Alias: ACD3_1474.24825.71
name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
ACD3_11_1
ACD3, Gracilibacteria, Bacteria
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Not on your lists |
comp(227..1669)
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hypothetical protein (db=KEGG evalue=7.0e-15 bit_score=85.9 identity=28.34 coverage=46.1538461538462)
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=199 to=472 evalue=1.5e-27)
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=195 to=382 evalue=5.4e-20)
AAA (db=HMMPfam db_id=PF00004 from=250 to=378 evalue=2.8e-17 interpro_id=IPR003959 interpro_description=ATPase, AAA-type, core GO=Molecular Function: ATP binding (GO:0005524))
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ACD3_11_2
ACD3, Gracilibacteria, Bacteria
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Not on your lists |
comp(2193..2468)
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transmembrane_regions (db=TMHMM db_id=tmhmm from=63 to=85)
transmembrane_regions (db=TMHMM db_id=tmhmm from=28 to=50)
transmembrane_regions 28..50 Tax=ACD3
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ACD3_11_3
uncultured bacterium (gcode 4), Bacteria
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Not on your lists |
2776..3855
|
peptide chain release factor 1
peptide chain release factor 1
Peptide chain release factor 1 n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CCP5_THET1 (db=UNIREF evalue=1.0e-83 bit_score=313.0 identity=49.43 coverage=96.1111111111111)
seg (db=Seg db_id=seg from=29 to=41)
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ACD3_11_4
unknown
|
Not on your lists |
4095..5462
|
regulator of chromosome condensation RCC1
Putative uncharacterized protein n=1 Tax=Achromobacter piechaudii ATCC 43553 RepID=D4XEW7_9BURK (db=UNIREF evalue=1.0e-32 bit_score=144.0 identity=43.22 coverage=41.0087719298246)
seg (db=Seg db_id=seg from=11 to=33)
seg (db=Seg db_id=seg from=110 to=119)
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ACD3_11_5
ACD3, Gracilibacteria, Bacteria
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Not on your lists |
5501..6970
|
regulator of chromosome condensation, RCC1 (db=KEGG evalue=1.0e-57 bit_score=227.0 identity=32.63 coverage=86.3265306122449)
seg (db=Seg db_id=seg from=306 to=323)
seg (db=Seg db_id=seg from=253 to=265)
seg (db=Seg db_id=seg from=196 to=208)
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ACD3_11_6
uncultured bacterium (gcode 4), Bacteria
|
Not on your lists |
comp(7071..8207)
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type II secretion system protein F
3-isopropylmalate dehydrogenase n=2 Tax=Neisseria RepID=C6M3E2_NEISI (db=UNIREF evalue=9.0e-35 bit_score=151.0 identity=27.6 coverage=91.0290237467018)
transmembrane_regions (db=TMHMM db_id=tmhmm from=123 to=145)
transmembrane_regions (db=TMHMM db_id=tmhmm from=170 to=192)
|
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ACD3_11_7
uncultured bacterium (gcode 4), Bacteria
|
Not on your lists |
8309..8740
|
Heat shock protein Hsp20 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D447_9BACT (db=UNIREF evalue=2.0e-09 bit_score=64.7 identity=35.11 coverage=63.8888888888889)
heat shock protein HSP20; K13993 HSP20 family protein (db=KEGG evalue=5.0e-09 bit_score=63.2 identity=40.0 coverage=63.8888888888889)
seg (db=Seg db_id=seg from=17 to=32)
HSP20-like chaperones (db=superfamily db_id=SSF49764 from=34 to=140 evalue=1.6e-19 interpro_id=IPR008978 interpro_description=HSP20-like chaperone)
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ACD3_11_8
ACD3, Gracilibacteria, Bacteria
|
Not on your lists |
8758..9057
|
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=37)
transmembrane_regions 20..37 Tax=ACD3
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ACD3_11_9
ACD3, Gracilibacteria, Bacteria
|
Not on your lists |
9045..9761
|
9045..9761 + (rbs_motif=TAA rbs_spacer=10bp)
hypothetical protein Tax=ACD3
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ACD3_11_10
ACD3, Gracilibacteria, Bacteria
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Not on your lists |
9785..10597
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ksgA; dimethyladenosine transferase (EC:2.1.1.-)
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=3 to=270 evalue=2.9e-45)
RrnaAD (db=HMMPfam db_id=PF00398 from=15 to=268 evalue=5.2e-40 interpro_id=IPR001737 interpro_description=Ribosomal RNA adenine methylase transferase GO=Biological Process: rRNA modification (GO:0000154), Molecular Function: rRNA (adenine-N6,N6-)-dimethyltransferase activity (GO:0000179), Molecular Function: rRNA methyltransferase activity (GO:0008649))
DIMETHYLADENOSINE TRANSFERASE (db=HMMPanther db_id=PTHR11727 from=5 to=269 evalue=3.8e-37 interpro_id=IPR001737 interpro_description=Ribosomal RNA adenine methylase transferase GO=Biological Process: rRNA modification (GO:0000154), Molecular Function: rRNA (adenine-N6,N6-)-dimethyltransferase activity (GO:0000179), Molecular Function: rRNA methyltransferase activity (GO:0008649))
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ACD3_11_11
ACD3, Gracilibacteria, Bacteria
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Not on your lists |
comp(10602..11630)
|
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=26)
seg (db=Seg db_id=seg from=114 to=146)
seg (db=Seg db_id=seg from=98 to=111)
seg (db=Seg db_id=seg from=38 to=57)
|
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ACD3_11_12
ACD3, Gracilibacteria, Bacteria
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Not on your lists |
comp(11609..12496)
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seg (db=Seg db_id=seg from=5 to=22)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
transmembrane_regions 5..27 Tax=ACD3
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ACD3_11_13
ACD3, Gracilibacteria, Bacteria
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Not on your lists |
comp(12603..15938)
|
seg (db=Seg db_id=seg from=1080 to=1092)
seg (db=Seg db_id=seg from=346 to=353)
seg (db=Seg db_id=seg from=241 to=250)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
|
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ACD3_11_14
unknown
|
Not on your lists |
comp(16001..17434)
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His-Xaa-Ser system radical SAM maturase HxsB
Putative arylsulfatase regulator n=1 Tax=Blautia hansenii DSM 20583 RepID=C9L3T3_RUMHA (db=UNIREF evalue=6.0e-66 bit_score=255.0 identity=34.9 coverage=93.7238493723849)
seg (db=Seg db_id=seg from=306 to=320)
Radical SAM enzymes (db=superfamily db_id=SSF102114 from=86 to=421 evalue=1.1e-24)
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ACD3_11_15
ACD3, Gracilibacteria, Bacteria
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Not on your lists |
comp(17424..17696)
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17424..17696 - (rbs_motif=TTA rbs_spacer=12bp)
hypothetical protein Tax=ACD3
|
|
ACD3_11_16
unknown
|
Not on your lists |
17712..18710
|
Putative uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FTI1_9CLOT (db=UNIREF evalue=2.0e-08 bit_score=63.5 identity=24.45 coverage=74.1741741741742)
seg (db=Seg db_id=seg from=269 to=289)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=24)
coiled-coil (db=Coil db_id=coil from=274 to=295 evalue=NA)
|
|
ACD3_11_17
ACD3, Gracilibacteria, Bacteria
|
Not on your lists |
18711..19643
|
hypothetical protein (db=KEGG evalue=2.0e-16 bit_score=90.1 identity=25.91 coverage=93.5691318327974)
Peptidase_U32 (db=HMMPfam db_id=PF01136 from=89 to=185 evalue=1.3e-20 interpro_id=IPR001539 interpro_description=Peptidase U32 GO=Biological Process: proteolysis (GO:0006508), Molecular Function: peptidase activity (GO:0008233))
hypothetical protein alias=ACD3_1474.24825.71G0017,ACD3_1474.24825.71_17,ACD3_C00011G00017 id=49663 tax=ACD3 species=Aromatoleum aromaticum genus=Aromatoleum taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria organism_group=BD1-5 organism_desc=BD1-5
hypothetical protein Tax=ACD3
|
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ACD3_11_18
ACD3, Gracilibacteria, Bacteria
|
Not on your lists |
19645..20442
|
seg (db=Seg db_id=seg from=158 to=174)
seg 158..174 Tax=ACD3
|
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ACD3_11_19
ACD3, Gracilibacteria, Bacteria
|
Not on your lists |
20417..21757
|
hemN; oxygen-independent coproporphyrinogen-III oxidase 1 (EC:1.3.99.22)
seg (db=Seg db_id=seg from=7 to=22)
Radical SAM enzymes (db=superfamily db_id=SSF102114 from=30 to=416 evalue=1.2e-61)
COPROPORPHYRINIGEN III OXIDASE (db=HMMPanther db_id=PTHR13932 from=70 to=430 evalue=2.2e-50)
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ACD3_11_20
ACD3, Gracilibacteria, Bacteria
|
Not on your lists |
21960..22454
|
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
transmembrane_regions 7..29 Tax=ACD3
|
|
ACD3_11_21
ACD3, Gracilibacteria, Bacteria
|
Not on your lists |
22481..23674
|
seg (db=Seg db_id=seg from=2 to=18)
seg (db=Seg db_id=seg from=26 to=34)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=20 evalue=7.0)
seg 2..18 Tax=ACD3
|
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ACD3_11_22
ACD3, Gracilibacteria, Bacteria
|
Not on your lists |
23686..24807
|
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=24)
seg (db=Seg db_id=seg from=8 to=19)
seg (db=Seg db_id=seg from=96 to=108)
transmembrane_regions 7..24 Tax=ACD3
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