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ERMLT700_curated_scaffold_92

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMLT700_curated_scaffold_92_1
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(1..795)
-----------------
DNA (795bp)
protein (265aa)
groEL; chaperonin GroEL; K04077 chaperonin GroEL id=12554189 bin=CNBR_ACIDO species=Acidobacterium capsulatum genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
groEL; molecular chaperone GroEL
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
ERMLT700_curated_scaffold_92_2
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(811..1101)
-----------------
DNA (291bp)
protein (97aa)
chaperonin Cpn10; K04078 chaperonin GroES id=12554188 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Co-chaperonin GroES
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_92_3
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(1264..1476)
-----------------
DNA (213bp)
protein (71aa)
response regulator receiver protein id=12554187 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
response regulator receiver protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_92_4
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(1552..2451)
-----------------
DNA (900bp)
protein (300aa)
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6); K01923 phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] id=12554186 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_92_5
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

2619..3677
-----------------
DNA (1059bp)
protein (353aa)
hypothetical protein; K07027 id=12554184 bin=CNBR_ACIDO species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_92_6
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

3643..4101
-----------------
DNA (459bp)
protein (153aa)
nrdR; transcriptional regulator NrdR; K07738 transcriptional repressor NrdR id=12554183 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
nrdR; transcriptional regulator NrdR
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_92_7
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

4088..6385
-----------------
DNA (2298bp)
protein (766aa)
PAS/PAC sensor signal transduction histidine kinase; K13598 two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] id=12554181 bin=CNBR_ACIDO species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
multi-sensor signal transduction histidine kinase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_92_8
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

6581..7969
-----------------
DNA (1389bp)
protein (463aa)
Fis family transcriptional regulator; K13599 two-component system, NtrC family, nitrogen regulation response regulator NtrX id=12554180 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Fis family transcriptional regulator
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_92_9
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(8017..8916)
-----------------
DNA (900bp)
protein (300aa)
glutamate formiminotransferase (EC:4.3.1.4)
Glutamate formiminotransferase n=3 Tax=Thermoanaerobacter RepID=B0KCB8_THEP3
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_92_10
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

9338..10156
-----------------
DNA (819bp)
protein (273aa)
id=12554178 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_92_11
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

10153..11232
-----------------
DNA (1080bp)
protein (360aa)
Uncharacterized protein id=12554177 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
yxaI; integral inner membrane protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_92_12
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

11247..11717
-----------------
DNA (471bp)
protein (157aa)
phosphatidylglycerophosphatase A; K01095 phosphatidylglycerophosphatase A [EC:3.1.3.27] id=12554176 bin=CNBR_ACIDO species=Desulfonatronospira thiodismutans genus=Desulfonatronospira taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
phosphatidylglycerophosphatase A
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_92_13
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

11761..13023
-----------------
DNA (1263bp)
protein (421aa)
competence/damage-inducible protein CinA C-terminal domain-containing protein; K03742 competence/damage-inducible protein CinA id=12554175 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
competence/damage-inducible protein CinA C-terminal domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_92_14
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

13020..13595
-----------------
DNA (576bp)
protein (192aa)
2'-5' RNA ligase; K01975 2'-5' RNA ligase [EC:6.5.1.-] id=14632292 bin=bin9_gal15 species=Ignicoccus hospitalis genus=Ignicoccus taxon_order=Desulfurococcales taxon_class=Thermoprotei phylum=Crenarchaeota tax=bin9_gal15 organism_group=GAL15
2'-5' RNA ligase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_92_15
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

13611..14213
-----------------
DNA (603bp)
protein (201aa)
Glycerol-3-phosphate acyltransferase n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GTU8_SPHAL
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_92_16
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

14197..15216
-----------------
DNA (1020bp)
protein (340aa)
gpsA; glycerol-3-phosphate dehydrogenase (NAD+ dependent); K00057 glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] id=12555340 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
NAD-dependent glycerol-3-phosphate dehydrogenase domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_92_17
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

15299..16267
-----------------
DNA (969bp)
protein (323aa)
signal recognition particle-docking protein FtsY; K03110 fused signal recognition particle receptor id=12555339 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
signal recognition particle-docking protein FtsY
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_92_18
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

16282..17349
-----------------
DNA (1068bp)
protein (356aa)
riboflavin biosynthesis protein RibD (EC:1.1.1.193 3.5.4.26)
riboflavin biosynthesis protein RibD id=12555338 bin=CNBR_ACIDO species=Deinococcus peraridilitoris genus=Deinococcus taxon_order=Deinococcales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_92_19
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

17330..17950
-----------------
DNA (621bp)
protein (207aa)
riboflavin synthase subunit alpha (EC:2.5.1.9); K00793 riboflavin synthase [EC:2.5.1.9] id=12555337 bin=CNBR_ACIDO species=Halalkalicoccus jeotgali genus=Halalkalicoccus taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ribE; riboflavin synthase subunit alpha
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
ERMLT700_curated_scaffold_92_20
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

17983..19224
-----------------
DNA (1242bp)
protein (414aa)
GTP cyclohydrolase II; K14652 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] id=12555336 bin=CNBR_ACIDO species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ribA; 3,4-dihydroxy-2-butanone-4-phosphate synthase and GTP cyclohydrolase II
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_92_21
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists


19408..20820
-----------------
DNA (1413bp)
protein (471aa)
signal recognition particle subunit FFH/SRP54 (srp54); K03106 signal recognition particle subunit SRP54 id=12555334 bin=CNBR_ACIDO species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
signal recognition particle subunit FFH/SRP54 (srp54)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_92_22
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists


20900..21181
-----------------
DNA (282bp)
protein (94aa)
30S ribosomal protein S16 n=3 Tax=Lactobacillus brevis RepID=RS16_LACBA
30S ribosomal protein S16
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_92_23
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

21181..21453
-----------------
DNA (273bp)
protein (91aa)
hypothetical protein n=1 Tax=Alicyclobacillus pohliae RepID=UPI000377B924
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_92_24
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

21456..22106
-----------------
DNA (651bp)
protein (217aa)
16S rRNA-processing protein RimM id=12555331 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
rimM; 16S rRNA processing protein RimM
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_92_25
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

22154..22903
-----------------
DNA (750bp)
protein (250aa)
tRNA (guanine-N(1)-)-methyltransferase (EC:2.1.1.31); K00554 tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] id=14632412 bin=bin9_gal15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=bin9_gal15 organism_group=GAL15
trmD; tRNA (guanine-N(1)-)-methyltransferase (EC:2.1.1.31)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_92_26
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists


22900..23247
-----------------
DNA (348bp)
protein (116aa)
50S ribosomal protein L19; K02884 large subunit ribosomal protein L19 id=12555329 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
50S ribosomal protein L19
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_92_27
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

23253..23903
-----------------
DNA (651bp)
protein (217aa)
ribonuclease h (EC:3.1.26.4); K03470 ribonuclease HII [EC:3.1.26.4] id=12555328 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ribonuclease H (EC:3.1.26.4)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_92_28
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

23893..25890
-----------------
DNA (1998bp)
protein (666aa)
Tetratricopeptide repeat protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LDF9_CHLTF
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
ERMLT700_curated_scaffold_92_29
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

25887..26159
-----------------
DNA (273bp)
protein (91aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q024M3_SOLUE
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_92_30
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

26176..26823
-----------------
DNA (648bp)
protein (216aa)
Thiamine-phosphate synthase n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SIE4_THEM7
thiamine-phosphate diphosphorylase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
Displaying items 1-30 of 50 in total

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