ggKbase home page

ERMLT700_curated_scaffold_123_38

Organism: ERMLT700_Acidobacteria_63_19_curated

near complete RP 49 / 55 MC: 1 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: 42074..43027

Top 3 Functional Annotations

Value Algorithm Source
rluD; ribosomal large subunit pseudouridine synthase D (EC:4.2.1.70); K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] id=12556576 bin=CNBR_ACIDO species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 56.2
  • Coverage: 304.0
  • Bit_score: 322
  • Evalue 4.60e-85
pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 48.7
  • Coverage: 312.0
  • Bit_score: 292
  • Evalue 8.50e-77
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 73.1
  • Coverage: 320.0
  • Bit_score: 478
  • Evalue 7.10e-132

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Acidobacteria_67_21 → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 954
GTGGAGCCGCTCGAATTCTCCGTCACGCCTGAATCGGAGGGGCAGCGGCTCGATCGCTTCCTGGTCACGGTCCTTGGTGATCATTCGCGATCGCAGATCCAGAAGCTGATCACCGACGGCCACGTGCATGTCTCCGCACGCGATGCCCGCCCGAATCTCGCCGTTCGCGCGGGCGATCGCGTGGTCGTCAGTCTCCCCGACGCGGCTCCCTCGACCATCGAGGCGGAAGCCGTCTCCCTGGAAATCCTGTACCAGGATGCCGAACTCGTGGTGATCAACAAGCCGCCAGGCATGGTCGTGCACCCCGGAGCGGGCCACGCTTCGGGGACCCTCGTGAACGCATTGCTCCATCACATCACGGACTTGGGCGGAGTCGGCGGCGAGCTCCGTCCCGGCATCGTGCACCGACTGGATCGCGGGACCTCTGGCGTGATGGTGGTCGCGAAAAACGACGCCGCGCTTCAGGAGCTGTCGCGCCAGTTTCACGATCGCGAGGTCGAGAAGGAGTACATCGCGCTCGTCTGGGGCGTCGTGCAGGCGGGACGCCGCATCGATGCCGCGATCGGACGCGACCCGGTCCATCGTCAGAAGATGTCCTCGCGGTCGAGACACGCGCGCGAGGCGGTCACACGGATCACGAGGGCCTTTCACCTGCCTGGACTGACGCTGTGCCAGGTCGCCATCCACACGGGGCGTACGCATCAGATTCGTGTCCATCTCAGCGCCATCGGACACCCGATTGTCGGCGATGCGCTCTATGGCGGCGTGCATCGACGCGTTCCTGGCGACATTCGCGCGGTGCAGCGGCTTCAGCGGCCGTTTCTGCACTCGACACGCCTGGCATTCGCTCACCCGCGCGACGGCCGCCGCATGGAATTCAGCGCCAACCTCCCGCCTGATCTACTGGACGTACTGGAATCGCTTCCGGGGTGGGGCGACCGCGAAGAGGAGTGA
PROTEIN sequence
Length: 318
VEPLEFSVTPESEGQRLDRFLVTVLGDHSRSQIQKLITDGHVHVSARDARPNLAVRAGDRVVVSLPDAAPSTIEAEAVSLEILYQDAELVVINKPPGMVVHPGAGHASGTLVNALLHHITDLGGVGGELRPGIVHRLDRGTSGVMVVAKNDAALQELSRQFHDREVEKEYIALVWGVVQAGRRIDAAIGRDPVHRQKMSSRSRHAREAVTRITRAFHLPGLTLCQVAIHTGRTHQIRVHLSAIGHPIVGDALYGGVHRRVPGDIRAVQRLQRPFLHSTRLAFAHPRDGRRMEFSANLPPDLLDVLESLPGWGDREEE*