ggKbase home page

ERMLT700_curated_scaffold_119

Search features with annotation key words

Displaying items 31-59 of 59 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMLT700_curated_scaffold_119_31
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists


comp(33861..34307)
-----------------
DNA (447bp)
protein (149aa)
30S ribosomal protein S11; K02948 small subunit ribosomal protein S11 id=12555553 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
30S ribosomal protein S11
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_119_32
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists


comp(34352..34726)
-----------------
DNA (375bp)
protein (125aa)
rpsM; 30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 id=12555554 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
30S ribosomal protein S13
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_119_33
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(34730..34843)
-----------------
DNA (114bp)
protein (38aa)
50S ribosomal protein L36 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=RL36_KORVE
50S ribosomal protein L36
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
ERMLT700_curated_scaffold_119_34
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(34852..35067)
-----------------
DNA (216bp)
protein (72aa)
Translation initiation factor IF-1 n=1 Tax=Youngiibacter fragilis 232.1 RepID=V7I753_9CLOT
translation initiation factor IF-1
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_119_35
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(35171..36025)
-----------------
DNA (855bp)
protein (285aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00035ECA88
methionine aminopeptidase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_119_36
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(36022..36747)
-----------------
DNA (726bp)
protein (242aa)
adenylate kinase; K00939 adenylate kinase [EC:2.7.4.3] id=12555558 bin=CNBR_ACIDO species=Ferroglobus placidus genus=Ferroglobus taxon_order=Archaeoglobales taxon_class=Archaeoglobi phylum=Euryarchaeota tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
adenylate kinase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_119_37
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists


comp(36868..38259)
-----------------
DNA (1392bp)
protein (464aa)
protein translocase subunit SecY/sec61 alpha; K03076 preprotein translocase subunit SecY id=12555559 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
protein translocase subunit secY/sec61 alpha
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_119_38
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists


comp(38373..38822)
-----------------
DNA (450bp)
protein (150aa)
rplO; 50S ribosomal protein L15; K02876 large subunit ribosomal protein L15 id=12555560 bin=CNBR_ACIDO species=unknown genus=Thermoanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
rplO; 50S ribosomal protein L15
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_119_39
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists


comp(38879..39085)
-----------------
DNA (207bp)
protein (69aa)
50S ribosomal protein L30 n=1 Tax=Lachnospiraceae bacterium A2 RepID=R9KZA8_9FIRM
50S ribosomal protein L30
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_119_40
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists


comp(39088..39612)
-----------------
DNA (525bp)
protein (175aa)
rpsE; 30S ribosomal protein S5; K02988 small subunit ribosomal protein S5 id=12555562 bin=CNBR_ACIDO species=Acidobacterium capsulatum genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
rpsE; 30S ribosomal protein S5
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_119_41
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists


comp(39633..40007)
-----------------
DNA (375bp)
protein (125aa)
50S ribosomal protein L18; K02881 large subunit ribosomal protein L18 id=12555563 bin=CNBR_ACIDO species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
50S ribosomal protein L18
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_119_42
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists


comp(40036..40575)
-----------------
DNA (540bp)
protein (180aa)
50S ribosomal protein L6; K02933 large subunit ribosomal protein L6 id=12555564 bin=CNBR_ACIDO species=unknown genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
50S ribosomal protein L6
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_119_43
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists


comp(40652..41062)
-----------------
DNA (411bp)
protein (137aa)
rpsH; 30S ribosomal protein S8; K02994 small subunit ribosomal protein S8 id=12555565 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
rpsH; 30S ribosomal protein S8
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_119_44
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists


comp(41151..41336)
-----------------
DNA (186bp)
protein (62aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003822EB2
30S ribosomal protein S14
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
ERMLT700_curated_scaffold_119_45
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists


comp(41365..41907)
-----------------
DNA (543bp)
protein (181aa)
rplE; 50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 id=12555567 bin=CNBR_ACIDO species=Bacillus clausii genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
rplE; 50S ribosomal protein L5
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_119_46
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists


comp(41904..42236)
-----------------
DNA (333bp)
protein (111aa)
rplX; 50S ribosomal protein L24; K02895 large subunit ribosomal protein L24 id=12555568 bin=CNBR_ACIDO species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
50S ribosomal protein L24
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_119_47
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists


comp(42307..42675)
-----------------
DNA (369bp)
protein (123aa)
50S ribosomal protein L14; K02874 large subunit ribosomal protein L14 id=12555569 bin=CNBR_ACIDO species=Terriglobus saanensis genus=Terriglobus taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
rplN; 50S ribosomal protein L14
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_119_48
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists


comp(42709..42960)
-----------------
DNA (252bp)
protein (84aa)
30S ribosomal protein S17 id=12555570 bin=CNBR_ACIDO species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
30S ribosomal protein S17
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_119_49
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists


comp(43026..43229)
-----------------
DNA (204bp)
protein (68aa)
50S ribosomal protein L29; K02904 large subunit ribosomal protein L29 id=16961425 bin=RBG_16_Aminicenantes_63_16_plus species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_63_16_plus organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate Resolve three similar GC_Cov Aminicentantes bins with ESOM
50S ribosomal protein L29p
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
ERMLT700_curated_scaffold_119_50
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists


comp(43279..43704)
-----------------
DNA (426bp)
protein (142aa)
rplP; 50S ribosomal protein L16; K02878 large subunit ribosomal protein L16 id=12555572 bin=CNBR_ACIDO species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
rplP; 50S ribosomal protein L16
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
ERMLT700_curated_scaffold_119_51
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists


comp(43711..44403)
-----------------
DNA (693bp)
protein (231aa)
30S ribosomal protein S3; K02982 small subunit ribosomal protein S3 id=12555573 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
30S ribosomal protein S3
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_119_52
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists


comp(44464..44904)
-----------------
DNA (441bp)
protein (147aa)
50S ribosomal protein L22 id=12555574 bin=CNBR_ACIDO species=Terriglobus roseus genus=Terriglobus taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
rplV; 50S ribosomal protein L22
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_119_53
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists


comp(44950..45276)
-----------------
DNA (327bp)
protein (109aa)
rpsS; ribosomal protein S19; K02965 small subunit ribosomal protein S19 id=12555575 bin=CNBR_ACIDO species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
rpsS; 30S ribosomal protein S19
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_119_54
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists


comp(45336..46160)
-----------------
DNA (825bp)
protein (275aa)
rplB; 50S ribosomal protein L2; K02886 large subunit ribosomal protein L2 id=12555576 bin=CNBR_ACIDO species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
rplB; 50S ribosomal protein L2
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_119_55
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists


comp(46167..46457)
-----------------
DNA (291bp)
protein (97aa)
50S ribosomal protein L25; K02892 large subunit ribosomal protein L23 id=12555577 bin=CNBR_ACIDO species=Terriglobus saanensis genus=Terriglobus taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
50S ribosomal protein L23
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_119_56
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists


comp(46467..47144)
-----------------
DNA (678bp)
protein (226aa)
rplD; 50S ribosomal protein L4; K02926 large subunit ribosomal protein L4 id=12555578 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
50S ribosomal protein L4P
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_119_57
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists


comp(47186..47869)
-----------------
DNA (684bp)
protein (228aa)
50S ribosomal protein L3P; K02906 large subunit ribosomal protein L3 id=12555579 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
50S ribosomal protein L3P
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_119_58
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists


comp(47942..48277)
-----------------
DNA (336bp)
protein (112aa)
rpsJ; 30S ribosomal protein S10; K02946 small subunit ribosomal protein S10 id=12555580 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
rpsJ; 30S ribosomal protein S10
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_119_59
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(48321..48428)
-----------------
DNA (108bp)
protein (36aa)
translation elongation factor 1A (EF-1A/EF-Tu) (EC:3.6.5.3)
translation elongation factor Tu id=12555603 bin=CNBR_ACIDO species=Hyphomicrobium denitrificans genus=Hyphomicrobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
Displaying items 31-59 of 59 in total

View Taxonomy