0JL29_9FIRM
Marine sediment metagenome DNA, contig: S01H1_S04518 {ECO:0000313|EMBL:GAF89253.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
RBG_13_OP3_44_8_RBG_13_scaffold_503_8
unknown

Not on your lists

comp(4435..5001)
DNA (567bp) protein (189aa)
Uncharacterized protein n=2 Tax=Geobacter metallireducens RepID=Q39ZE8_GEOMG
hypothetical protein
RBG_13_OP3_44_8_RBG_13_scaffold_503_9
Dictyoglomus turgidum, Dictyoglomus, Dictyoglomales, Dictyoglomia, Dictyoglomi, Bacteria

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comp(4991..5638)
DNA (648bp) protein (216aa)
hypothetical protein n=1 Tax=Omnitrophica bacterium SCGC AAA252-B19 RepID=UPI000381B00A
type 11 methyltransferase
Methyltransferase type 11 {ECO:0000313|EMBL:ACK41834.1}; TaxID=515635 species="Bacteria; Dictyoglomi; Dictyoglomales; Dictyoglomaceae; Dictyoglomus.;" source="Dictyoglomus turgidum (strain Z-1310 / DSM 6724).;"
RBG_13_OP3_44_8_RBG_13_scaffold_503_10
Kosmotoga olearia, Kosmotoga, Kosmotogales, Thermotogae, Thermotogae, Bacteria

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comp(5659..6693)
DNA (1035bp) protein (345aa)
Metallophosphoesterase n=1 Tax=Kosmotoga olearia (strain TBF 19.5.1) RepID=C5CDX7_KOSOT
metallophosphoesterase
Metallophosphoesterase {ECO:0000313|EMBL:ACR79146.1}; Flags: Precursor;; TaxID=521045 species="Bacteria; Thermotogae; Kosmotogales; Kosmotogaceae; Kosmotoga.;" source="Kosmotoga olearia (strain TBF 19.5.1).;"
RBG_13_OP3_44_8_RBG_13_scaffold_503_11
unknown

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comp(6730..7557)
DNA (828bp) protein (276aa)
hypothetical protein n=1 Tax=Omnitrophica bacterium SCGC AAA252-B19 RepID=UPI0003717FCE
polysaccharide deacetylase
RBG_13_OP3_44_8_RBG_13_scaffold_503_12
Syntrophobacter fumaroxidans, Syntrophobacter, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7575..8390)
DNA (816bp) protein (272aa)
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Omnitrophica bacterium SCGC AAA257-O07 RepID=UPI0003B59DF8
N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD
N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD {ECO:0000313|EMBL:ABK19433.1}; TaxID=335543 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophobacteraceae; Syntrophobacter.;" source="Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB).;"
RBG_13_OP3_44_8_RBG_13_scaffold_503_13

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comp(8390..8707)
DNA (318bp) protein (106aa)
hypothetical protein n=1 Tax=Omnitrophica bacterium SCGC AAA252-B19 RepID=UPI0003633B36
Marine sediment metagenome DNA, contig: S01H1_S20169 {ECO:0000313|EMBL:GAG27256.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
heat shock protein DnaJ domain-containing protein
RBG_13_OP3_44_8_RBG_13_scaffold_503_14

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comp(8724..9041)
DNA (318bp) protein (106aa)
Thioredoxin {ECO:0000313|EMBL:EFK95881.1}; EC=1.8.4.2 {ECO:0000313|EMBL:EFK95881.1};; TaxID=749907 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="sediment metagenome.;"
Thiol-disulfide isomerase and thioredoxin (EC:1.8.1.8); K03671 thioredoxin 1
Thioredoxin n=1 Tax=sediment metagenome RepID=D9PKL8_9ZZZZ
RBG_13_OP3_44_8_RBG_13_scaffold_503_15

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comp(9066..9380)
DNA (315bp) protein (105aa)
hypothetical protein n=1 Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B65B94
Marine sediment metagenome DNA, contig: S01H4_C03040 {ECO:0000313|EMBL:GAG71530.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
RBG_13_OP3_44_8_RBG_13_scaffold_503_16
unknown

Not on your lists

comp(9377..9736)
DNA (360bp) protein (120aa)
Uncharacterized protein id=4282356 bin=GWF2_OP3_43_52 species=Methanoculleus bourgensis genus=Methanoculleus taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
hypothetical protein
RBG_13_OP3_44_8_RBG_13_scaffold_503_17

Not on your lists

comp(9740..10453)
DNA (714bp) protein (238aa)
Metallo-beta-lactamase superfamily protein n=1 Tax=uncultured microorganism RepID=F8UHT7_9ZZZZ
Marine sediment metagenome DNA, contig: S01H4_C01740 {ECO:0000313|EMBL:GAG72885.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
beta-lactamase domain-containing protein; K06897
RBG_13_OP3_44_8_RBG_13_scaffold_503_18
unknown

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comp(10467..10880)
DNA (414bp) protein (138aa)
Transcriptional regulator, BadM/Rrf2 family id=4282518 bin=GWF2_OP3_43_52 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
BadM/Rrf2 family transcriptional regulator
RBG_13_OP3_44_8_RBG_13_scaffold_503_19

Not on your lists

comp(10932..11180)
DNA (249bp) protein (83aa)
hypothetical protein n=1 Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B7ADF5
Marine sediment metagenome DNA, contig: S01H4_C05503 {ECO:0000313|EMBL:GAG66752.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
fmdB; regulatory protein FmdB
RBG_13_OP3_44_8_RBG_13_scaffold_503_20

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comp(11183..11695)
DNA (513bp) protein (171aa)
peptide deformylase (EC:3.5.1.88); K01462 peptide deformylase [EC:3.5.1.88]
Peptide deformylase n=1 Tax=uncultured microorganism RepID=F8UHT8_9ZZZZ
Peptide deformylase {ECO:0000313|EMBL:AEI30595.1}; TaxID=358574 species="unclassified sequences; environmental samples.;" source="uncultured microorganism.;"
RBG_13_OP3_44_8_RBG_13_scaffold_503_21

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comp(11668..12564)
DNA (897bp) protein (299aa)
hypothetical protein n=1 Tax=Omnitrophica bacterium SCGC AAA252-B19 RepID=UPI0003669952
Putative uncharacterized protein {ECO:0000313|EMBL:AEI30596.1}; TaxID=358574 species="unclassified sequences; environmental samples.;" source="uncultured microorganism.;"
hypothetical protein; K09116 hypothetical protein
RBG_13_OP3_44_8_RBG_13_scaffold_503_22
unknown

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comp(12571..13347)
DNA (777bp) protein (259aa)
hypothetical protein n=1 Tax=Omnitrophica bacterium SCGC AAA252-B19 RepID=UPI000362F4C8
radical sam domain protein
RBG_13_OP3_44_8_RBG_13_scaffold_503_23

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comp(13328..14164)
DNA (837bp) protein (279aa)
ATP-binding protein n=1 Tax=Marinimicrobia bacterium JGI 0000039-D08 RepID=UPI0003B79D1E
Marine sediment metagenome DNA, contig: S01H4_C00096 {ECO:0000313|EMBL:GAG64209.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Cytosolic Fe-S cluster assembling factor NBP35
RBG_13_OP3_44_8_RBG_13_scaffold_503_24

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comp(14176..14802)
DNA (627bp) protein (209aa)
Protein containing DUF169 n=1 Tax=uncultured microorganism RepID=F8UHQ6_9ZZZZ
Protein containing DUF169 {ECO:0000313|EMBL:AEI30563.1}; TaxID=358574 species="unclassified sequences; environmental samples.;" source="uncultured microorganism.;"
RBG_13_OP3_44_8_RBG_13_scaffold_503_25

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comp(14808..15680)
DNA (873bp) protein (291aa)
hypothetical protein n=1 Tax=Omnitrophica bacterium SCGC AAA252-B19 RepID=UPI00037DB915
Iron-sulfur cluster-binding/ATPase domain-containing protein {ECO:0000313|EMBL:AEI30564.1}; TaxID=358574 species="unclassified sequences; environmental samples.;" source="uncultured microorganism.;"
cobyrinic acid ac-diamide synthase
RBG_13_OP3_44_8_RBG_13_scaffold_503_26

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comp(15677..16060)
DNA (384bp) protein (128aa)
CoA-binding domain-containing protein n=1 Tax=uncultured microorganism RepID=F8UHR2_9ZZZZ
CoA-binding domain-containing protein {ECO:0000313|EMBL:AEI30569.1}; TaxID=358574 species="unclassified sequences; environmental samples.;" source="uncultured microorganism.;"
CoA-binding domain-containing protein
RBG_13_OP3_44_8_RBG_13_scaffold_503_27

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comp(16044..16901)
DNA (858bp) protein (286aa)
hypothetical protein n=1 Tax=Omnitrophica bacterium SCGC AAA252-B19 RepID=UPI0003702461
Iron-sulfur cluster-binding/ATPase domain protein {ECO:0000313|EMBL:AEI30570.1}; TaxID=358574 species="unclassified sequences; environmental samples.;" source="uncultured microorganism.;"
Cobyrinic acid ac-diamide synthase
RBG_13_OP3_44_8_RBG_13_scaffold_503_28

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comp(16906..17556)
DNA (651bp) protein (217aa)
Methyltransferase type 11 domain-containing protein {ECO:0000313|EMBL:AEI30571.1}; EC=2.1.1.- {ECO:0000313|EMBL:AEI30571.1};; TaxID=358574 species="unclassified sequences; environmental samples.;" source="uncultured microorganism.;"
hypothetical protein n=1 Tax=Omnitrophica bacterium SCGC AAA252-B19 RepID=UPI0003744C0C
SmtA5; SAM-dependent methyltransferase
RBG_13_OP3_44_8_RBG_13_scaffold_503_29
unknown

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comp(17567..17758)
DNA (192bp) protein (64aa)

This feature has no annotations

RBG_13_OP3_44_8_RBG_13_scaffold_503_30
unknown

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comp(17838..17960)
DNA (123bp) protein (41aa)

This feature has no annotations

Displaying items 1-30 of 48 in total

View Taxonomy