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ACD3_37

Alias: ACD3_650.25407.63

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD3_37_1
ACD3, Gracilibacteria, Bacteria

Not on your lists

comp(194..1012)
DNA (819bp) protein (273aa)
194..1012 - (rbs_motif=TAA rbs_spacer=10bp)
hypothetical protein Tax=ACD3
ACD3_37_2
ACD3, Gracilibacteria, Bacteria

Not on your lists

comp(1166..2029)
DNA (864bp) protein (288aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=269 to=286)
transmembrane_regions (db=TMHMM db_id=tmhmm from=240 to=262)
transmembrane_regions (db=TMHMM db_id=tmhmm from=213 to=235)
transmembrane_regions (db=TMHMM db_id=tmhmm from=179 to=201)
ACD3_37_3
ACD3, Gracilibacteria, Bacteria

Not on your lists

comp(2211..2456)
DNA (246bp) protein (82aa)
2211..2456 - (rbs_motif=TTAA rbs_spacer=10bp)
hypothetical protein Tax=ACD3
ACD3_37_4
unknown

Not on your lists

comp(2479..3093)
DNA (615bp) protein (205aa)
Putative uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=C0YIK6_9FLAO (db=UNIREF evalue=7.0e-12 bit_score=73.6 identity=51.43 coverage=33.1707317073171)
transmembrane_regions (db=TMHMM db_id=tmhmm from=75 to=94)
transmembrane_regions (db=TMHMM db_id=tmhmm from=51 to=70)
seg (db=Seg db_id=seg from=10 to=35)
ACD3_37_5
ACD3, Gracilibacteria, Bacteria

Not on your lists

comp(3335..3562)
DNA (228bp) protein (76aa)
3335..3562 - (rbs_motif=TTAA rbs_spacer=11bp)
hypothetical protein Tax=ACD3
ACD3_37_6
ACD3, Gracilibacteria, Bacteria

Not on your lists

comp(4123..5004)
DNA (882bp) protein (294aa)
hypothetical protein
hypothetical protein alias=ACD3_650.25407.63G0006,ACD3_650.25407.63_6,ACD3_C00037G00006 id=50420 tax=ACD3 species=Natrialba magadii genus=Natrialba taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota organism_group=BD1-5 organism_desc=BD1-5
hypothetical protein Tax=ACD3
ACD3_37_7
ACD3, Gracilibacteria, Bacteria

Not on your lists

5090..5302
DNA (213bp) protein (71aa)
5090..5302 + (rbs_motif=TTA rbs_spacer=15bp)
hypothetical protein Tax=ACD3
ACD3_37_8
ACD3, Gracilibacteria, Bacteria

Not on your lists

5324..6139
DNA (816bp) protein (272aa)
seg (db=Seg db_id=seg from=15 to=33)
seg 15..33 Tax=ACD3
ACD3_37_9
ACD3, Gracilibacteria, Bacteria

Not on your lists

6499..7581
DNA (1083bp) protein (361aa)
LcmA protein n=3 Tax=Listeria RepID=A0AFC7_LISW6 (db=UNIREF evalue=2.0e-84 bit_score=316.0 identity=47.9 coverage=94.7368421052632)
modification methylase
modification methylase
C5_MTASE_1 (db=PatternScan db_id=PS00094 from=78 to=90 evalue=0.0 interpro_id=IPR018117 interpro_description=DNA methylase, C-5 cytosine-specific, active site GO=Molecular Function: DNA binding (GO:0003677), Biological Process: DNA methylation (GO:0006306))
[cystine and] methionine Jill Banfield (11/15/12)
ACD3_37_10
ACD3, Gracilibacteria, Bacteria

Not on your lists

7600..9615
DNA (2016bp) protein (672aa)
hypothetical protein
coiled-coil (db=Coil db_id=coil from=34 to=55 evalue=NA)
seg (db=Seg db_id=seg from=368 to=383)
seg (db=Seg db_id=seg from=180 to=191)
ACD3_37_11
ACD3, Gracilibacteria, Bacteria

Not on your lists

9623..10603
DNA (981bp) protein (327aa)
seg (db=Seg db_id=seg from=97 to=108)
seg (db=Seg db_id=seg from=312 to=324)
seg 97..108 Tax=ACD3
ACD3_37_12
ACD3, Gracilibacteria, Bacteria

Not on your lists

10624..12240
DNA (1617bp) protein (539aa)
DNA methylase N-4/N-6 domain-containing protein
DNA methylase N-4/N-6 domain-containing protein
DNA methylase N-4/N-6 domain protein n=1 Tax=Pelodictyon phaeoclathratiforme BU-1 RepID=B4SCI7_PELPB (db=UNIREF evalue=5.0e-160 bit_score=568.0 identity=58.51 coverage=94.4341372912802)
seg (db=Seg db_id=seg from=518 to=529)
ACD3_37_13

Not on your lists

12231..14981
DNA (2751bp) protein (917aa)
type III restriction enzyme, res subunit
type III restriction enzyme, res subunit
Type III restriction enzyme, res subunit, putative n=1 Tax=Rhodospirillum centenum SW RepID=B6IQ08_RHOCS (db=UNIREF evalue=1.0e-164 bit_score=584.0 identity=38.35 coverage=96.0741548527808)
ResIII (db=HMMPfam db_id=PF04851 from=22 to=245 evalue=6.8e-23 interpro_id=IPR006935 interpro_description=Restriction endonuclease, type I, R subunit/Type III, Res subunit GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: ATP binding (GO:0005524), Molecular Function: hydrolase activity (GO:0016787))
ACD3_37_14
ACD3, Gracilibacteria, Bacteria

Not on your lists

comp(15291..15926)
DNA (636bp) protein (212aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
seg (db=Seg db_id=seg from=116 to=130)
seg (db=Seg db_id=seg from=6 to=23)
SLH (db=ProfileScan db_id=PS51272 from=138 to=196 evalue=6.402 interpro_id=IPR001119 interpro_description=S-layer homology domain)
ACD3_37_15
ACD3, Gracilibacteria, Bacteria

Not on your lists

16938..18209
DNA (1272bp) protein (424aa)
16938..18209 + (rbs_motif=TTAA rbs_spacer=10bp)
hypothetical protein Tax=ACD3
ACD3_37_16
ACD3, Gracilibacteria, Bacteria

Not on your lists

18264..18503
DNA (240bp) protein (80aa)
seg (db=Seg db_id=seg from=61 to=76)
seg 61..76 Tax=ACD3
ACD3_37_17
ACD3, Gracilibacteria, Bacteria

Not on your lists

18570..18845
DNA (276bp) protein (92aa)
18570..18845 + (rbs_motif=TTAA rbs_spacer=9bp)
hypothetical protein Tax=ACD3
ACD3_37_18
ACD3, Gracilibacteria, Bacteria

Not on your lists

18799..19065
DNA (267bp) protein (89aa)
18799..19065 + (rbs_motif=TAA rbs_spacer=9bp)
hypothetical protein Tax=ACD3
ACD3_37_19
ACD3, Gracilibacteria, Bacteria

Not on your lists

19614..19769
DNA (156bp) protein (52aa)
19614..19769 + (rbs_motif=TTAA rbs_spacer=14bp)
hypothetical protein Tax=ACD3
ACD3_37_20
ACD3, Gracilibacteria, Bacteria

Not on your lists

19821..21218
DNA (1398bp) protein (466aa)
glycyl-tRNA synthetase (EC:6.1.1.14)
glycyl-tRNA synthetase (EC:6.1.1.14)
Glycyl-tRNA synthetase n=1 Tax=Clostridium cellulolyticum H10 RepID=SYG_CLOCE (db=UNIREF evalue=1.0e-153 bit_score=546.0 identity=59.48 coverage=98.068669527897)
seg (db=Seg db_id=seg from=426 to=439)
ACD3_37_21
ACD3, Gracilibacteria, Bacteria

Not on your lists

21399..23057
DNA (1659bp) protein (553aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
seg (db=Seg db_id=seg from=13 to=46)
Pili subunits (db=superfamily db_id=SSF54523 from=13 to=137 evalue=1.8e-16)
IV_pilin_GFxxxE: prepilin-type N-term (db=HMMTigr db_id=TIGR02532 from=10 to=33 evalue=4.7e-06 interpro_id=IPR012902 interpro_description=Prepilin-type cleavage/methylation, N-terminal)
ACD3_37_22
ACD3, Gracilibacteria, Bacteria

Not on your lists

23566..24972
DNA (1407bp) protein (469aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=9 to=31)
seg (db=Seg db_id=seg from=9 to=30)
seg (db=Seg db_id=seg from=433 to=444)
seg (db=Seg db_id=seg from=343 to=357)
Displaying 22 items

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