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ERMLT700_curated_scaffold_119

Search features with annotation key words

Displaying items 1-30 of 59 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMLT700_curated_scaffold_119_1
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(3..674)
-----------------
DNA (672bp)
protein (224aa)
id=12555533 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
prepilin-type cleavage/methylation domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_119_2
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(671..1084)
-----------------
DNA (414bp)
protein (138aa)
PilV; K02671 type IV pilus assembly protein PilV id=14623305 bin=bin5_DeltaP species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin5_DeltaP organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
ERMLT700_curated_scaffold_119_3
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(1211..2461)
-----------------
DNA (1251bp)
protein (417aa)
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRA8_KORVE
PAS/PAC sensor signal transduction histidine kinase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_119_4
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(2458..3258)
-----------------
DNA (801bp)
protein (267aa)
Type 4 prepilin-like proteins leader peptide-processing enzyme id=3228990 bin=GWF2_Geobacter_54_21 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Geobacter_54_21 organism_group=Deltaproteobacteria organism_desc=Good
prepilin peptidase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_119_5
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(3255..4190)
-----------------
DNA (936bp)
protein (312aa)
hypothetical protein id=12555536 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_119_6
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(4214..5020)
-----------------
DNA (807bp)
protein (269aa)
Putative uncharacterized protein n=1 Tax=sediment metagenome RepID=D9PLS6_9ZZZZ
putative ABC transporter permease
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_119_7
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(5017..6003)
-----------------
DNA (987bp)
protein (329aa)
ABC transporter; K01990 ABC-2 type transport system ATP-binding protein id=12555538 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
multidrug ABC transporter ATPase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_119_8
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(6017..7219)
-----------------
DNA (1203bp)
protein (401aa)
id=12555539 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
DSBA-like thioredoxin domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_119_9
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(7310..7840)
-----------------
DNA (531bp)
protein (177aa)
Membrane or secreted protein containing Prepilin-type cleavage/methylation, N-terminal domain n=1 Tax=sediment metagenome RepID=D9PMY9_9ZZZZ
pilin, type IV
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_119_10
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(7943..8476)
-----------------
DNA (534bp)
protein (178aa)
Membrane or secreted protein containing Prepilin-type cleavage/methylation, N-terminal domain n=1 Tax=sediment metagenome RepID=D9PMY9_9ZZZZ
pilin, type IV
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_119_11
unknown

Not on your lists

8610..8756
-----------------
DNA (147bp)
protein (49aa)

This feature has no annotations

ERMLT700_curated_scaffold_119_12
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(8729..10192)
-----------------
DNA (1464bp)
protein (488aa)
Transcriptional regulatory protein pilR id=4139373 bin=GWC2_Nitrospirae_57_13 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
pilR; transcriptional regulatory protein pilR
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_119_13
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(10189..11892)
-----------------
DNA (1704bp)
protein (568aa)
PAS domain S-box protein (EC:2.7.13.3)
Signal transduction histidine-protein kinase atoS n=1 Tax=sediment metagenome RepID=D9PFH4_9ZZZZ
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_119_14
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(11900..13120)
-----------------
DNA (1221bp)
protein (407aa)
Type 4 fimbrial assembly protein pilC n=1 Tax=sediment metagenome RepID=D9PFH5_9ZZZZ
type II secretion system protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_119_15
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(13234..14358)
-----------------
DNA (1125bp)
protein (375aa)
Twitching mobility protein n=1 Tax=sediment metagenome RepID=D9PFH6_9ZZZZ
pilus retraction protein PilT
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_119_16
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(14355..16112)
-----------------
DNA (1758bp)
protein (586aa)
type II secretion system protein E; K02652 type IV pilus assembly protein PilB id=12555544 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
type II secretion system protein E
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_119_17
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(16226..17113)
-----------------
DNA (888bp)
protein (296aa)
hypothetical protein id=12555545 bin=CNBR_ACIDO species=Anaeromusa acidaminophila genus=Anaeromusa taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_119_18
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

17300..18007
-----------------
DNA (708bp)
protein (236aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_119_19
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

18004..19350
-----------------
DNA (1347bp)
protein (449aa)
secretion protein HlyD family protein; K02005 HlyD family secretion protein id=12555547 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
secretion protein HlyD family protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_119_20
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

19437..20657
-----------------
DNA (1221bp)
protein (407aa)
antimicrobial peptide ABC transporter permease; K02004 putative ABC transport system permease protein id=12555548 bin=CNBR_ACIDO species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_119_21
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

20654..21952
-----------------
DNA (1299bp)
protein (433aa)
macB10; putative ABC transporter permease; K02004 putative ABC transport system permease protein id=12555549 bin=CNBR_ACIDO species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_119_22
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

21968..23659
-----------------
DNA (1692bp)
protein (564aa)
Putative uncharacterized protein n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NFW0_ROSCS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABU56341.1}; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus castenholzii (strain DSM 13941 / HLO8).;"
ERMLT700_curated_scaffold_119_23
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(23702..24031)
-----------------
DNA (330bp)
protein (110aa)
glnB; nitrogen regulatory protein P-II 1; K04751 nitrogen regulatory protein P-II 1 id=12555874 bin=CNBR_ACIDO species=Sphingobium sp. SYK-6 genus=Sphingobium taxon_order=Sphingomonadales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
nitrogen regulatory protein P-II
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_119_24
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(24028..26688)
-----------------
DNA (2661bp)
protein (887aa)
metal dependent phosphohydrolase (EC:2.7.7.59); K00990 [protein-PII] uridylyltransferase [EC:2.7.7.59] id=12555871 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
metal dependent phosphohydrolase (EC:2.7.7.59)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_119_25
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(26710..27606)
-----------------
DNA (897bp)
protein (299aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_119_26
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(27636..28514)
-----------------
DNA (879bp)
protein (293aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_119_27
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

29060..31156
-----------------
DNA (2097bp)
protein (699aa)
Lytic transglycosylase catalytic n=1 Tax=uncultured bacterium 246 RepID=E3T6F3_9BACT
translation elongation factor G
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_119_28
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists


comp(31275..31865)
-----------------
DNA (591bp)
protein (197aa)
50S ribosomal protein L17 id=12555551 bin=CNBR_ACIDO species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
LSU ribosomal protein L17p
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_119_29
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(31934..32920)
-----------------
DNA (987bp)
protein (329aa)
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6) id=12555552 bin=CNBR_ACIDO species=Terriglobus roseus genus=Terriglobus taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
DNA-directed RNA polymerase subunit alpha
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_119_30
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists


comp(33111..33740)
-----------------
DNA (630bp)
protein (210aa)
30S ribosomal protein S4 id=4399844 bin=GWC2_Geobacteraceae_55_20 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Geobacteraceae_55_20 organism_group=Deltaproteobacteria
rpsD; 30S ribosomal protein S4
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
Displaying items 1-30 of 59 in total

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