Alias: ACD80_18344.17313.23
name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
ACD80_17_1
ACD80, SR1, Bacteria
|
Not on your lists |
comp(3..4610)
|
coiled-coil (db=Coil db_id=coil from=1360 to=1381 evalue=NA)
seg (db=Seg db_id=seg from=157 to=171)
coiled-coil 1360..1381 Tax=ACD80
|
|
ACD80_17_2
unknown
|
Not on your lists |
5062..6261
|
Thermophilic metalloprotease (M29) superfamily
Thermophilic metalloprotease (M29) superfamily n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JFU9_9BACT (db=UNIREF evalue=8.0e-108 bit_score=394.0 identity=49.25 coverage=99.25)
seg (db=Seg db_id=seg from=126 to=137)
|
|
ACD80_17_3
ACD80, SR1, Bacteria
|
Not on your lists |
6282..6431
|
6282..6431 + (rbs_motif=TATTT rbs_spacer=13bp)
hypothetical protein Tax=ACD80
|
|
ACD80_17_4
unknown
|
Not on your lists |
comp(6576..7976)
|
Putative reverse transcriptase n=1 Tax=Vibrio mimicus MB-451 RepID=D0GZQ6_VIBMI (db=UNIREF evalue=9.0e-13 bit_score=79.0 identity=28.19 coverage=52.6766595289079)
putative reverse transcriptase (db=KEGG evalue=3.0e-11 bit_score=73.6 identity=31.43 coverage=34.9036402569593)
coiled-coil (db=Coil db_id=coil from=227 to=255 evalue=NA)
RVT_1 (db=HMMPfam db_id=PF00078 from=60 to=242 evalue=9.7e-17 interpro_id=IPR000477 interpro_description=RNA-directed DNA polymerase (reverse transcriptase) GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: RNA-directed DNA polymerase activity (GO:0003964), Biological Process: RNA-dependent DNA replication (GO:0006278))
|
|
ACD80_17_5
ACD80, SR1, Bacteria
|
Not on your lists |
8135..8476
|
8135..8476 + (rbs_motif=None rbs_spacer=None)
hypothetical protein Tax=ACD80
hypothetical protein
|
|
ACD80_17_6
ACD80, SR1, Bacteria
|
Not on your lists |
8734..10056
|
transmembrane_regions (db=TMHMM db_id=tmhmm from=369 to=391)
transmembrane_regions (db=TMHMM db_id=tmhmm from=396 to=418)
seg (db=Seg db_id=seg from=175 to=198)
seg (db=Seg db_id=seg from=311 to=325)
|
|
ACD80_17_7
ACD80, SR1, Bacteria
|
Not on your lists |
comp(10264..10704)
|
10264..10704 - (rbs_motif=TTAAT rbs_spacer=10bp)
hypothetical protein Tax=ACD80
|
|
ACD80_17_8
ACD80, SR1, Bacteria
|
Not on your lists |
comp(11137..11412)
|
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=43)
transmembrane_regions 21..43 Tax=ACD80
hypothetical protein
|
|
ACD80_17_9
ACD80, SR1, Bacteria
|
Not on your lists |
11542..12099
|
seg (db=Seg db_id=seg from=157 to=178)
seg (db=Seg db_id=seg from=4 to=16)
transmembrane_regions (db=TMHMM db_id=tmhmm from=158 to=180)
transmembrane_regions (db=TMHMM db_id=tmhmm from=121 to=143)
|
|
ACD80_17_10
ACD80, SR1, Bacteria
|
Not on your lists |
12196..12930
|
trmD; tRNA (guanine-N(1)-)-methyltransferase (EC:2.1.1.228)
seg (db=Seg db_id=seg from=227 to=243)
seg (db=Seg db_id=seg from=83 to=96)
trmD: tRNA (guanine-N1)-methyltransferase (db=HMMTigr db_id=TIGR00088 from=1 to=234 evalue=1.4e-73 interpro_id=IPR002649 interpro_description=tRNA (guanine-N1-)-methyltransferase, bacteria GO=Molecular Function: RNA binding (GO:0003723), Biological Process: tRNA processing (GO:0008033), Molecular Function: tRNA (guanine-N1-)-methyltransferase activity (GO:0009019))
|
|
ACD80_17_11
ACD80, SR1, Bacteria
|
Not on your lists |
13054..14202
|
UDP-Glycosyltransferase/glycogen phosphorylase (db=superfamily db_id=SSF53756 from=181 to=380 evalue=7.9e-14)
UDP-Glycosyltransferase/glycogen phosphorylase (db=superfamily db_id=SSF53756 from=4 to=159 evalue=2.2e-08)
Glycos_transf_1 (db=HMMPfam db_id=PF00534 from=4 to=141 evalue=7.1e-08 interpro_id=IPR001296 interpro_description=Glycosyl transferase, group 1 GO=Biological Process: biosynthetic process (GO:0009058))
GLYCOSYLTRANSFERASE (db=HMMPanther db_id=PTHR12526 from=181 to=380 evalue=6.2e-07)
|
|
ACD80_17_12
ACD80, SR1, Bacteria
|
Not on your lists |
14275..14808
|
seg (db=Seg db_id=seg from=5 to=16)
seg 5..16 Tax=ACD80
|
|
ACD80_17_13
ACD80, SR1, Bacteria
|
Not on your lists |
14827..15138
|
14827..15138 + (rbs_motif=None rbs_spacer=None)
hypothetical protein Tax=ACD80
|
|
ACD80_17_14
ACD80, SR1, Bacteria
|
Not on your lists |
comp(15284..16273)
|
hypothetical protein
hypothetical protein alias=ACD80_C00017G00014,ACD80_18344.17313.23G0014,ACD80_18344.17313.23_14 id=132282 tax=ACD80 species=Myxococcus xanthus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria organism_group=SR1
hypothetical protein Tax=ACD80
|
|
ACD80_17_15
ACD80, SR1, Bacteria
|
Not on your lists |
comp(16511..16738)
|
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
transmembrane_regions (db=TMHMM db_id=tmhmm from=45 to=67)
seg (db=Seg db_id=seg from=13 to=34)
transmembrane_regions 13..35 Tax=ACD80
|
|
ACD80_17_16
ACD80, SR1, Bacteria
|
Not on your lists |
comp(16884..17351)
|
coiled-coil (db=Coil db_id=coil from=77 to=112 evalue=NA)
coiled-coil 77..112 Tax=ACD80
hypothetical protein
|