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04302015_20_scaffold_191

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Displaying items 1-30 of 38 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_20_scaffold_191_1
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..483
DNA (483bp) protein (161aa)
Carbohydrate ABC transporter membrane protein 1, CUT1 family n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5G2W0_ACICJ
binding-protein-dependent transport system inner membrane protein; K05814 sn-glycerol 3-phosphate transport system permease protein
Carbohydrate ABC transporter membrane protein 1, CUT1 family {ECO:0000313|EMBL:ABQ32192.1}; Flags: Precursor;; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
04302015_20_scaffold_191_2
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

483..1319
DNA (837bp) protein (279aa)
sn-glycerol-3-phosphate ABC transporter permease protein n=2 Tax=Acidiphilium RepID=F0J6S5_ACIMA
ugpE; sn-glycerol-3-phosphate ABC transporter permease; K05815 sn-glycerol 3-phosphate transport system permease protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:EGO94324.1}; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
04302015_20_scaffold_191_3
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1319..2383
DNA (1065bp) protein (355aa)
ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein (EC:3.6.3.20); K05816 sn-glycerol 3-phosphate transport system ATP-binding protein [EC:3.6.3.20]
sn-glycerol-3-phosphate ABC transporter ATP-binding protein n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5XP70_9PROT
sn-glycerol-3-phosphate ABC transporter ATP-binding protein {ECO:0000313|EMBL:EKM98484.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
04302015_20_scaffold_191_4
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2380..3168)
DNA (789bp) protein (263aa)
Beta-lactamase domain protein n=3 Tax=Acidiphilium RepID=A5FYE9_ACICJ
beta-lactamase domain-containing protein
Uncharacterized protein {ECO:0000313|EMBL:BAJ80816.1}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
04302015_20_scaffold_191_5
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3192..4478)
DNA (1287bp) protein (429aa)
putative iron-containing alcohol dehydrogenase (EC:1.1.1.-)
Iron-containing alcohol dehydrogenase n=2 Tax=Acidiphilium RepID=A5FYE8_ACICJ
Iron-containing alcohol dehydrogenase {ECO:0000313|EMBL:ABQ30630.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
04302015_20_scaffold_191_6
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4634..4897)
DNA (264bp) protein (88aa)
UPF0335 protein Acry_0180 n=3 Tax=Acidiphilium RepID=A5FUX6_ACICJ
hypothetical protein
UPF0335 protein APM_1084 {ECO:0000256|HAMAP-Rule:MF_00797}; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
04302015_20_scaffold_191_7
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4949..5254)
DNA (306bp) protein (102aa)
alkaline phosphatase n=1 Tax=Elioraea tepidiphila RepID=UPI00036A3931
hypothetical protein; K09948 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDM66452.1}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
04302015_20_scaffold_191_8
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5353..6606
DNA (1254bp) protein (418aa)
hydroxypyruvate reductase (EC:1.1.1.81); K00050 hydroxypyruvate reductase [EC:1.1.1.81]
MOFRL family protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A4H7_9PROT
MOFRL family protein {ECO:0000313|EMBL:EHL98202.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
04302015_20_scaffold_191_9
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6614..8038
DNA (1425bp) protein (475aa)
pyruvate kinase (EC:2.7.1.40); K00873 pyruvate kinase [EC:2.7.1.40]
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
Pyruvate kinase n=2 Tax=Acidiphilium RepID=A5FUX4_ACICJ
04302015_20_scaffold_191_10
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8097..10136
DNA (2040bp) protein (680aa)
Transketolase {ECO:0000256|RuleBase:RU004996}; EC=2.2.1.1 {ECO:0000256|RuleBase:RU004996};; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
transketolase; K00615 transketolase [EC:2.2.1.1]
Transketolase n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5ZPM6_9PROT
04302015_20_scaffold_191_11
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10149..11162
DNA (1014bp) protein (338aa)
gap; glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.12); K00134 glyceraldehyde 3-phosphate dehydrogenase [EC:1.2.1.12]
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
Glyceraldehyde-3-phosphate dehydrogenase n=3 Tax=Acidiphilium RepID=A5FXV0_ACICJ
04302015_20_scaffold_191_12
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11166..12359
DNA (1194bp) protein (398aa)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
pgk; phosphoglycerate kinase (EC:2.7.2.3); K00927 phosphoglycerate kinase [EC:2.7.2.3]
Phosphoglycerate kinase n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5Z2T0_9PROT
04302015_20_scaffold_191_13
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12308..13198
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5Z262_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EKN01219.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
hypothetical protein
04302015_20_scaffold_191_14
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13534..14052
DNA (519bp) protein (173aa)
Putative NUDIX family protein n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4TJ66_9RHIZ
Putative NUDIX family protein {ECO:0000313|EMBL:ESR25968.1}; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
hypothetical protein
04302015_20_scaffold_191_15
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14087..15265
DNA (1179bp) protein (393aa)
Glycosyl transferase, group 1 n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TRE8_9BRAD
Glycosyl transferase, group 1 {ECO:0000313|EMBL:CCE09036.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
group 1 glycosyl transferase
04302015_20_scaffold_191_16
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15247..17376)
DNA (2130bp) protein (710aa)
TPR repeat-containing protein n=1 Tax=Acidiphilium sp. PM RepID=F7S914_9PROT
TPR repeat-containing protein {ECO:0000313|EMBL:KDM68318.1}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
hypothetical protein
04302015_20_scaffold_191_17

Not on your lists

comp(17373..18680)
DNA (1308bp) protein (436aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002FC77E3
Methyltransferase type 12 {ECO:0000313|EMBL:EKD38126.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
04302015_20_scaffold_191_18
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18724..19608)
DNA (885bp) protein (295aa)
Uncharacterized protein n=2 Tax=Acidiphilium RepID=F0J196_ACIMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ29333.1}; Flags: Precursor;; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
04302015_20_scaffold_191_19
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19615..19974)
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RP64_9PROT
Uncharacterized protein {ECO:0000313|EMBL:GAN78219.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
04302015_20_scaffold_191_20
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19971..20444)
DNA (474bp) protein (158aa)
Flagellar biosynthesis regulator FlbT-like protein n=3 Tax=Acidiphilium RepID=A5FUQ3_ACICJ
flbT; putative flagellar FlbT; K06601 flagellar protein FlbT
Flagellar biosynthesis regulator FlbT-like protein {ECO:0000313|EMBL:ABQ29335.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
04302015_20_scaffold_191_21
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20519..21376)
DNA (858bp) protein (286aa)
Flagellin domain-containing protein n=1 Tax=Acidiphilium sp. PM RepID=F7S920_9PROT
Flagellin domain-containing protein {ECO:0000313|EMBL:EGO94360.1}; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
flagellin; K02406 flagellin
04302015_20_scaffold_191_22
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21480..22559)
DNA (1080bp) protein (360aa)
Uncharacterized protein n=2 Tax=Acidiphilium RepID=F0J199_ACIMA
hypothetical protein; K02397 flagellar hook-associated protein 3 FlgL
Uncharacterized protein {ECO:0000313|EMBL:BAJ79481.1}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
04302015_20_scaffold_191_23
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22564..24087)
DNA (1524bp) protein (508aa)
Flagellar hook-associated protein FlgK n=1 Tax=Acidiphilium sp. PM RepID=F7S1F0_9PROT
Flagellar hook-associated protein FlgK {ECO:0000313|EMBL:GAN78215.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
flgK; flagellar hook-associated protein; K02396 flagellar hook-associated protein 1 FlgK
04302015_20_scaffold_191_24
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24108..25418)
DNA (1311bp) protein (437aa)
FlgE n=1 Tax=Acidiphilium sp. PM RepID=F7S1F1_9PROT
Flagellar hook protein FlgE {ECO:0000313|EMBL:GAN78214.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
flgE; flagellar hook protein FlgE; K02390 flagellar hook protein FlgE
04302015_20_scaffold_191_25
unknown

Not on your lists

comp(25546..26199)
DNA (654bp) protein (218aa)

This feature has no annotations

04302015_20_scaffold_191_26
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26576..27106
DNA (531bp) protein (177aa)
Uncharacterized protein n=2 Tax=Acidiphilium RepID=F0J1A2_ACIMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ29340.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
04302015_20_scaffold_191_27
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27138..27866
DNA (729bp) protein (243aa)
Flagellar hook capping protein n=3 Tax=Acidiphilium RepID=A5FUQ9_ACICJ
flgD; putative flagellar hook capping protein; K02389 flagellar basal-body rod modification protein FlgD
Flagellar hook capping protein {ECO:0000313|EMBL:ABQ29341.1}; Flags: Precursor;; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
04302015_20_scaffold_191_28
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28026..29669
DNA (1644bp) protein (548aa)
Flagellar M-ring protein n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5FYK1_ACICJ
flagellar M-ring protein FliF; K02409 flagellar M-ring protein FliF
Flagellar M-ring protein {ECO:0000256|PIRNR:PIRNR004862}; Flags: Precursor;; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
04302015_20_scaffold_191_29
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29666..30679
DNA (1014bp) protein (338aa)
flagellar motor switch protein FliG n=1 Tax=Elioraea tepidiphila RepID=UPI00036AE7E4 rbh
Flagellar motor switch protein FliG {ECO:0000256|PIRNR:PIRNR003161}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
fliG; flagellar motor switch protein G; K02410 flagellar motor switch protein FliG rbh
04302015_20_scaffold_191_30
Gluconobacter oxydans, Gluconobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30700..31041
DNA (342bp) protein (114aa)
Flagellar motor switch protein FliN n=1 Tax=Gluconobacter oxydans (strain 621H) RepID=Q5FTU2_GLUOX
flagellar motor switch protein; K02417 flagellar motor switch protein FliN/FliY
Flagellar motor switch protein FliN {ECO:0000313|EMBL:AAW60204.1}; TaxID=290633 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconobacter.;" source="Gluconobacter oxydans (strain 621H) (Gluconobacter suboxydans).;"
Displaying items 1-30 of 38 in total

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