ggKbase home page

ERMLT700_curated_scaffold_123

Search features with annotation key words

Displaying items 1-30 of 107 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMLT700_curated_scaffold_123_1
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

1..2631
-----------------
DNA (2631bp)
protein (877aa)
Protein kinase/protein beta WD-40 repeat id=8266675 bin=CD_OP8_4m species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
serine/threonine protein kinase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
ERMLT700_curated_scaffold_123_2
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

2982..3239
-----------------
DNA (258bp)
protein (86aa)
excinuclease ABC subunit C n=1 Tax=Bradyrhizobium japonicum RepID=UPI00037BE8BC
excinuclease ABC subunit C
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
ERMLT700_curated_scaffold_123_3
Cylindrospermum stagnale, Cylindrospermum, Nostocales, Cyanobacteria, Bacteria

Not on your lists

3435..4580
-----------------
DNA (1146bp)
protein (382aa)
Uncharacterized protein n=1 Tax=Cylindrospermum stagnale PCC 7417 RepID=K9X1I9_9NOST
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ26490.1}; TaxID=56107 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Cylindrospermum.;" source="Cylindrospermum stagnale PCC 7417.;"
ERMLT700_curated_scaffold_123_4
Cylindrospermum stagnale, Cylindrospermum, Nostocales, Cyanobacteria, Bacteria

Not on your lists

4582..6138
-----------------
DNA (1557bp)
protein (519aa)
Uncharacterized protein n=1 Tax=Cylindrospermum stagnale PCC 7417 RepID=K9X319_9NOST
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ26489.1}; TaxID=56107 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Cylindrospermum.;" source="Cylindrospermum stagnale PCC 7417.;"
ERMLT700_curated_scaffold_123_5
unknown

Not on your lists

6168..6371
-----------------
DNA (204bp)
protein (68aa)

This feature has no annotations

ERMLT700_curated_scaffold_123_6
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6834..7103)
-----------------
DNA (270bp)
protein (90aa)
Uncharacterized protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YFN1_MESOW
Hydrolase {ECO:0000313|EMBL:KJC59265.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
hypothetical protein
ERMLT700_curated_scaffold_123_7
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7612..9321
-----------------
DNA (1710bp)
protein (570aa)
response regulator/thioredoxin-disulfide reductase (EC:1.8.1.9)
Response regulator/thioredoxin-disulfide reductase {ECO:0000313|EMBL:CAM06237.1}; EC=1.8.1.9 {ECO:0000313|EMBL:CAM06237.1};; TaxID=405948 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea (strain NRRL 23338).;"
Response regulator/thioredoxin-disulfide reductase n=2 Tax=Saccharopolyspora erythraea RepID=A4FQB2_SACEN
ERMLT700_curated_scaffold_123_8
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(9891..10838)
-----------------
DNA (948bp)
protein (316aa)
Uncharacterized protein n=2 Tax=Proteobacteria RepID=Q706Q9_PSEPU
hypothetical protein
Tax=RBG_16_Euryarchaeota_68_12_curated
ERMLT700_curated_scaffold_123_9
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

11416..13002
-----------------
DNA (1587bp)
protein (529aa)
Beta-lactamase domain-containing protein n=1 Tax=Methyloglobulus morosus KoM1 RepID=V5BTR8_9GAMM
beta-lactamase domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
ERMLT700_curated_scaffold_123_10
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

13362..14612
-----------------
DNA (1251bp)
protein (417aa)
formyl-CoA transferase n=1 Tax=SAR324 cluster bacterium SCGC AB-629-O05 RepID=UPI0003623CF5
formyl-CoA transferase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_123_11
RLO_WOR_2_51_8, WOR-2, Bacteria

Not on your lists

14602..16074
-----------------
DNA (1473bp)
protein (491aa)
Tax=RIFCSPLOWO2_12_FULL_WOR_2_51_8_curated
ERMLT700_curated_scaffold_123_12
Chroococcidiopsis thermalis, Chroococcidiopsis, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(16081..17268)
-----------------
DNA (1188bp)
protein (396aa)
Uncharacterized protein n=1 Tax=Chroococcidiopsis thermalis PCC 7203 RepID=K9U4M9_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY89593.1}; TaxID=251229 species="Bacteria; Cyanobacteria; Pleurocapsales; Chroococcidiopsis.;" source="Chroococcidiopsis thermalis PCC 7203.;"
ERMLT700_curated_scaffold_123_13
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

17437..18750
-----------------
DNA (1314bp)
protein (438aa)
DNA primase small subunit id=14629245 bin=bin8_Chloro species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin8_Chloro organism_group=Chloroflexi
eukaryotic-type DNA primase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
ERMLT700_curated_scaffold_123_14
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(18695..19801)
-----------------
DNA (1107bp)
protein (369aa)
ATP-dependent DNA ligase-like protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XX07_RAMTT
ATP-dependent DNA ligase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
ERMLT700_curated_scaffold_123_15
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

19878..20795
-----------------
DNA (918bp)
protein (306aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00036687D8
5'-3' exonuclease
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
ERMLT700_curated_scaffold_123_16
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

21242..21448
-----------------
DNA (207bp)
protein (69aa)
cold-shock DNA-binding protein family; K03704 cold shock protein (beta-ribbon, CspA family) id=12556558 bin=CNBR_ACIDO species=Planctomyces brasiliensis genus=Planctomyces taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
cold-shock DNA-binding protein family
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
ERMLT700_curated_scaffold_123_17
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

21563..22150
-----------------
DNA (588bp)
protein (196aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MN31_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_123_18
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(22210..22413)
-----------------
DNA (204bp)
protein (68aa)
cold-shock DNA-binding protein family; K03704 cold shock protein (beta-ribbon, CspA family) id=12556558 bin=CNBR_ACIDO species=Planctomyces brasiliensis genus=Planctomyces taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
cold-shock DNA-binding domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_123_19
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(22569..23285)
-----------------
DNA (717bp)
protein (239aa)
Nitrate transporter ATPase n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZHJ3_AZOL4
nasD; Nitrate transporter ATPase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_123_20
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(23278..24105)
-----------------
DNA (828bp)
protein (276aa)
phP-like protein id=12556561 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
ERMLT700_curated_scaffold_123_21
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(24188..25177)
-----------------
DNA (990bp)
protein (330aa)
Ferric uptake regulator, Fur family id=12556562 bin=CNBR_ACIDO species=Desulfovibrio hydrothermalis genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ferric uptake regulation protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_123_22
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(25213..25536)
-----------------
DNA (324bp)
protein (108aa)
iron-sulfur cluster assembly accessory protein; K15724 iron-sulfur cluster insertion protein id=12556563 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
iron-sulfur cluster assembly accessory protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_123_23
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(25612..27129)
-----------------
DNA (1518bp)
protein (506aa)
fumarase (EC:4.2.1.2)
Fumarase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01VE5_SOLUE
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_123_24
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27215..28345)
-----------------
DNA (1131bp)
protein (377aa)
Uncharacterized protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QDZ1_9DELT
Uncharacterized protein {ECO:0000313|EMBL:KFA94268.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
hypothetical protein
ERMLT700_curated_scaffold_123_25
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

28919..30331
-----------------
DNA (1413bp)
protein (471aa)
Fumarate lyase n=1 Tax=Geobacter sp. (strain M18) RepID=E8WRI4_GEOS8
fumarate lyase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_123_26
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

30328..30996
-----------------
DNA (669bp)
protein (223aa)
type 11 methyltransferase id=12556565 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
methylase involved in ubiquinone/menaquinone biosynthesis
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_123_27
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

31000..31806
-----------------
DNA (807bp)
protein (269aa)
Phosphomethylpyrimidine kinase n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CF58_THET1
phosphomethylpyrimidine kinase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_123_28
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

31944..32420
-----------------
DNA (477bp)
protein (159aa)
molybdopterin converting factor-like protein; K03635 molybdopterin synthase catalytic subunit [EC:2.-.-.-] id=12556567 bin=CNBR_ACIDO species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
molybdopterin biosynthesis MoaE protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_123_29
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

32411..32656
-----------------
DNA (246bp)
protein (82aa)
molybdopterin converting factor subunit 1; K03635 molybdopterin synthase catalytic subunit [EC:2.-.-.-] id=12556568 bin=CNBR_ACIDO species=Roseiflexus castenholzii genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
molybdopterin synthase subunit MoaD / molybdopterin synthase subunit MoaE
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_123_30
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

32763..33833
-----------------
DNA (1071bp)
protein (357aa)
prfA; peptide chain release factor 1; K02835 peptide chain release factor 1 id=12556569 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
prfA; peptide chain release factor 1
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
Displaying items 1-30 of 107 in total

View Taxonomy