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ACD80_48

Alias: ACD80_10605.7430.21

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD80_48_1
ACD80, SR1, Bacteria

Not on your lists

comp(104..724)
DNA (621bp) protein (207aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=25 to=47)
transmembrane_regions (db=TMHMM db_id=tmhmm from=51 to=73)
seg (db=Seg db_id=seg from=28 to=47)
seg (db=Seg db_id=seg from=165 to=176)
ACD80_48_2
ACD80, SR1, Bacteria

Not on your lists

comp(761..1009)
DNA (249bp) protein (83aa)
seg (db=Seg db_id=seg from=73 to=82)
RIBOSOMAL_L31 (db=PatternScan db_id=PS01143 from=36 to=58 evalue=0.0 interpro_id=IPR002150 interpro_description=Ribosomal protein L31 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Ribosomal_L31 (db=HMMPfam db_id=PF01197 from=1 to=66 evalue=3.5e-12 interpro_id=IPR002150 interpro_description=Ribosomal protein L31 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
L28p-like (db=superfamily db_id=SSF143800 from=1 to=72 evalue=9.2e-08)
ACD80_48_3
ACD80, SR1, Bacteria

Not on your lists

comp(1141..1644)
DNA (504bp) protein (168aa)
hypothetical protein
no description (db=HMMSmart db_id=SM00562 from=4 to=157 evalue=1.3e-40 interpro_id=IPR001564 interpro_description=Nucleoside diphosphate kinase, core GO=Molecular Function: nucleoside diphosphate kinase activity (GO:0004550), Molecular Function: ATP binding (GO:0005524), Biological Process: GTP biosynthetic process (GO:0006183), Biological Process: UTP biosynthetic process (GO:0006228), Biological Process: CTP biosynthetic process (GO:0006241))
Nucleoside diphosphate kinase, NDK (db=superfamily db_id=SSF54919 from=3 to=157 evalue=2.5e-40 interpro_id=IPR001564 interpro_description=Nucleoside diphosphate kinase, core GO=Molecular Function: nucleoside diphosphate kinase activity (GO:0004550), Molecular Function: ATP binding (GO:0005524), Biological Process: GTP biosynthetic process (GO:0006183), Biological Process: UTP biosynthetic process (GO:0006228), Biological Process: CTP biosynthetic process (GO:0006241))
NDK (db=HMMPfam db_id=PF00334 from=5 to=154 evalue=3.6e-37 interpro_id=IPR001564 interpro_description=Nucleoside diphosphate kinase, core GO=Molecular Function: nucleoside diphosphate kinase activity (GO:0004550), Molecular Function: ATP binding (GO:0005524), Biological Process: GTP biosynthetic process (GO:0006183), Biological Process: UTP biosynthetic process (GO:0006228), Biological Process: CTP biosynthetic process (GO:0006241))
ACD80_48_4
ACD80, SR1, Bacteria

Not on your lists

1959..3710
DNA (1752bp) protein (584aa)
hypothetical protein
seg (db=Seg db_id=seg from=453 to=469)
SLH (db=HMMPfam db_id=PF00395 from=83 to=117 evalue=0.00018 interpro_id=IPR001119 interpro_description=S-layer homology domain)
SLH (db=ProfileScan db_id=PS51272 from=277 to=340 evalue=6.983 interpro_id=IPR001119 interpro_description=S-layer homology domain)
ACD80_48_5
ACD80, SR1, Bacteria

Not on your lists

3760..4185
DNA (426bp) protein (142aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=42)
transmembrane_regions (db=TMHMM db_id=tmhmm from=111 to=133)
seg (db=Seg db_id=seg from=21 to=35)
transmembrane_regions 20..42 Tax=ACD80
ACD80_48_6
unknown

Not on your lists

4247..5188
DNA (942bp) protein (314aa)
Holliday junction ATP-dependent DNA helicase RuvB
Holliday junction ATP-dependent DNA helicase ruvB n=1 Tax=Caminibacter mediatlanticus TB-2 RepID=A6DEA3_9PROT (db=UNIREF evalue=2.0e-54 bit_score=216.0 identity=39.17 coverage=98.4076433121019)
HOLLIDAY JUNCTION DNA HELICASE RUVB (db=HMMPanther db_id=PTHR13779:SF2 from=22 to=310 evalue=7.4e-66)
HOLLIDAY JUNCTION DNA HELICASE RUVB-RELATED (db=HMMPanther db_id=PTHR13779 from=22 to=310 evalue=7.4e-66)
ACD80_48_7
ACD80, SR1, Bacteria

Not on your lists

5199..5426
DNA (228bp) protein (76aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=47 to=69)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=32)
transmembrane_regions 13..32 Tax=ACD80
hypothetical protein
ACD80_48_8
ACD80, SR1, Bacteria

Not on your lists

5520..6386
DNA (867bp) protein (289aa)
hypothetical protein
seg (db=Seg db_id=seg from=113 to=124)
hypothetical protein alias=ACD80_10605.7430.21G0008,ACD80_10605.7430.21_8,ACD80_C00048G00008 id=132642 tax=ACD80 species=Methanocella arvoryzae genus=Methanocella taxon_order=Methanocellales taxon_class=Methanomicrobia phylum=Euryarchaeota organism_group=SR1
hypothetical protein Tax=ACD80
ACD80_48_9
ACD80, SR1, Bacteria

Not on your lists

comp(6434..6787)
DNA (354bp) protein (118aa)
seg (db=Seg db_id=seg from=76 to=106)
seg 76..106 Tax=ACD80
ACD80_48_10
ACD80, SR1, Bacteria

Not on your lists

6834..7316
DNA (483bp) protein (161aa)
coiled-coil (db=Coil db_id=coil from=35 to=56 evalue=NA)
seg (db=Seg db_id=seg from=36 to=42)
coiled-coil 35..56 Tax=ACD80
Displaying 10 items

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