ggKbase home page

ERMLT700_curated_scaffold_374

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMLT700_curated_scaffold_374_1
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

2..1462
-----------------
DNA (1461bp)
protein (487aa)
peptidase, s1c (protease do) subfamily (EC:3.4.21.-)
degP4; S1C family peptidase id=12554125 bin=CNBR_ACIDO species=Corallococcus coralloides genus=Corallococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_374_2
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

1514..2932
-----------------
DNA (1419bp)
protein (473aa)
two component, sigma54 specific, Fis family transcriptional regulator; K13599 two-component system, NtrC family, nitrogen regulation response regulator NtrX id=12554124 bin=CNBR_ACIDO species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Fis family transcriptional regulator
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_374_3
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

3607..4551
-----------------
DNA (945bp)
protein (315aa)
NAD-dependent epimerase/dehydratase; K01784 UDP-glucose 4-epimerase [EC:5.1.3.2] id=12554122 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
NAD-dependent epimerase/dehydratase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_374_4
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

4558..5409
-----------------
DNA (852bp)
protein (284aa)
hypothetical protein n=1 Tax=Methylosinus sp. LW4 RepID=UPI0003773409
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_374_5
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(5422..7482)
-----------------
DNA (2061bp)
protein (687aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
ERMLT700_curated_scaffold_374_6
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(7522..9489)
-----------------
DNA (1968bp)
protein (656aa)
von Willebrand factor A id=12554573 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
von Willebrand factor type A domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_374_7
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(9500..10450)
-----------------
DNA (951bp)
protein (317aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FJ93_SORC5
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_374_8
unknown

Not on your lists

comp(10463..10558)
-----------------
DNA (96bp)
protein (32aa)

This feature has no annotations

ERMLT700_curated_scaffold_374_9
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(10595..11485)
-----------------
DNA (891bp)
protein (297aa)
hypothetical protein n=1 Tax=Cupriavidus sp. WS RepID=UPI0003805E3A
tadC; Tad secretion system, secretion accessory protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_374_10
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(11497..12459)
-----------------
DNA (963bp)
protein (321aa)
Flp pilus assembly protein TadB n=1 Tax=Variovorax sp. CF313 RepID=J2TDW9_9BURK
type II secretion system protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_374_11
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(12469..13797)
-----------------
DNA (1329bp)
protein (443aa)
Flp pilus assembly protein, ATPase CpaF n=1 Tax=Burkholderia sp. BT03 RepID=J3BPY0_9BURK
type II/IV secretion system protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_374_12
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(13823..14977)
-----------------
DNA (1155bp)
protein (385aa)
hypothetical protein n=1 Tax=Uliginosibacterium gangwonense RepID=UPI000360F0C1
response regulator receiver protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_374_13
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(14991..16112)
-----------------
DNA (1122bp)
protein (374aa)
hypothetical protein n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00037F2650
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_374_14
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(16164..17585)
-----------------
DNA (1422bp)
protein (474aa)
Type II and III secretion system protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01NX0_SOLUE
type II and III secretion system protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_374_15
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(17582..18442)
-----------------
DNA (861bp)
protein (287aa)
SAF domain n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01YZ0_SOLUE
SAF domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_374_16
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(18484..18960)
-----------------
DNA (477bp)
protein (159aa)
TadE-like protein n=1 Tax=Burkholderia sp. BT03 RepID=J2JBC3_9BURK
tadE-like family protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_374_17
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(18948..19460)
-----------------
DNA (513bp)
protein (171aa)
hypothetical protein n=1 Tax=Paenisporosarcina sp. TG20 RepID=UPI000310D625
peptidase A24A prepilin type IV
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_374_18
unknown

Not on your lists

comp(19468..19683)
-----------------
DNA (216bp)
protein (72aa)

This feature has no annotations

ERMLT700_curated_scaffold_374_19
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(19736..20356)
-----------------
DNA (621bp)
protein (207aa)
hypothetical protein n=1 Tax=Pannonibacter phragmitetus RepID=UPI00036D2555
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_374_20
unknown

Not on your lists

comp(20387..20656)
-----------------
DNA (270bp)
protein (90aa)

This feature has no annotations

ERMLT700_curated_scaffold_374_21
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(20829..21218)
-----------------
DNA (390bp)
protein (130aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI0003614532
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
ERMLT700_curated_scaffold_374_22

Not on your lists

comp(21226..22419)
-----------------
DNA (1194bp)
protein (398aa)
Transcriptional regulator {ECO:0000313|EMBL:AHN98016.1}; TaxID=1447243 species="Bacteria; environmental samples.;" source="uncultured bacterium lac193.;"
sigma-54 dependent transcriptional regulator id=12557439 bin=CNBR_ACIDO species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Fis family transcriptional regulator
ERMLT700_curated_scaffold_374_23
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(22647..22919)
-----------------
DNA (273bp)
protein (91aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
ERMLT700_curated_scaffold_374_24
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(23129..24478)
-----------------
DNA (1350bp)
protein (450aa)
hypothetical protein id=8267216 bin=CD_OP8_4m species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
Displaying 24 items

View Taxonomy