ggKbase home page

ERMLT700_curated_scaffold_39

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMLT700_curated_scaffold_39_1
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(120..767)
-----------------
DNA (648bp)
protein (216aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_39_2
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(841..1353)
-----------------
DNA (513bp)
protein (171aa)
Uncharacterized protein id=2882058 bin=GWA1_Deltaproteobacteria_52_35 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
ERMLT700_curated_scaffold_39_3
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

1542..2282
-----------------
DNA (741bp)
protein (247aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium RepID=E4WMG7_9BACT
short-chain dehydrogenase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_39_4
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(2283..3014)
-----------------
DNA (732bp)
protein (244aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000366061C
Rieske (2Fe-2S) oxidoreductase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
ERMLT700_curated_scaffold_39_5
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(3119..3976)
-----------------
DNA (858bp)
protein (286aa)
id=12554707 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_39_6
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(3976..6195)
-----------------
DNA (2220bp)
protein (740aa)
dipeptidyl aminopeptidase/acylaminoacyl-peptidase (EC:3.4.14.5)
Dipeptidyl aminopeptidase/acylaminoacyl-peptidase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LGB5_CHLTF
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_39_7
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

6215..8158
-----------------
DNA (1944bp)
protein (648aa)
Peptidase family M49 n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DJ50_SINAD
Peptidase family M49
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
ERMLT700_curated_scaffold_39_8
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

8127..9284
-----------------
DNA (1158bp)
protein (386aa)
aminotransferase (EC:2.6.1.-)
Putative aminotransferase class I and II n=1 Tax=uncultured marine microorganism HF4000_APKG10H12 RepID=B3TC91_9ZZZZ
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_39_9
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

9340..10929
-----------------
DNA (1590bp)
protein (530aa)
4-alpha-glucanotransferase n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IMP2_ANADE
4-alpha-glucanotransferase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_39_10
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(10975..12681)
-----------------
DNA (1707bp)
protein (569aa)
glnS; glutaminyl-tRNA synthetase (EC:6.1.1.18)
Glutamine--tRNA ligase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P853_9BACT
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_39_11
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(12689..14059)
-----------------
DNA (1371bp)
protein (457aa)
hypothetical protein n=1 Tax=Desulfurispora thermophila RepID=UPI0003703D65
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_39_12
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

14221..15228
-----------------
DNA (1008bp)
protein (336aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
ERMLT700_curated_scaffold_39_13
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(15259..17670)
-----------------
DNA (2412bp)
protein (804aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01ZI5_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ84930.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
ERMLT700_curated_scaffold_39_14
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

17730..18947
-----------------
DNA (1218bp)
protein (406aa)
hypothetical protein id=12554457 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_39_15
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

18996..20216
-----------------
DNA (1221bp)
protein (407aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI0003809D14
D-isomer specific 2-hydroxyacid dehydrogenase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_39_16
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

20240..21331
-----------------
DNA (1092bp)
protein (364aa)
serC; Phosphoserine aminotransferase; K00831 phosphoserine aminotransferase [EC:2.6.1.52] id=12554458 bin=CNBR_ACIDO species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
serC; phosphoserine aminotransferase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_39_17
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(21370..22671)
-----------------
DNA (1302bp)
protein (434aa)
Putative Poly A polymerase family protein n=1 Tax=uncultured marine microorganism HF4000_APKG10H12 RepID=B3TC84_9ZZZZ
poly(A) polymerase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_39_18
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

22716..23591
-----------------
DNA (876bp)
protein (292aa)
id=12556023 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_39_19
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(23683..26397)
-----------------
DNA (2715bp)
protein (905aa)
Putative DNA polymerase family A n=1 Tax=uncultured marine microorganism HF4000_APKG10H12 RepID=B3TC83_9ZZZZ
DNA polymerase I
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_39_20
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

26476..27219
-----------------
DNA (744bp)
protein (248aa)
id=12554461 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_39_21
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(27326..27868)
-----------------
DNA (543bp)
protein (181aa)
Putative phospholipid-binding domain protein n=1 Tax=uncultured marine microorganism HF4000_APKG10H12 RepID=B3TC81_9ZZZZ
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_39_22
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(28048..28779)
-----------------
DNA (732bp)
protein (244aa)
zinc/iron permease id=12554463 bin=CNBR_ACIDO species=Methylomicrobium alcaliphilum genus=Methylomicrobium taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
zinc/iron permease
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_39_23
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(28825..29913)
-----------------
DNA (1089bp)
protein (363aa)
Putative von Willebrand factor type A domain protein n=1 Tax=uncultured marine microorganism HF4000_APKG10H12 RepID=B3TC79_9ZZZZ
von Willebrand factor, type A
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_39_24
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(29918..30613)
-----------------
DNA (696bp)
protein (232aa)
Putative uncharacterized protein n=1 Tax=uncultured marine microorganism HF4000_APKG10H12 RepID=B3TC78_9ZZZZ
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
ERMLT700_curated_scaffold_39_25
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(30626..31708)
-----------------
DNA (1083bp)
protein (361aa)
TonB-like protein id=12554190 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
TonB family protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
ERMLT700_curated_scaffold_39_26
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(31838..32395)
-----------------
DNA (558bp)
protein (186aa)
Putative uncharacterized protein n=1 Tax=uncultured marine microorganism HF4000_APKG10H12 RepID=B3TC76_9ZZZZ
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_39_27
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

32471..33739
-----------------
DNA (1269bp)
protein (423aa)
Myo-inositol-1-phosphate synthase (EC:5.5.1.4)
Putative Myo-inositol-1-phosphate synthase n=1 Tax=uncultured marine microorganism HF4000_APKG10H12 RepID=B3TC75_9ZZZZ
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_39_28

Not on your lists

33736..34212
-----------------
DNA (477bp)
protein (159aa)
Putative uncharacterized protein n=1 Tax=uncultured marine microorganism HF4000_APKG10H12 RepID=B3TC74_9ZZZZ
Putative uncharacterized protein {ECO:0000313|EMBL:ABZ10183.1}; TaxID=455560 species="unclassified sequences; environmental samples.;" source="uncultured marine microorganism HF4000_APKG10H12.;"
hypothetical protein
ERMLT700_curated_scaffold_39_29
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

34266..36233
-----------------
DNA (1968bp)
protein (656aa)
acs; acetyl-coenzyme A synthetase (EC:6.2.1.1); K01895 acetyl-CoA synthetase [EC:6.2.1.1] id=12554467 bin=CNBR_ACIDO species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Acetyl-coenzyme A synthetase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
ERMLT700_curated_scaffold_39_30
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

36294..37010
-----------------
DNA (717bp)
protein (239aa)
Putative ABC transporter n=1 Tax=uncultured marine microorganism HF4000_APKG10H12 RepID=B3TC73_9ZZZZ
antimicrobial peptide ABC transporter ATPase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
Displaying items 1-30 of 57 in total

View Taxonomy