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ERMLT700_curated_scaffold_183

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMLT700_curated_scaffold_183_1
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(3..152)
-----------------
DNA (150bp)
protein (50aa)
Glucose-6-phosphate 1-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497}; Short=G6PD {ECO:0000256|HAMAP-Rule:MF_00966};; EC=1.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497};; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8).;"
Glucose-6-phosphate 1-dehydrogenase n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NWP3_GRAMM
glucose-6-phosphate 1-dehydrogenase
ERMLT700_curated_scaffold_183_2
Burkholderiales bacterium GJ-E10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(133..1110)
-----------------
DNA (978bp)
protein (326aa)
6-phosphogluconate dehydrogenase, decarboxylating n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P3A2_9BACT
6-phosphogluconate dehydrogenase
6-phosphogluconate dehydrogenase {ECO:0000313|EMBL:BAP87701.1}; TaxID=1469502 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium GJ-E10.;"
ERMLT700_curated_scaffold_183_3
Opitutaceae bacterium TAV1, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(1118..1576)
-----------------
DNA (459bp)
protein (153aa)
Sugar-phosphate isomerase, RpiB/LacA/LacB family n=2 Tax=unclassified Opitutaceae RepID=H1IY73_9BACT
ribose 5-phosphate isomerase
Ribose 5-phosphate isomerase B {ECO:0000313|EMBL:EIQ01267.1}; TaxID=278956 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;"
ERMLT700_curated_scaffold_183_4
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

1667..2986
-----------------
DNA (1320bp)
protein (440aa)
hypothetical protein id=12556920 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_183_5
unknown

Not on your lists

comp(3056..3235)
-----------------
DNA (180bp)
protein (60aa)

This feature has no annotations

ERMLT700_curated_scaffold_183_6
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(3316..4236)
-----------------
DNA (921bp)
protein (307aa)
HTH-type transcriptional regulator soxR id=12555865 bin=CNBR_ACIDO species=Paenibacillus sp. JC66 genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
putative LysR-family transcriptional regulator
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_183_7
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(4285..5172)
-----------------
DNA (888bp)
protein (296aa)
type II R/M system modification methyltransferase; K00571 site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]; K00590 site-specific DNA-methyltransferase (cytosine-N4-specific) [EC:2.1.1.113] id=12556921 bin=CNBR_ACIDO species=Methanocaldococcus jannaschii genus=Methanocaldococcus taxon_order=Methanococcales taxon_class=Methanococci phylum=Euryarchaeota tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
DNA modification methylase (EC:2.1.1.113)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_183_8
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(5239..5451)
-----------------
DNA (213bp)
protein (71aa)
id=12556922 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_183_9
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(5729..6292)
-----------------
DNA (564bp)
protein (188aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_183_10
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

6465..7565
-----------------
DNA (1101bp)
protein (367aa)
pbpG; PbpG; K07262 D-alanyl-D-alanine endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-] id=12556923 bin=CNBR_ACIDO species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
murein-DD-endopeptidase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_183_11
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(7669..8505)
-----------------
DNA (837bp)
protein (279aa)
hypothetical protein n=1 Tax=Desulfospira joergensenii RepID=UPI0003B3F57B
formate dehydrogenase accessory protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_183_12
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

8731..10161
-----------------
DNA (1431bp)
protein (477aa)
glycogen synthase id=12556924 bin=CNBR_ACIDO species=Myxococcus stipitatus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
glgA; glycogen synthase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_183_13
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

10215..10553
-----------------
DNA (339bp)
protein (113aa)
trxA; Thioredoxin 1 (TRX1) (TRX)
thioredoxin; K03671 thioredoxin 1 id=12556925 bin=CNBR_ACIDO species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_183_14
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

10556..11554
-----------------
DNA (999bp)
protein (333aa)
trxB; thioredoxin-disulfide reductase (EC:1.8.1.9); K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9] id=12556926 bin=CNBR_ACIDO species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
trxB; thioredoxin reductase, FAD/NAD(P)-binding (EC:1.8.1.9)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_183_15
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

11674..12252
-----------------
DNA (579bp)
protein (193aa)
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AB78_GEMAT
RNA polymerase sigma factor, sigma-70 family
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_183_16
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

12287..12820
-----------------
DNA (534bp)
protein (178aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_183_17
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

12817..14103
-----------------
DNA (1287bp)
protein (429aa)
Uncharacterized protein n=1 Tax=Chamaesiphon minutus PCC 6605 RepID=K9UQL9_9CHRO id=5223449 bin=16ft_combo_ws3_JS1 species=Chamaesiphon minutus genus=Chamaesiphon taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
conserved membrane protein of unknown function
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_183_18
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(14178..15221)
-----------------
DNA (1044bp)
protein (348aa)
tRNA (5-methyl aminomethyl-2-thiouridylate)-methyltransferase (EC:2.1.1.61); K00566 tRNA-specific 2-thiouridylase [EC:2.8.1.-] id=12556927 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
mnmA; tRNA-specific 2-thiouridylase MnmA (EC:2.1.1.61)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_183_19
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(15364..16530)
-----------------
DNA (1167bp)
protein (389aa)
class V aminotransferase; K04487 cysteine desulfurase [EC:2.8.1.7] id=12556928 bin=CNBR_ACIDO species=Roseiflexus castenholzii genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
cysteine desulfurase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_183_20
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

16699..17244
-----------------
DNA (546bp)
protein (182aa)
hypothetical protein id=12556929 bin=CNBR_ACIDO species=Acidobacterium capsulatum genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_183_21
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

17352..18110
-----------------
DNA (759bp)
protein (253aa)
id=12556930 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_183_22
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

18126..18917
-----------------
DNA (792bp)
protein (264aa)
hypothetical protein; K09134 hypothetical protein id=12556931 bin=CNBR_ACIDO species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_183_23
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

19030..20256
-----------------
DNA (1227bp)
protein (409aa)
acyl-CoA dehydrogenase (EC:1.3.99.-)
acyl-CoA dehydrogenase domain-containing protein id=24458148 bin=RBG_19FT_COMBO_GAL15_69_19 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
ERMLT700_curated_scaffold_183_24
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

20262..21257
-----------------
DNA (996bp)
protein (332aa)
glpX; fructose 1,6-bisphosphatase II (EC:3.1.3.11); K02446 fructose-1,6-bisphosphatase II [EC:3.1.3.11] id=14627513 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
glpX; fructose 1,6-bisphosphatase II (EC:3.1.3.11)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_183_25
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

21466..22770
-----------------
DNA (1305bp)
protein (435aa)
HSR1-like GTP-binding protein; K03665 GTP-binding protein HflX id=12556932 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
HflX; GTPase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_183_26
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

22784..24166
-----------------
DNA (1383bp)
protein (461aa)
TPR repeat-containing protein id=12556933 bin=CNBR_ACIDO species=Gloeobacter kilaueensis genus=Gloeobacter taxon_order=Gloeobacterales taxon_class=Gloeobacteria phylum=Cyanobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_183_27
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

24171..24737
-----------------
DNA (567bp)
protein (189aa)
pgsA_2; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5); K00995 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] id=12556934 bin=CNBR_ACIDO species=Persephonella marina genus=Persephonella taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_183_28
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(24712..25647)
-----------------
DNA (936bp)
protein (312aa)
UDP-glucuronate decarboxylase (EC:4.1.1.35); K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] id=12556935 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
NAD-dependent epimerase/dehydratase family protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_183_29
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(25694..27127)
-----------------
DNA (1434bp)
protein (478aa)
putative undecaprenyl-phosphate glucose phosphotransferase (EC:2.7.8.-)
capsular polysaccharide synthesis protein (cpsA) id=12556936 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_183_30
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(27121..28293)
-----------------
DNA (1173bp)
protein (391aa)
putative glycosyl transferase, group 1 (EC:2.4.-.-)
group 1 glycosyl transferase id=12556937 bin=CNBR_ACIDO species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
Displaying items 1-30 of 51 in total

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