ggKbase home page

ERMLT700_curated_scaffold_556

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMLT700_curated_scaffold_556_1
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

2..883
-----------------
DNA (882bp)
protein (294aa)
id=12555892 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
phoL; phoH-like protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_556_2
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

876..1337
-----------------
DNA (462bp)
protein (154aa)
hypothetical protein; K07042 probable rRNA maturation factor id=12555893 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_556_3
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

1334..2578
-----------------
DNA (1245bp)
protein (415aa)
CBS domain-containing protein id=12555894 bin=CNBR_ACIDO species=Acidimicrobium ferrooxidans genus=Acidimicrobium taxon_order=Acidimicrobiales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_556_4
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

2580..3476
-----------------
DNA (897bp)
protein (299aa)
GTP-binding protein Era; K03595 GTP-binding protein Era id=12555895 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
GTP-binding protein Era
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_556_5
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

3604..4977
-----------------
DNA (1374bp)
protein (458aa)
Mg/Co/Ni transporter; K06213 magnesium transporter id=12555897 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
magnesium transporter
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_556_6
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

5003..5722
-----------------
DNA (720bp)
protein (240aa)
DNA repair protein RecO; K03584 DNA repair protein RecO (recombination protein O) id=12555898 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
DNA repair protein RecO
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_556_7
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

5731..6633
-----------------
DNA (903bp)
protein (301aa)
glyQ; glycyl-tRNA synthetase subunit alpha (EC:6.1.1.14); K01878 glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] id=12555899 bin=CNBR_ACIDO species=Megasphaera sp. BV3C16-1 genus=Megasphaera taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
glyQ; glycyl-tRNA synthetase subunit alpha (EC:6.1.1.14)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_556_8
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

6633..8837
-----------------
DNA (2205bp)
protein (735aa)
glycyl-tRNA synthetase subunit beta (EC:6.1.1.14); K01879 glycyl-tRNA synthetase beta chain [EC:6.1.1.14] id=12555900 bin=CNBR_ACIDO species=Thermodesulfatator atlanticus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
glyS; glycyl-tRNA synthetase subunit beta (EC:6.1.1.14)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_556_9
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

8878..11661
-----------------
DNA (2784bp)
protein (928aa)
pyruvate phosphate dikinase (EC:2.7.9.1); K01006 pyruvate,orthophosphate dikinase [EC:2.7.9.1] id=12555901 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
pyruvate phosphate dikinase (EC:2.7.9.1)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_556_10
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

11842..12810
-----------------
DNA (969bp)
protein (323aa)
corA; magnesium transport protein CorA; K03284 magnesium transporter id=12555902 bin=CNBR_ACIDO species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
magnesium and cobalt transporter CorA
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_556_11
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

12924..14696
-----------------
DNA (1773bp)
protein (591aa)
mutL; DNA mismatch repair protein; K03572 DNA mismatch repair protein MutL id=12555903 bin=CNBR_ACIDO species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
mutL; DNA mismatch repair protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
ERMLT700_curated_scaffold_556_12
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

14947..15882
-----------------
DNA (936bp)
protein (312aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_556_13
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(15979..17364)
-----------------
DNA (1386bp)
protein (462aa)
recombination factor protein RarA; K07478 putative ATPase id=12555925 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
recombination factor protein RarA
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMLT700_curated_scaffold_556_14
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(17361..18005)
-----------------
DNA (645bp)
protein (215aa)
tRNA/rRNA methyltransferase SpoU; K03437 RNA methyltransferase, TrmH family id=12555926 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
putative ribosomal RNA methyltransferase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
Displaying 14 items

View Taxonomy