ggKbase home page

ERMLT700_curated_scaffold_1602

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMLT700_curated_scaffold_1602_1
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(3..113)
-----------------
DNA (111bp)
protein (37aa)
elongation factor Tu
translation elongation factor Tu id=12555603 bin=CNBR_ACIDO species=Hyphomicrobium denitrificans genus=Hyphomicrobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_1602_trna_4
unknown

Not on your lists

comp(202..274)
-----------------
DNA (73bp)
transferRNA Thr
ERMLT700_curated_scaffold_1602_trna_3
unknown

Not on your lists

comp(333..404)
-----------------
DNA (72bp)
transferRNA Gly
ERMLT700_curated_scaffold_1602_trna_2
unknown

Not on your lists

comp(480..568)
-----------------
DNA (89bp)
transferRNA Tyr
ERMLT700_curated_scaffold_1602_trna_1
unknown

Not on your lists

comp(729..802)
-----------------
DNA (74bp)
transferRNA Thr
ERMLT700_curated_scaffold_1602_2
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(861..1580)
-----------------
DNA (720bp)
protein (240aa)
RNA methyltransferase, TrmH family, group 3; K03218 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] id=12555604 bin=CNBR_ACIDO species=Acidobacterium capsulatum genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
rRNA methylase (EC:2.1.1.-)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_1602_3
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(1577..3094)
-----------------
DNA (1518bp)
protein (506aa)
glutamyl-tRNA synthetase / glutamate--tRNA(Gln) ligase; K01885 glutamyl-tRNA synthetase [EC:6.1.1.17] id=12555605 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
glutamyl-tRNA synthetase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_1602_4
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(3109..4269)
-----------------
DNA (1161bp)
protein (387aa)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; K12506 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:2.7.7.60 4.6.1.12] id=12555606 bin=CNBR_ACIDO species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:2.7.7.60 4.6.1.12)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_1602_5
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(4390..5394)
-----------------
DNA (1005bp)
protein (335aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium CSLG7 RepID=G4WV34_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
ERMLT700_curated_scaffold_1602_6
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(5453..6088)
-----------------
DNA (636bp)
protein (212aa)
Uncharacterized protein n=2 Tax=Brevibacillus RepID=J2R077_9BACL id=5224585 bin=16ft_combo_ws3_JS1 species=unknown genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_1602_7
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(6085..6909)
-----------------
DNA (825bp)
protein (275aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase (EC:2.3.1.51); K00655 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] id=12555607 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
1-acyl-sn-glycerol-3-phosphate acyltransferase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_1602_8
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(7005..8102)
-----------------
DNA (1098bp)
protein (366aa)
PilT protein-like id=12555608 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
twitching motility protein PilT
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_1602_9
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(8178..9515)
-----------------
DNA (1338bp)
protein (446aa)
DNA repair protein RadA; K04485 DNA repair protein RadA/Sms id=12555609 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
DNA repair protein RadA
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
Displaying 13 items

View Taxonomy