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ERMLT700_curated_scaffold_56

Search features with annotation key words

Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMLT700_curated_scaffold_56_1
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

100..1146
-----------------
DNA (1047bp)
protein (349aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
ERMLT700_curated_scaffold_56_2
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

1162..2358
-----------------
DNA (1197bp)
protein (399aa)
id=12554715 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_56_3
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

2415..3632
-----------------
DNA (1218bp)
protein (406aa)
Uncharacterized protein n=1 Tax=Pseudomonas stutzeri CCUG 29243 RepID=I4CZE5_PSEST
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_56_4
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

3776..5113
-----------------
DNA (1338bp)
protein (446aa)
glnA; glutamine synthetase (EC:6.3.1.2)
Glutamine synthetase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4T4_GEMAT
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
ERMLT700_curated_scaffold_56_5
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

5336..5686
-----------------
DNA (351bp)
protein (117aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_56_6
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(5683..7464)
-----------------
DNA (1782bp)
protein (594aa)
serine phosphatase id=12554716 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
serine phosphatase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_56_7
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

7502..7969
-----------------
DNA (468bp)
protein (156aa)
fabZ; (3R)-hydroxymyristoyl-ACP dehydratase (EC:4.2.1.-) id=12554717 bin=CNBR_ACIDO species=Brevibacillus borstelensis genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hydroxymyristoyl-ACP dehydratase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_56_8
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(7988..8590)
-----------------
DNA (603bp)
protein (201aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
ERMLT700_curated_scaffold_56_9
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

8678..8827
-----------------
DNA (150bp)
protein (50aa)
Putative uncharacterized protein id=4837276 bin=GWC2_Syntrophus__56_31 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_56_10
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(8892..9875)
-----------------
DNA (984bp)
protein (328aa)
DMT superfamily drug/metabolite permease n=1 Tax=Melioribacter roseus (strain P3M) RepID=I7A4L6_MELRP
DMT superfamily drug/metabolite permease
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
ERMLT700_curated_scaffold_56_11
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

10097..11566
-----------------
DNA (1470bp)
protein (490aa)
nitrogen specific signal transduction histidine kinase NtrB (EC:2.7.13.3); K02482 two-component system, NtrC family, sensor kinase [EC:2.7.13.3] id=12554719 bin=CNBR_ACIDO species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
nitrogen specific signal transduction histidine kinase NtrB (EC:2.7.13.3)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_56_12
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(11574..12554)
-----------------
DNA (981bp)
protein (327aa)
fliA1; RNA polymerase sigma factor for flagellar operon; K02405 RNA polymerase sigma factor for flagellar operon FliA id=12554720 bin=CNBR_ACIDO species=Dethiobacter alkaliphilus genus=Dethiobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
fliA; flagellar operon sigma factor FliA
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_56_13

Not on your lists

comp(12858..13070)
-----------------
DNA (213bp)
protein (71aa)
PAS/PAC sensor hybrid histidine kinase {ECO:0000313|EMBL:AHN97849.1}; TaxID=1447236 species="Bacteria; environmental samples.;" source="uncultured bacterium lac121.;"
id=12554721 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ERMLT700_curated_scaffold_56_14
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(13103..13315)
-----------------
DNA (213bp)
protein (71aa)
id=12554722 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_56_15
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

13486..14796
-----------------
DNA (1311bp)
protein (437aa)
Fis family two component sigma-54 specific transcriptional regulator id=12554723 bin=CNBR_ACIDO species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Fis family transcriptional regulator
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_56_16
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

14812..15750
-----------------
DNA (939bp)
protein (313aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
ERMLT700_curated_scaffold_56_17
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

15762..16112
-----------------
DNA (351bp)
protein (117aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_56_18
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(16133..16864)
-----------------
DNA (732bp)
protein (244aa)
id=12556198 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
ERMLT700_curated_scaffold_56_19
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(17135..18226)
-----------------
DNA (1092bp)
protein (364aa)
tRNA-dihydrouridine synthase id=12554726 bin=CNBR_ACIDO species=Pelosinus fermentans genus=Pelosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
tRNA-dihydrouridine synthase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_56_20
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(18261..18809)
-----------------
DNA (549bp)
protein (183aa)
Putative Transcription termination/antitermination factor NusG id=2278851 bin=GWA2_Elusimicrobia_69_24 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
putative transcription termination/antitermination factor NusG
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_56_21
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(18817..19890)
-----------------
DNA (1074bp)
protein (358aa)
PpiC-type peptidyl-prolyl cis-trans isomerase; K03771 peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] id=12554727 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
PpiC-type peptidyl-prolyl cis-trans isomerase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_56_22
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(19925..23452)
-----------------
DNA (3528bp)
protein (1176aa)
transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-] id=12554728 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
mfd; transcription-repair coupling factor
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_56_23
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(23543..24034)
-----------------
DNA (492bp)
protein (164aa)
rfaEb; d-beta-d-heptose 1-phosphate adenosyltransferase (EC:2.7.7.-) id=12554729 bin=CNBR_ACIDO species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
D-alpha,beta-D-heptose 7-phosphate 1-kinase (EC:2.7.1.- 2.7.7.-)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_56_24
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(24031..25377)
-----------------
DNA (1347bp)
protein (449aa)
ABC transporter; K09691 lipopolysaccharide transport system ATP-binding protein id=12554730 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ABC transporter-like protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_56_25
unknown

Not on your lists

comp(25374..25508)
-----------------
DNA (135bp)
protein (45aa)

This feature has no annotations

ERMLT700_curated_scaffold_56_26
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(25505..26335)
-----------------
DNA (831bp)
protein (277aa)
o-antigen export system permease; K09690 lipopolysaccharide transport system permease protein id=12554731 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ABC-2 type transporter
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_56_27
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(26370..26798)
-----------------
DNA (429bp)
protein (143aa)
ATP synthase F1 subunit epsilon; K02114 F-type H+-transporting ATPase subunit epsilon [EC:3.6.3.14] id=12554733 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=Dehalococcoidia phylum=Chloroflexi tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_56_28
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(26801..28261)
-----------------
DNA (1461bp)
protein (487aa)
ATP synthase F0F1 subunit beta (EC:3.6.3.14); K02112 F-type H+-transporting ATPase subunit beta [EC:3.6.3.14] id=12554734 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ATP synthase F0F1 subunit beta (EC:3.6.3.14)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_56_29
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(28323..29192)
-----------------
DNA (870bp)
protein (290aa)
atpG; ATP synthase subunit gamma, membrane-bound, F1 sector (EC:3.6.3.14) id=12554735 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ATP synthase F1 subunit gamma (EC:3.6.3.15)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_56_30
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(29196..30728)
-----------------
DNA (1533bp)
protein (511aa)
ATP synthase F0F1 subunit alpha (EC:3.6.3.15); K02111 F-type H+-transporting ATPase subunit alpha [EC:3.6.3.14] id=12554736 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
atpA; ATP synthase subunit alpha, membrane-bound, F1 sector (EC:3.6.3.14)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
Displaying items 1-30 of 56 in total

View Taxonomy