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ERMLT700_curated_scaffold_384

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMLT700_curated_scaffold_384_1
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(3..266)
-----------------
DNA (264bp)
protein (88aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_384_2
Bdellovibrio sp. ArHS, Bdellovibrio, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(971..1639)
-----------------
DNA (669bp)
protein (223aa)
Uncharacterized protein {ECO:0000313|EMBL:KHD88625.1}; TaxID=1569284 species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Bdellovibrionaceae; Bdellovibrio.;" source="Bdellovibrio sp. ArHS.;"
ERMLT700_curated_scaffold_384_3
unknown

Not on your lists

1884..2792
-----------------
DNA (909bp)
protein (303aa)

This feature has no annotations

ERMLT700_curated_scaffold_384_4
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

2859..3281
-----------------
DNA (423bp)
protein (141aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
ERMLT700_curated_scaffold_384_5
unknown

Not on your lists

3289..3738
-----------------
DNA (450bp)
protein (150aa)

This feature has no annotations

ERMLT700_curated_scaffold_384_6
unknown

Not on your lists

3752..4666
-----------------
DNA (915bp)
protein (305aa)

This feature has no annotations

ERMLT700_curated_scaffold_384_7
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(4659..6017)
-----------------
DNA (1359bp)
protein (453aa)
integrase family protein id=12556283 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
integrase family protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_384_trna_1
unknown

Not on your lists

comp(4730..4816)
-----------------
DNA (87bp)
transferRNA Ser
ERMLT700_curated_scaffold_384_8
Desulfonatronum thiodismutans, Desulfonatronum, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6014..6268)
-----------------
DNA (255bp)
protein (85aa)
hypothetical protein id=12556284 bin=CNBR_ACIDO species=Eggerthella sp. HGA1 genus=Eggerthella taxon_order=Coriobacteriales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Putative DNA binding domain protein, excisionase family (fragment)
Uncharacterized protein {ECO:0000313|EMBL:AIE18207.1}; TaxID=159290 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfonatronumaceae; Desulfonatronum.;" source="Desulfonatronum thiodismutans.;"
ERMLT700_curated_scaffold_384_9
unknown

Not on your lists

comp(6265..6489)
-----------------
DNA (225bp)
protein (75aa)
id=12556285 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ERMLT700_curated_scaffold_384_10
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(7733..8767)
-----------------
DNA (1035bp)
protein (345aa)
id=12556290 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
ERMLT700_curated_scaffold_384_11
R_Gammaproteobacteria_56_15, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8764..9705)
-----------------
DNA (942bp)
protein (314aa)
id=12556291 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_56_15_curated
ERMLT700_curated_scaffold_384_12
RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated, Bacteroidetes, Bacteria

Not on your lists

10156..10995
-----------------
DNA (840bp)
protein (280aa)
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated
ERMLT700_curated_scaffold_384_13

Not on your lists

11194..12510
-----------------
DNA (1317bp)
protein (439aa)
hypothetical protein n=1 Tax=Fischerella sp. PCC 9339 RepID=UPI0002D53527
Uncharacterized protein {ECO:0000313|EMBL:KKN17454.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
ERMLT700_curated_scaffold_384_14
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

12617..13255
-----------------
DNA (639bp)
protein (213aa)
Uncharacterized protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SLX5_METPP
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_384_15
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

13233..13673
-----------------
DNA (441bp)
protein (147aa)
hypothetical protein
Putative uncharacterized protein id=3984535 bin=GWC2_Methylomirabilis_70_16 species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_384_16
RBG_16_Zixibacteria_53_22_curated, Zixibacteria, Bacteria

Not on your lists

14010..15014
-----------------
DNA (1005bp)
protein (335aa)
Type I restriction-modification system specificity subunit n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GSF7_THISH
type I restriction-modification protein subunit M
Tax=RBG_16_Zixibacteria_53_22_curated
ERMLT700_curated_scaffold_384_17
unknown

Not on your lists

15071..15211
-----------------
DNA (141bp)
protein (47aa)

This feature has no annotations

ERMLT700_curated_scaffold_384_18
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

15222..17465
-----------------
DNA (2244bp)
protein (748aa)
Small GTP-binding protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QVV0_SPILD
small GTP-binding protein
Small GTP-binding protein {ECO:0000313|EMBL:ADB42932.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
ERMLT700_curated_scaffold_384_19
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(17884..20751)
-----------------
DNA (2868bp)
protein (956aa)
Serine/threonine protein kinase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q024W6_SOLUE
serine/threonine protein kinase
Serine/threonine protein kinase {ECO:0000313|EMBL:ABJ83460.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
ERMLT700_curated_scaffold_384_20
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(20770..21360)
-----------------
DNA (591bp)
protein (197aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q024W7_SOLUE
ECF subfamily RNA polymerase sigma-24 factor
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ABJ83459.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
ERMLT700_curated_scaffold_384_21
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

21430..22374
-----------------
DNA (945bp)
protein (315aa)
Uncharacterized protein n=2 Tax=Proteobacteria RepID=Q706Q9_PSEPU
hypothetical protein
Tax=RBG_16_Euryarchaeota_68_12_curated
ERMLT700_curated_scaffold_384_22
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22469..22801)
-----------------
DNA (333bp)
protein (111aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7D8Y2_BRAJP
HxlR family transcriptional regulator
Helix-turn-helix, HxlR type {ECO:0000313|EMBL:AHY54161.1}; TaxID=476282 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum SEMIA 5079.;"
Displaying 23 items

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