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ACD3_23

Alias: ACD3_929.52894.71

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Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD3_23_1
ACD3, Gracilibacteria, Bacteria

Not on your lists

400..729
DNA (330bp) protein (110aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=91 to=108)
transmembrane_regions (db=TMHMM db_id=tmhmm from=36 to=55)
transmembrane_regions (db=TMHMM db_id=tmhmm from=9 to=31)
seg (db=Seg db_id=seg from=91 to=102)
ACD3_23_2
unknown

Not on your lists

comp(726..1589)
DNA (864bp) protein (288aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Ethanoligenens harbinense YUAN-3 RepID=D3NLK9_9FIRM (db=UNIREF evalue=6.0e-26 bit_score=121.0 identity=35.24 coverage=77.7777777777778)
seg (db=Seg db_id=seg from=7 to=18)
transmembrane_regions (db=TMHMM db_id=tmhmm from=228 to=250)
ACD3_23_3
ACD3, Gracilibacteria, Bacteria

Not on your lists

comp(1593..2291)
DNA (699bp) protein (233aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=205 to=227)
transmembrane_regions (db=TMHMM db_id=tmhmm from=178 to=200)
transmembrane_regions (db=TMHMM db_id=tmhmm from=143 to=165)
ACD3_23_4
ACD3, Gracilibacteria, Bacteria

Not on your lists

2315..2497
DNA (183bp) protein (61aa)
seg (db=Seg db_id=seg from=23 to=33)
seg 23..33 Tax=ACD3
ACD3_23_5
ACD3, Gracilibacteria, Bacteria

Not on your lists

2614..4311
DNA (1698bp) protein (566aa)
seg (db=Seg db_id=seg from=136 to=154)
seg 136..154 Tax=ACD3
ACD3_23_6
ACD3, Gracilibacteria, Bacteria

Not on your lists

comp(4410..6305)
DNA (1896bp) protein (632aa)
coiled-coil (db=Coil db_id=coil from=587 to=608 evalue=NA)
coiled-coil 587..608 Tax=ACD3
ACD3_23_7
ACD3, Gracilibacteria, Bacteria

Not on your lists

comp(6459..7088)
DNA (630bp) protein (210aa)
HD domain protein
seg (db=Seg db_id=seg from=182 to=198)
HD-domain/PDEase-like (db=superfamily db_id=SSF109604 from=4 to=185 evalue=2.3e-31)
no description (db=Gene3D db_id=G3DSA:1.10.3210.10 from=2 to=179 evalue=7.6e-27)
ACD3_23_8
unknown

Not on your lists

comp(7112..7651)
DNA (540bp) protein (180aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DFZ3_9EURY (db=UNIREF evalue=3.0e-22 bit_score=107.0 identity=34.78 coverage=96.6666666666667)
no description (db=Gene3D db_id=G3DSA:3.40.50.1820 from=3 to=176 evalue=3.9e-18)
DUF1234 (db=HMMPfam db_id=PF06821 from=5 to=159 evalue=6.8e-10 interpro_id=IPR010662 interpro_description=Protein of unknown function DUF1234)
ACD3_23_9
ACD3, Gracilibacteria, Bacteria

Not on your lists

comp(7663..8751)
DNA (1089bp) protein (363aa)
Protein kinase-like (PK-like) (db=superfamily db_id=SSF56112 from=114 to=320 evalue=1.5e-08 interpro_id=IPR011009 interpro_description=Protein kinase-like domain)
APH (db=HMMPfam db_id=PF01636 from=127 to=293 evalue=2.3e-08 interpro_id=IPR002575 interpro_description=Aminoglycoside phosphotransferase)
Protein kinase-like (PK-like) Tax=ACD3
ACD3_23_10
ACD3, Gracilibacteria, Bacteria

Not on your lists

comp(8883..9896)
DNA (1014bp) protein (338aa)
hypothetical protein; K09157 hypothetical protein (db=KEGG evalue=7.0e-11 bit_score=71.6 identity=28.57 coverage=59.4674556213018)
seg (db=Seg db_id=seg from=116 to=125)
DUF711 (db=HMMPfam db_id=PF05167 from=179 to=328 evalue=2.1e-07 interpro_id=IPR007841 interpro_description=Protein of unknown function DUF711)
hypothetical protein; K09157 hypothetical protein alias=ACD3_929.52894.71_10,ACD3_929.52894.71G0010,ACD3_C00023G00010 id=50034 tax=ACD3 species=Nostoc punctiforme genus=Nostoc taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria organism_group=BD1-5 organism_desc=BD1-5
ACD3_23_11
unknown

Not on your lists

comp(9912..10436)
DNA (525bp) protein (175aa)
Putative uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FRH5_9CLOT (db=UNIREF evalue=6.0e-11 bit_score=70.1 identity=34.23 coverage=81.7142857142857)
adenylate cyclase (db=KEGG evalue=2.0e-09 bit_score=65.1 identity=28.08 coverage=80.5714285714286)
seg (db=Seg db_id=seg from=2 to=13)
CYTH-like phosphatases (db=superfamily db_id=SSF55154 from=16 to=162 evalue=9.0e-11 interpro_id=IPR004206 interpro_description=mRNA capping enzyme, beta subunit GO=Molecular Function: polynucleotide 5'-phosphatase activity (GO:0004651), Molecular Function: protein binding (GO:0005515), Biological Process: mRNA capping (GO:0006370), Cellular Component: mRNA cap methyltransferase complex (GO:0031533))
ACD3_23_12
ACD3, Gracilibacteria, Bacteria

Not on your lists

10709..11464
DNA (756bp) protein (252aa)
Putative uncharacterized protein n=1 Tax=Geobacter sulfurreducens RepID=Q74FP4_GEOSL (db=UNIREF evalue=3.0e-81 bit_score=304.0 identity=69.7 coverage=78.1746031746032)
hypothetical protein
hypothetical protein
Dihydrofolate reductase-like (db=superfamily db_id=SSF53597 from=54 to=243 evalue=5.9e-31)
ACD3_23_13
ACD3, Gracilibacteria, Bacteria

Not on your lists

11563..12333
DNA (771bp) protein (257aa)
seg (db=Seg db_id=seg from=37 to=49)
seg (db=Seg db_id=seg from=203 to=215)
seg 37..49 Tax=ACD3
ACD3_23_14
ACD3, Gracilibacteria, Bacteria

Not on your lists

12529..16248
DNA (3720bp) protein (1240aa)
DNA MISMATCH REPAIR PROTEIN (db=KEGG evalue=9.0e-11 bit_score=73.6 identity=26.13 coverage=15.241935483871)
DNA MISMATCH REPAIR PROTEIN n=1 Tax=Encephalitozoon cuniculi RepID=Q8SSB0_ENCCU (db=UNIREF evalue=1.0e-10 bit_score=73.6 identity=26.13 coverage=15.241935483871)
seg (db=Seg db_id=seg from=963 to=973)
seg (db=Seg db_id=seg from=765 to=773)
ACD3_23_15
ACD3, Gracilibacteria, Bacteria

Not on your lists

comp(16303..18654)
DNA (2352bp) protein (784aa)
hypothetical protein
seg (db=Seg db_id=seg from=472 to=487)
seg (db=Seg db_id=seg from=265 to=281)
hypothetical protein alias=ACD3_C00023G00015,ACD3_929.52894.71G0015,ACD3_929.52894.71_15 id=50016 tax=ACD3 species=Chitinophaga pinensis genus=Chitinophaga taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes organism_group=BD1-5 organism_desc=BD1-5
ACD3_23_16
ACD3, Gracilibacteria, Bacteria

Not on your lists

18942..19391
DNA (450bp) protein (150aa)
hypothetical protein
Bet v1-like (db=superfamily db_id=SSF55961 from=1 to=147 evalue=1.2e-13)
AHSA1 (db=HMMPfam db_id=PF08327 from=12 to=144 evalue=9.6e-08 interpro_id=IPR013538 interpro_description=Activator of Hsp90 ATPase homologue 1-like GO=Biological Process: response to stress (GO:0006950))
hypothetical protein alias=ACD3_C00023G00016,ACD3_929.52894.71G0016,ACD3_929.52894.71_16 id=50011 tax=ACD3 species=Leptospira interrogans genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes organism_group=BD1-5 organism_desc=BD1-5
ACD3_23_17
ACD3, Gracilibacteria, Bacteria

Not on your lists

19994..20683
DNA (690bp) protein (230aa)
19994..20683 + (rbs_motif=None rbs_spacer=None)
hypothetical protein Tax=ACD3
ACD3_23_18
ACD3, Gracilibacteria, Bacteria

Not on your lists

comp(20753..22270)
DNA (1518bp) protein (506aa)
threonine synthase (EC:4.2.3.1)
Tryptophan synthase beta subunit-like PLP-dependent enzymes (db=superfamily db_id=SSF53686 from=1 to=471 evalue=8.4e-83 interpro_id=IPR001926 interpro_description=Pyridoxal phosphate-dependent enzyme, beta subunit GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: metabolic process (GO:0008152), Molecular Function: pyridoxal phosphate binding (GO:0030170))
no description (db=Gene3D db_id=G3DSA:3.40.50.1100 from=197 to=466 evalue=2.5e-61)
THREONINE SYNTHASE (db=HMMPanther db_id=PTHR10314:SF1 from=13 to=392 evalue=8.3e-38)
Forms threonine from homoserine Jill Banfield (11/15/12)
ACD3_23_19
ACD3, Gracilibacteria, Bacteria

Not on your lists

23245..23697
DNA (453bp) protein (151aa)
seg (db=Seg db_id=seg from=39 to=54)
seg 39..54 Tax=ACD3
ACD3_23_20
ACD3, Gracilibacteria, Bacteria

Not on your lists

23880..24890
DNA (1011bp) protein (337aa)
seg (db=Seg db_id=seg from=5 to=18)
seg 5..18 Tax=ACD3
ACD3_23_21
ACD3, Gracilibacteria, Bacteria

Not on your lists

comp(25033..27132)
DNA (2100bp) protein (700aa)
25033..27132 - (rbs_motif=TTA rbs_spacer=15bp)
hypothetical protein Tax=ACD3
ACD3_23_22
ACD3, Gracilibacteria, Bacteria

Not on your lists

comp(27328..27930)
DNA (603bp) protein (201aa)
27328..27930 - (rbs_motif=TTAA rbs_spacer=5bp)
hypothetical protein Tax=ACD3
ACD3_23_23
ACD3, Gracilibacteria, Bacteria

Not on your lists

comp(29008..30399)
DNA (1392bp) protein (464aa)
hypothetical protein
seg (db=Seg db_id=seg from=225 to=236)
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase (db=superfamily db_id=SSF55874 from=287 to=453 evalue=4.3e-25 interpro_id=IPR003594 interpro_description=ATPase-like, ATP-binding domain GO=Molecular Function: ATP binding (GO:0005524))
no description (db=Gene3D db_id=G3DSA:3.30.565.10 from=286 to=450 evalue=5.1e-20 interpro_id=IPR003594 interpro_description=ATPase-like, ATP-binding domain GO=Molecular Function: ATP binding (GO:0005524))
ACD3_23_24
ACD3, Gracilibacteria, Bacteria

Not on your lists

comp(30583..31308)
DNA (726bp) protein (242aa)
seg (db=Seg db_id=seg from=142 to=156)
seg 142..156 Tax=ACD3
ACD3_23_25
ACD3, Gracilibacteria, Bacteria

Not on your lists

31410..32510
DNA (1101bp) protein (367aa)
seg (db=Seg db_id=seg from=169 to=180)
seg 169..180 Tax=ACD3
ACD3_23_26
unknown

Not on your lists

comp(32524..34329)
DNA (1806bp) protein (602aa)
ABC transporter
Lipid A export ATP-binding/permease protein MsbA n=1 Tax=Leptotrichia goodfellowii F0264 RepID=D0GIB1_9FUSO (db=UNIREF evalue=6.0e-69 bit_score=266.0 identity=35.94 coverage=69.7674418604651)
transmembrane_regions (db=TMHMM db_id=tmhmm from=31 to=53)
seg (db=Seg db_id=seg from=78 to=91)
ACD3_23_27
ACD3, Gracilibacteria, Bacteria

Not on your lists

comp(34429..34611)
DNA (183bp) protein (61aa)
34429..34611 - (rbs_motif=TAA rbs_spacer=10bp)
hypothetical protein Tax=ACD3
ACD3_23_28
ACD3, Gracilibacteria, Bacteria

Not on your lists

34671..35120
DNA (450bp) protein (150aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=32)
seg (db=Seg db_id=seg from=16 to=33)
transmembrane_regions 10..32 Tax=ACD3
ACD3_23_29
ACD3, Gracilibacteria, Bacteria

Not on your lists

35651..36103
DNA (453bp) protein (151aa)
seg (db=Seg db_id=seg from=55 to=70)
seg 55..70 Tax=ACD3
ACD3_23_30
ACD3, Gracilibacteria, Bacteria

Not on your lists

comp(36200..36964)
DNA (765bp) protein (255aa)
36200..36964 - (rbs_motif=TTAA rbs_spacer=12bp)
hypothetical protein Tax=ACD3
Displaying items 1-30 of 43 in total

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