ggKbase home page

ERMLT700_curated_scaffold_123

Search features with annotation key words

Displaying items 61-90 of 107 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMLT700_curated_scaffold_123_61
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(67416..67760)
-----------------
DNA (345bp)
protein (115aa)
preprotein translocase subunit YajC; K03210 preprotein translocase subunit YajC id=12556593 bin=CNBR_ACIDO species=Hippea maritima genus=Hippea taxon_order=Desulfurellales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
preprotein translocase subunit YajC
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_123_62
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(67757..68923)
-----------------
DNA (1167bp)
protein (389aa)
tgt-2; queuine tRNA-ribosyltransferase (EC:2.4.2.29); K00773 queuine tRNA-ribosyltransferase [EC:2.4.2.29] id=12556594 bin=CNBR_ACIDO species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
tgt-2; queuine tRNA-ribosyltransferase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_123_63
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

68944..70107
-----------------
DNA (1164bp)
protein (388aa)
D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] id=12556595 bin=CNBR_ACIDO species=Oscillochloris trichoides genus=Oscillochloris taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
D-alanine--D-alanine ligase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
ERMLT700_curated_scaffold_123_64
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

70104..71531
-----------------
DNA (1428bp)
protein (476aa)
Tetratricopeptide domain-containing protein id=3220697 bin=GWC2_Ignavibacteria_56_12 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_123_65
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(72118..74268)
-----------------
DNA (2151bp)
protein (717aa)
peptidyl-prolyl cis-trans isomerase id=12556596 bin=CNBR_ACIDO species=Myxococcus fulvus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
peptidyl-prolyl cis-trans isomerase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_123_66
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

74321..74959
-----------------
DNA (639bp)
protein (213aa)
Deoxynucleoside kinase family protein id=12556597 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Deoxynucleoside kinase family protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
ERMLT700_curated_scaffold_123_67
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

75173..76078
-----------------
DNA (906bp)
protein (302aa)
accD; acetyl-CoA carboxylase, carboxyl transferase subunit beta; K01963 acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2] id=12556598 bin=CNBR_ACIDO species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
acetyl-CoA carboxylase, carboxyl transferase subunit beta
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_123_68
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

76080..77372
-----------------
DNA (1293bp)
protein (431aa)
tetrahydrofolylpolyglutamate synthase/dihydrofolate synthase id=12556599 bin=CNBR_ACIDO species=Myxococcus stipitatus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
bifunctional folylpolyglutamate synthase/dihydrofolate synthase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_123_69
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

77390..79714
-----------------
DNA (2325bp)
protein (775aa)
organic solvent tolerance protein OstA-like; K04744 LPS-assembly protein id=12556600 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
lptD; lipopolysaccharide biogenesis outer membrane protein LptD
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_123_70
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

79719..80783
-----------------
DNA (1065bp)
protein (355aa)
hypothetical protein id=8265745 bin=CD_OP8_4m species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
glucose-1-phosphate thymidylyltransferase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_123_71
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

80777..81799
-----------------
DNA (1023bp)
protein (341aa)
dTDP-glucose 4,6-dehydratase n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XWB4_9BACT
dTDP-glucose 4,6-dehydratase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_123_72
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

81803..82738
-----------------
DNA (936bp)
protein (312aa)
NAD-dependent epimerase/dehydratase id=12556601 bin=CNBR_ACIDO species=unknown genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
gmd; putative GDP-mannose 4,6-dehydratase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_123_73
unknown

Not on your lists

82788..82997
-----------------
DNA (210bp)
protein (70aa)

This feature has no annotations

ERMLT700_curated_scaffold_123_74
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

83053..83532
-----------------
DNA (480bp)
protein (160aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_123_75
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

83610..84647
-----------------
DNA (1038bp)
protein (346aa)
radical SAM protein id=12555832 bin=CNBR_ACIDO species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
radical SAM protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
ERMLT700_curated_scaffold_123_76
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(84692..86989)
-----------------
DNA (2298bp)
protein (766aa)
ATPases with chaperone activity, ATP-binding subunit id=4925428 bin=GWC2_Deltaproteobacteria_42_51 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
chaperone activity ATPase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_123_77
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

87220..87774
-----------------
DNA (555bp)
protein (185aa)
flagellar M-ring protein FliF n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI0002887190
translation initiation factor IF-2
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_123_78
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(87847..88275)
-----------------
DNA (429bp)
protein (143aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
ERMLT700_curated_scaffold_123_79
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(88324..89949)
-----------------
DNA (1626bp)
protein (542aa)
thiC; thiamine biosynthesis protein ThiC; K03147 thiamine biosynthesis protein ThiC id=12556604 bin=CNBR_ACIDO species=Actinomadura flavalba genus=Actinomadura taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
thiamine biosynthesis protein ThiC
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_123_80
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

90107..90652
-----------------
DNA (546bp)
protein (182aa)
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium RepID=Q84CY2_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ERMLT700_curated_scaffold_123_81
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

90662..91489
-----------------
DNA (828bp)
protein (276aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_123_82
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(91550..94525)
-----------------
DNA (2976bp)
protein (992aa)
peptidase S9B dipeptidylpeptidase IV domain-containing protein id=12555423 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
surface antigen (D15)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_123_83
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(94647..96677)
-----------------
DNA (2031bp)
protein (677aa)
id=12554224 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
ERMLT700_curated_scaffold_123_84
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(96683..97075)
-----------------
DNA (393bp)
protein (131aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
ERMLT700_curated_scaffold_123_85
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

97115..97882
-----------------
DNA (768bp)
protein (256aa)
id=12554223 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_123_86
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(98035..98496)
-----------------
DNA (462bp)
protein (154aa)
Large-conductance mechanosensitive channel n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N1N5_ANATU
mscL; large-conductance mechanosensitive channel
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_123_87
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(98573..100234)
-----------------
DNA (1662bp)
protein (554aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000365AE44
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
ERMLT700_curated_scaffold_123_88
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(100253..101443)
-----------------
DNA (1191bp)
protein (397aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003601526
cytochrome c, class I
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
ERMLT700_curated_scaffold_123_89
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(101464..101925)
-----------------
DNA (462bp)
protein (154aa)
hypothetical protein n=1 Tax=Flavobacterium sp. SCGC AAA160-P02 RepID=UPI000381380F
competence protein ComEA
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
ERMLT700_curated_scaffold_123_90
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(101922..102395)
-----------------
DNA (474bp)
protein (158aa)
hypothetical protein n=1 Tax=Flavobacterium sp. SCGC AAA160-P02 RepID=UPI000376764D
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
Displaying items 61-90 of 107 in total

View Taxonomy