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04302015_20_scaffold_194

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Displaying items 1-30 of 46 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_20_scaffold_194_1
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(482..1918)
DNA (1437bp) protein (479aa)
gluconate 2-dehydrogenase (EC:1.1.99.3)
Gluconate 2-dehydrogenase (Acceptor) {ECO:0000313|EMBL:EGO94091.1}; EC=1.1.99.3 {ECO:0000313|EMBL:EGO94091.1};; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
Gluconate 2-dehydrogenase n=2 Tax=Acidiphilium RepID=F0J108_ACIMA
04302015_20_scaffold_194_2
unknown

Not on your lists

2061..2237
DNA (177bp) protein (59aa)

This feature has no annotations

04302015_20_scaffold_194_3
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2372..3064)
DNA (693bp) protein (231aa)
Nitrogen fixation regulation protein FixK n=3 Tax=Acidiphilium RepID=F0IZ12_ACIMA
fixK; nitrogen fixation regulation protein FixK; K01420 CRP/FNR family transcriptional regulator, anaerobic regulatory protein
Transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:ABQ30837.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
04302015_20_scaffold_194_4
unknown

Not on your lists

comp(3209..3487)
DNA (279bp) protein (93aa)

This feature has no annotations

04302015_20_scaffold_194_5
unknown

Not on your lists

comp(3510..3938)
DNA (429bp) protein (143aa)

This feature has no annotations

04302015_20_scaffold_194_6
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3940..4200)
DNA (261bp) protein (87aa)
DNA-binding transcriptional regulator of psp operon n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z863_AZOL4
Phage-shock protein {ECO:0000313|EMBL:EWY39157.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
pspB; DNA-binding transcriptional regulator of psp operon; K03970 phage shock protein B
04302015_20_scaffold_194_7
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4204..4878)
DNA (675bp) protein (225aa)
Phage shock protein A n=1 Tax=Azospirillum amazonense Y2 RepID=G1XYY0_9PROT
Phage-shock protein {ECO:0000313|EMBL:KJB92285.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
pspA; phage shock protein A; K03969 phage shock protein A
04302015_20_scaffold_194_8
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5000..6058
DNA (1059bp) protein (353aa)
DNA-binding transcriptional activator n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AH59_AZOBR rbh
pspF; DNA-binding transcriptional activator rbh
DNA-binding transcriptional activator {ECO:0000313|EMBL:CCC96778.1}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;"
04302015_20_scaffold_194_9
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6090..6596)
DNA (507bp) protein (169aa)
Protein-export protein SecB n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0IZH2_ACIMA
secB; protein-export protein SecB; K03071 preprotein translocase subunit SecB
Protein-export protein SecB {ECO:0000256|HAMAP-Rule:MF_00821}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
04302015_20_scaffold_194_10
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6746..7687
DNA (942bp) protein (314aa)
N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38); K00145 N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|HAMAP-Rule:MF_01110, ECO:0000256|SAAS:SAAS00015955}; Short=AGPR {ECO:0000256|HAMAP-Rule:MF_01110};; EC=1.2.1.38 {ECO:0000256|HAMAP-Rule:MF_01110, ECO:0000256|SAAS:SAAS00015955};; N-acetyl-glutamate semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01110}; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8ENM8_METSB
04302015_20_scaffold_194_11
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7680..8252
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0IYN1_ACIMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAJ80891.1}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
04302015_20_scaffold_194_12
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8272..8850
DNA (579bp) protein (193aa)
Putative uncharacterized protein n=1 Tax=Acidiphilium sp. PM RepID=F7S2Y9_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EGO96430.1}; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
hypothetical protein
04302015_20_scaffold_194_13
Burkholderia gladioli, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9071..9715)
DNA (645bp) protein (215aa)
pyrrolidone-carboxylate peptidase; K01304 pyroglutamyl-peptidase [EC:3.4.19.3]
Pyrrolidone-carboxylate peptidase {ECO:0000256|HAMAP-Rule:MF_00417}; EC=3.4.19.3 {ECO:0000256|HAMAP-Rule:MF_00417};; 5-oxoprolyl-peptidase {ECO:0000256|HAMAP-Rule:MF_00417}; Pyroglutamyl-peptidase I {ECO:0000256|HAMAP-Rule:MF_00417}; TaxID=999541 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia gladioli (strain BSR3).;"
Pyrrolidone-carboxylate peptidase n=1 Tax=Burkholderia gladioli (strain BSR3) RepID=F2LJQ2_BURGS
04302015_20_scaffold_194_14
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10134..10985
DNA (852bp) protein (284aa)
hypothetical protein n=1 Tax=Leeia oryzae RepID=UPI00036F7DC0 rbh
Band 7 protein {ECO:0000313|EMBL:CDX21797.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
Putative stomatin/prohibitin-family membrane protease subunit rbh
04302015_20_scaffold_194_15
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10995..11600)
DNA (606bp) protein (202aa)
Uncharacterized protein n=3 Tax=Acidiphilium RepID=A5FUG0_ACICJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ29242.1}; Flags: Precursor;; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
04302015_20_scaffold_194_16
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11619..12047)
DNA (429bp) protein (143aa)
CrtK protein n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BRL2_GRABC
Transcriptional negative regulator of photosynthesis CrtK/TspO/MBR {ECO:0000313|EMBL:GAN76628.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
crtK protein; K07185 tryptophan-rich sensory protein
04302015_20_scaffold_194_17
unknown

Not on your lists

comp(12189..12347)
DNA (159bp) protein (53aa)

This feature has no annotations

04302015_20_scaffold_194_18
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12404..12796)
DNA (393bp) protein (131aa)
LysR family transcriptional regulator n=2 Tax=Acidiphilium RepID=F0J0H4_ACIMA
ModE family transcriptional regulator; K02019 molybdate transport system regulatory protein
LysR family transcriptional regulator {ECO:0000313|EMBL:KDM68559.1}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
04302015_20_scaffold_194_19

Not on your lists

12894..13805
DNA (912bp) protein (304aa)
Putative ABC-type transport system, periplasmic component n=1 Tax=mine drainage metagenome RepID=E6PMJ1_9ZZZZ
Putative ABC-type transport system, periplasmic component {ECO:0000313|EMBL:CBH96143.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein; K02061 putative sulfate transport system substrate-binding protein
04302015_20_scaffold_194_20
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13806..14555
DNA (750bp) protein (250aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5FUF6_ACICJ
binding-protein-dependent transport system inner membrane protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ABQ29238.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
04302015_20_scaffold_194_21
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14552..15547
DNA (996bp) protein (332aa)
Putative ABC transporter, ATPase components {ECO:0000313|EMBL:CDQ11342.1}; EC=3.6.3.29 {ECO:0000313|EMBL:CDQ11342.1};; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
ABC transporter; K02017 molybdate transport system ATP-binding protein [EC:3.6.3.29]
ABC transporter related protein n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JPQ9_9GAMM
04302015_20_scaffold_194_22
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15802..16689)
DNA (888bp) protein (296aa)
HflC protein; K04087 membrane protease subunit HflC [EC:3.4.-.-]
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002E2D98E
Protein HflC {ECO:0000256|PIRNR:PIRNR005651}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
04302015_20_scaffold_194_23
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16686..17852)
DNA (1167bp) protein (389aa)
HflK protein; K04088 membrane protease subunit HflK [EC:3.4.-.-] rbh
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI000309F451 rbh
HflK protein {ECO:0000313|EMBL:EHL97260.1}; Flags: Fragment;; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
04302015_20_scaffold_194_24
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17914..18987
DNA (1074bp) protein (358aa)
GTP-binding protein n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5ZLX5_9PROT
GTP-binding protein {ECO:0000313|EMBL:EKN00366.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
Mrp-like protein; K03593 ATP-binding protein involved in chromosome partitioning
04302015_20_scaffold_194_25
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18992..19441
DNA (450bp) protein (150aa)
DNA polymerase III subunit chi (EC:2.7.7.7); K02339 DNA polymerase III subunit chi [EC:2.7.7.7]
DNA polymerase III, chi subunit {ECO:0000313|EMBL:ABI63101.1}; EC=2.7.7.7 {ECO:0000313|EMBL:ABI63101.1};; TaxID=391165 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1).;"
DNA polymerase III subunit chi n=1 Tax=Roseomonas sp. B5 RepID=UPI0002E5B6E3
04302015_20_scaffold_194_26
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19467..19934
DNA (468bp) protein (156aa)
aroQ; 3-dehydroquinate dehydratase (EC:4.2.1.10); K03786 3-dehydroquinate dehydratase II [EC:4.2.1.10]
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752};; Type II DHQase {ECO:0000256|HAMAP-Rule:MF_00169}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
3-dehydroquinate dehydratase n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J3A4_ACIMA
04302015_20_scaffold_194_27
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19931..20407
DNA (477bp) protein (159aa)
accB; acetyl-CoA carboxylase biotin carboxyl carrier protein (EC:6.4.1.2); K02160 acetyl-CoA carboxylase biotin carboxyl carrier protein
Acetyl-CoA carboxylase biotin carboxyl carrier protein {ECO:0000313|EMBL:BAJ82051.1}; EC=6.4.1.2 {ECO:0000313|EMBL:BAJ82051.1};; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
Acetyl-CoA carboxylase biotin carboxyl carrier protein n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J3A5_ACIMA
04302015_20_scaffold_194_28
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20412..21773
DNA (1362bp) protein (454aa)
Biotin carboxylase AccC {ECO:0000313|EMBL:KDM65416.1}; EC=6.3.4.14 {ECO:0000313|EMBL:KDM65416.1};; EC=6.4.1.2 {ECO:0000313|EMBL:KDM65416.1};; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
accC; acetyl-CoA carboxylase biotin carboxylase (EC:6.3.4.14 6.4.1.2); K01961 acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
Acetyl-CoA carboxylase biotin carboxylase n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J3A6_ACIMA
04302015_20_scaffold_194_29
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21967..25575)
DNA (3609bp) protein (1203aa)
Hydantoinase/oxoprolinase {ECO:0000313|EMBL:EFH12799.1}; EC=3.5.2.9 {ECO:0000313|EMBL:EFH12799.1};; Flags: Fragment;; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
5-oxoprolinase (EC:3.5.2.9); K01469 5-oxoprolinase (ATP-hydrolysing) [EC:3.5.2.9]
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00036F0342
04302015_20_scaffold_194_30
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25767..26225
DNA (459bp) protein (153aa)
MarR family transcriptional regulator n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0IZW0_ACIMA
MarR family transcriptional regulator
MarR family transcriptional regulator {ECO:0000313|EMBL:BAJ81320.1}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
Displaying items 1-30 of 46 in total

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