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ACD49_13

Alias: ACD49_34411.23338.23

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD49_13_1
ACD49, Gracilibacteria, Bacteria

Not on your lists

comp(1084..1662)
DNA (579bp) protein (193aa)
seg (db=Seg db_id=seg from=72 to=91)
seg (db=Seg db_id=seg from=122 to=138)
seg 72..91 Tax=ACD49
ACD49_13_2
ACD49, Gracilibacteria, Bacteria

Not on your lists

2314..2502
DNA (189bp) protein (63aa)
2314..2502 + (rbs_motif=TTAA rbs_spacer=7bp)
hypothetical protein Tax=ACD49
ACD49_13_3
unknown

Not on your lists

2660..6139
DNA (3480bp) protein (1160aa)
Ankyrin repeat domain protein, putative n=1 Tax=Penicillium marneffei ATCC 18224 RepID=B6QCF1_PENMQ (db=UNIREF evalue=5.0e-35 bit_score=154.0 identity=24.46 coverage=63.1034482758621)
similar to ankyrin 2,3/unc44 (db=KEGG evalue=4.0e-28 bit_score=131.0 identity=22.01 coverage=67.3275862068966)
seg (db=Seg db_id=seg from=293 to=306)
seg (db=Seg db_id=seg from=441 to=453)
ACD49_13_4
ACD49, Gracilibacteria, Bacteria

Not on your lists

comp(6323..7282)
DNA (960bp) protein (320aa)
protein translocase subunit secF
transmembrane_regions (db=TMHMM db_id=tmhmm from=264 to=286)
transmembrane_regions (db=TMHMM db_id=tmhmm from=213 to=232)
transmembrane_regions (db=TMHMM db_id=tmhmm from=181 to=203)
ACD49_13_5
ACD49, Gracilibacteria, Bacteria

Not on your lists

7420..7833
DNA (414bp) protein (138aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=48 to=67)
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=38)
seg (db=Seg db_id=seg from=50 to=67)
seg 50..67 Tax=ACD49
ACD49_13_6
unknown

Not on your lists

7845..8570
DNA (726bp) protein (242aa)
hypothetical protein
hypothetical protein cdiviTM7_00582 n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B267C (db=UNIREF evalue=2.0e-29 bit_score=132.0 identity=35.0 coverage=86.7768595041322)
hypothetical protein cdiviTM7_00582 n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B267C Tax=ACD49
ACD49_13_7
ACD49, Gracilibacteria, Bacteria

Not on your lists

8570..8977
DNA (408bp) protein (136aa)
hypothetical protein
seg (db=Seg db_id=seg from=87 to=107)
Restriction endonuclease-like (db=superfamily db_id=SSF52980 from=26 to=128 evalue=5.7e-18 interpro_id=IPR011335 interpro_description=Restriction endonuclease, type II-like GO=Molecular Function: DNA binding (GO:0003677))
UPF0102 (db=HMMPfam db_id=PF02021 from=28 to=118 evalue=2.8e-15 interpro_id=IPR003509 interpro_description=Uncharacterised protein family UPF0102)
ACD49_13_8
ACD49, Gracilibacteria, Bacteria

Not on your lists

9069..9608
DNA (540bp) protein (180aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
seg (db=Seg db_id=seg from=21 to=38)
seg 21..38 Tax=ACD49
ACD49_13_9
ACD49, Gracilibacteria, Bacteria

Not on your lists

comp(9683..10057)
DNA (375bp) protein (125aa)
9683..10057 - (rbs_motif=TTTTAA rbs_spacer=3bp)
hypothetical protein Tax=ACD49
ACD49_13_10
ACD49, Gracilibacteria, Bacteria

Not on your lists

10206..13718
DNA (3513bp) protein (1171aa)
seg (db=Seg db_id=seg from=768 to=790)
seg (db=Seg db_id=seg from=664 to=681)
seg (db=Seg db_id=seg from=393 to=418)
coiled-coil (db=Coil db_id=coil from=532 to=553 evalue=NA)
ACD49_13_11
ACD49, Gracilibacteria, Bacteria

Not on your lists

13740..13901
DNA (162bp) protein (54aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=24)
seg (db=Seg db_id=seg from=5 to=24)
seg 5..24 Tax=ACD49
ACD49_13_12
ACD49, Gracilibacteria, Bacteria

Not on your lists

15055..16317
DNA (1263bp) protein (421aa)
seg (db=Seg db_id=seg from=250 to=264)
seg 250..264 Tax=ACD49
ACD49_13_13
ACD49, Gracilibacteria, Bacteria

Not on your lists

16409..17044
DNA (636bp) protein (212aa)
SOS-response transcriptional repressor, LexA (EC:3.4.21.88); K01356 repressor LexA [EC:3.4.21.88] (db=KEGG evalue=4.0e-16 bit_score=88.2 identity=28.7 coverage=98.1132075471698)
LexA/Signal peptidase (db=superfamily db_id=SSF51306 from=75 to=210 evalue=5.0e-16 interpro_id=IPR015927 interpro_description=Peptidase S24/S26A/S26B/S26C)
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=2 to=69 evalue=4.3e-10)
no description (db=Gene3D db_id=G3DSA:2.10.109.10 from=82 to=210 evalue=1.2e-09 interpro_id=IPR011056 interpro_description=Peptidase S24/S26A/S26B/S26C, beta-ribbon domain)
ACD49_13_14
ACD49, Gracilibacteria, Bacteria

Not on your lists

17062..17892
DNA (831bp) protein (277aa)
KilA/APSES-type HTH DNA-binding domain-containing protein
KilA/APSES-type HTH DNA-binding domain-containing protein
KilA domain protein n=1 Tax=bacterium S5 RepID=D3BY67_9BACT (db=UNIREF evalue=3.0e-91 bit_score=338.0 identity=60.66 coverage=96.7509025270758)
KilA-N (db=HMMPfam db_id=PF04383 from=15 to=139 evalue=2.0e-17 interpro_id=IPR018004 interpro_description=KilA, N-terminal/APSES-type HTH, DNA-binding)
ACD49_13_15
ACD49, Gracilibacteria, Bacteria

Not on your lists

17999..21886
DNA (3888bp) protein (1296aa)
nucH; thermonuclease NucH (EC:3.1.31.1)
seg (db=Seg db_id=seg from=972 to=995)
seg (db=Seg db_id=seg from=790 to=804)
seg (db=Seg db_id=seg from=685 to=698)
ACD49_13_16
ACD49, Gracilibacteria, Bacteria

Not on your lists

comp(21892..22428)
DNA (537bp) protein (179aa)
21892..22428 - (rbs_motif=TTTTAA rbs_spacer=12bp)
hypothetical protein Tax=ACD49
ACD49_13_17
ACD49, Gracilibacteria, Bacteria

Not on your lists

comp(22421..22681)
DNA (261bp) protein (87aa)
seg (db=Seg db_id=seg from=5 to=19)
seg 5..19 Tax=ACD49
ACD49_13_18
ACD49, Gracilibacteria, Bacteria

Not on your lists

22805..23272
DNA (468bp) protein (156aa)
seg (db=Seg db_id=seg from=17 to=35)
seg (db=Seg db_id=seg from=113 to=129)
transmembrane_regions (db=TMHMM db_id=tmhmm from=17 to=35)
transmembrane_regions (db=TMHMM db_id=tmhmm from=50 to=72)
Displaying 18 items

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