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ACD80_60

Alias: ACD80_62927.2848.4

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Displaying 4 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD80_60_1
unknown

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2..220
DNA (219bp) protein (73aa)
Phage integrase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J837_9FIRM (db=UNIREF evalue=3.0e-11 bit_score=70.5 identity=52.17 coverage=91.7808219178082)
integrase family protein
DNA breaking-rejoining enzymes (db=superfamily db_id=SSF56349 from=7 to=60 evalue=4.2e-07 interpro_id=IPR011010 interpro_description=DNA breaking-rejoining enzyme, catalytic core GO=Molecular Function: DNA binding (GO:0003677))
Phage_integrase (db=HMMPfam db_id=PF00589 from=4 to=49 evalue=6.9e-07 interpro_id=IPR002104 interpro_description=Integrase, catalytic core, phage GO=Molecular Function: DNA binding (GO:0003677), Biological Process: DNA recombination (GO:0006310), Biological Process: DNA integration (GO:0015074))
ACD80_60_2
ACD80, SR1, Bacteria

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213..1232
DNA (1020bp) protein (340aa)
integrase family protein
seg (db=Seg db_id=seg from=325 to=338)
DNA breaking-rejoining enzymes (db=superfamily db_id=SSF56349 from=118 to=310 evalue=5.9e-24 interpro_id=IPR011010 interpro_description=DNA breaking-rejoining enzyme, catalytic core GO=Molecular Function: DNA binding (GO:0003677))
no description (db=Gene3D db_id=G3DSA:1.10.443.10 from=110 to=310 evalue=1.1e-19 interpro_id=IPR013762 interpro_description=Integrase-like, catalytic core, phage GO=Molecular Function: DNA binding (GO:0003677), Biological Process: DNA recombination (GO:0006310), Biological Process: DNA integration (GO:0015074))
ACD80_60_3
unknown

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1961..2281
DNA (321bp) protein (107aa)
Site-specific recombinase XerD n=1 Tax=Coprococcus catus GD/7 RepID=D4J4V8_9FIRM (db=UNIREF evalue=4.0e-34 bit_score=146.0 identity=61.32 coverage=98.1308411214953)
Site-specific recombinase XerD
DNA breaking-rejoining enzymes (db=superfamily db_id=SSF56349 from=1 to=83 evalue=6.5e-17 interpro_id=IPR011010 interpro_description=DNA breaking-rejoining enzyme, catalytic core GO=Molecular Function: DNA binding (GO:0003677))
no description (db=Gene3D db_id=G3DSA:1.10.443.10 from=1 to=79 evalue=2.2e-13 interpro_id=IPR013762 interpro_description=Integrase-like, catalytic core, phage GO=Molecular Function: DNA binding (GO:0003677), Biological Process: DNA recombination (GO:0006310), Biological Process: DNA integration (GO:0015074))
ACD80_60_4
ACD80, SR1, Bacteria

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comp(2702..2881)
DNA (180bp) protein (60aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=6 to=28)
seg (db=Seg db_id=seg from=1 to=32)
transmembrane_regions 6..28 Tax=ACD80
Displaying 4 items

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