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ERMLT700_curated_scaffold_43

Search features with annotation key words

Displaying items 31-57 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMLT700_curated_scaffold_43_31
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

31815..32642
-----------------
DNA (828bp)
protein (276aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_43_32
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

32656..33132
-----------------
DNA (477bp)
protein (159aa)
hypothetical protein id=16912676 bin=RBG_16_Aminicenantes_63_16_plus species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_63_16_plus organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate Resolve three similar GC_Cov Aminicentantes bins with ESOM
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_43_33
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

33132..34535
-----------------
DNA (1404bp)
protein (468aa)
amino acid transporter n=1 Tax=Aminicenantes bacterium SCGC AAA252-K06 RepID=UPI0003B614F8
amino acid permease
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_43_34
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(34588..35541)
-----------------
DNA (954bp)
protein (318aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium 259 RepID=E3T6S1_9BACT
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_43_35
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

35746..36222
-----------------
DNA (477bp)
protein (159aa)
ATP dependent peptidase subunit CodW; K01419 ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] id=12555772 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ATP-dependent protease peptidase subunit
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_43_36
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

36318..37712
-----------------
DNA (1395bp)
protein (465aa)
hslU; ATP-dependent protease ATP-binding subunit HslU; K03667 ATP-dependent HslUV protease ATP-binding subunit HslU id=12555773 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hslU; ATP-dependent protease ATP-binding subunit HslU
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_43_37
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

38049..39674
-----------------
DNA (1626bp)
protein (542aa)
Nitrogenase (Molybdenum-iron)-specific transcriptional regulator NifA n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PL86_9DELT
Nif-specific regulatory protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_43_38
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

39741..41126
-----------------
DNA (1386bp)
protein (462aa)
hypothetical protein id=12555774 bin=CNBR_ACIDO species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Fibronectin type III domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_43_39
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

41138..41791
-----------------
DNA (654bp)
protein (218aa)
putative translaldolase (EC:2.2.1.2); K00616 transaldolase [EC:2.2.1.2] id=12555776 bin=CNBR_ACIDO species=Methanocaldococcus vulcanius genus=Methanocaldococcus taxon_order=Methanococcales taxon_class=Methanococci phylum=Euryarchaeota tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
putative translaldolase (EC:2.2.1.2)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_43_40
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

41811..43352
-----------------
DNA (1542bp)
protein (514aa)
Putative propionyl-CoA carboxylase beta chain id=4092233 bin=GWA2_Methylomirabilis_73_35 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
carboxyl transferase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_43_41
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

43360..44916
-----------------
DNA (1557bp)
protein (519aa)
accC; acetyl CoA carboxylase, biotin carboxylase subunit (EC:6.3.4.14)
acetyl-CoA carboxylase, biotin carboxylase id=12555778 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_43_42
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

44913..45428
-----------------
DNA (516bp)
protein (172aa)
Biotin/lipoic acid binding domain protein id=3942855 bin=GWC2_Proteo_65_14_Ab886 species=Myxococcus stipitatus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
biotin/lipoyl attachment domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_43_43
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

45593..49636
-----------------
DNA (4044bp)
protein (1348aa)
hypothetical protein; K09800 hypothetical protein id=12555780 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_43_44
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

49636..52650
-----------------
DNA (3015bp)
protein (1005aa)
surface antigen id=12555781 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
surface antigen
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_43_45
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

52719..53348
-----------------
DNA (630bp)
protein (210aa)
peptidil-prolyl cis-trans isomerase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_43_46
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(53323..54309)
-----------------
DNA (987bp)
protein (329aa)
Quinone oxidoreductase n=1 Tax=Cupriavidus sp. HPC(L) RepID=V2KE19_9BURK
zinc-containing alcohol dehydrogenase superfamily protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
ERMLT700_curated_scaffold_43_47
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(54428..55249)
-----------------
DNA (822bp)
protein (274aa)
id=12555789 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_43_48
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

55349..56755
-----------------
DNA (1407bp)
protein (469aa)
response regulator in two-component regulatory system, sigma 54-dependent id=12556020 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
response regulator in two-component regulatory system, sigma 54-dependent
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_43_49
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

56886..58739
-----------------
DNA (1854bp)
protein (618aa)
Multi-sensor signal transduction histidine kinase (EC:2.7.3.-) id=12556021 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
multi-sensor signal transduction histidine kinase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_43_50
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

58741..59346
-----------------
DNA (606bp)
protein (202aa)
id=12556022 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
infB; translation initiation factor IF-2
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_43_51
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

59530..60174
-----------------
DNA (645bp)
protein (215aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003800173
regulatory protein TetR
Regulatory protein TetR {ECO:0000313|EMBL:AHG89317.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
ERMLT700_curated_scaffold_43_52
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

60171..61490
-----------------
DNA (1320bp)
protein (440aa)
outer membrane efflux protein
Outer membrane efflux protein {ECO:0000313|EMBL:AHG89316.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Outer membrane efflux protein id=1714577 bin=GWB2_Ignavibacteria_35_12 species=Chloroherpeton thalassium genus=Chloroherpeton taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
ERMLT700_curated_scaffold_43_53
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

61490..62578
-----------------
DNA (1089bp)
protein (363aa)
UPF0194 membrane protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GF17_9BACT
putative ABC transport system, lipoprotein
Putative ABC transport system, lipoprotein {ECO:0000313|EMBL:AHG89315.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
ERMLT700_curated_scaffold_43_54
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

62575..63582
-----------------
DNA (1008bp)
protein (336aa)
ABC transporter related protein n=1 Tax=Prosthecochloris vibrioformis (strain DSM 265) RepID=A4SEG6_PROVI
ABC transporter related protein
ABC transporter related protein {ECO:0000313|EMBL:AHG89314.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
ERMLT700_curated_scaffold_43_55
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

63579..64376
-----------------
DNA (798bp)
protein (266aa)
ATPase n=1 Tax=Pelodictyon luteolum (strain DSM 273) RepID=Q3B3Y9_PELLD
ABC transporter related protein
ABC transporter related protein {ECO:0000313|EMBL:AHG89313.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
ERMLT700_curated_scaffold_43_56
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

64373..65512
-----------------
DNA (1140bp)
protein (380aa)
ABC-2 n=1 Tax=Chlorobium ferrooxidans DSM 13031 RepID=Q0YSW5_9CHLB
ABC-2 type transporter
ABC-2 type transporter {ECO:0000313|EMBL:AHG89312.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
ERMLT700_curated_scaffold_43_57
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

65515..66252
-----------------
DNA (738bp)
protein (246aa)
ABC-2 type transporter n=1 Tax=Prosthecochloris vibrioformis (strain DSM 265) RepID=A4SEG9_PROVI
putative ABC transport system, membrane protein
Putative ABC transport system, membrane protein {ECO:0000313|EMBL:AHG89311.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Displaying items 31-57 of 57 in total

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