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ERMLT700_curated_scaffold_1216

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMLT700_curated_scaffold_1216_1
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

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comp(3..617)
-----------------
DNA (615bp)
protein (205aa)
hypothetical protein n=1 Tax=Schlesneria paludicola RepID=UPI00029ABADD
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
ERMLT700_curated_scaffold_1216_2
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(866..1711)
-----------------
DNA (846bp)
protein (282aa)
Methyltransferase type 11 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TI85_NIAKG
type 11 methyltransferase
Methyltransferase type 11 {ECO:0000313|EMBL:KIC91553.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
ERMLT700_curated_scaffold_1216_3
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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1972..2619
-----------------
DNA (648bp)
protein (216aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037DFAE8
type 11 methyltransferase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
ERMLT700_curated_scaffold_1216_4
unknown

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comp(2642..2968)
-----------------
DNA (327bp)
protein (109aa)

This feature has no annotations

ERMLT700_curated_scaffold_1216_5
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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3048..5354
-----------------
DNA (2307bp)
protein (769aa)
Multimodular transpeptidase-transglycosylase id=24529115 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
penicillin-binding protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
ERMLT700_curated_scaffold_1216_6
R_Acidobacteria_68_18, Acidobacteria, Bacteria

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5439..6518
-----------------
DNA (1080bp)
protein (360aa)
DNA polymerase III subunit delta' (EC:2.7.7.7); K02341 DNA polymerase III subunit delta' [EC:2.7.7.7] id=12555652 bin=CNBR_ACIDO species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
DNA polymerase III subunit delta'
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_1216_7
Crocosphaera watsonii, Crocosphaera, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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6592..7569
-----------------
DNA (978bp)
protein (326aa)
Uncharacterized protein n=1 Tax=Crocosphaera watsonii WH 8501 RepID=Q4BYF1_CROWT
Uncharacterized protein {ECO:0000313|EMBL:EAM48934.1}; TaxID=165597 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Crocosphaera.;" source="Crocosphaera watsonii WH 8501.;"
hypothetical protein
ERMLT700_curated_scaffold_1216_8
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

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7679..8626
-----------------
DNA (948bp)
protein (316aa)
Ig-like, group 1 n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21UB8_RHOFD
Ig-like protein, group 1
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
ERMLT700_curated_scaffold_1216_9

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8871..11729
-----------------
DNA (2859bp)
protein (953aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium 92 RepID=E3T6C4_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:ADC35868.1}; TaxID=698394 species="Bacteria; environmental samples.;" source="uncultured bacterium 92.;"
peptidase M10A and M12B, matrixin and adamalysin
ERMLT700_curated_scaffold_1216_10
unknown

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11726..12190
-----------------
DNA (465bp)
protein (155aa)

This feature has no annotations

ERMLT700_curated_scaffold_1216_11
R_Acidobacteria_68_18, Acidobacteria, Bacteria

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12237..13127
-----------------
DNA (891bp)
protein (297aa)
pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase (EC:1.1.1.262); K00097 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262] id=12555651 bin=CNBR_ACIDO species=Rhizobium giardinii genus=Rhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
4-hydroxythreonine-4-phosphate dehydrogenase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
Displaying 11 items

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