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04302015_20_scaffold_290

Search features with annotation key words

Displaying 24 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_20_scaffold_290_1
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..99
DNA (99bp) protein (33aa)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
methylenetetrahydrofolate reductase (EC:1.5.1.20); K00297 methylenetetrahydrofolate reductase (NADPH) [EC:1.5.1.20]
Methylenetetrahydrofolate reductase n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5YWX7_9PROT
04302015_20_scaffold_290_2
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

96..2276
DNA (2181bp) protein (727aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
uvrD; DNA helicase II (EC:3.6.4.12); K03657 DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12]
DNA helicase II n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5YK97_9PROT
04302015_20_scaffold_290_3
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2266..3153
DNA (888bp) protein (296aa)
ribosomal L11 methyltransferase; K02687 ribosomal protein L11 methyltransferase [EC:2.1.1.-]
50S ribosomal protein L11 methyltransferase n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5ZIJ8_9PROT rbh
Ribosomal protein L11 methyltransferase {ECO:0000313|EMBL:GAN79749.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
04302015_20_scaffold_290_4
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3150..3386)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5YL04_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EKM99541.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
04302015_20_scaffold_290_5
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3536..5314
DNA (1779bp) protein (593aa)
xaa-Pro aminopeptidase (EC:3.4.11.9); K01262 Xaa-Pro aminopeptidase [EC:3.4.11.9]
Xaa-Pro aminopeptidase n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5ZJC5_9PROT
Xaa-Pro aminopeptidase {ECO:0000313|EMBL:GAN80517.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
04302015_20_scaffold_290_6
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5392..5925
DNA (534bp) protein (178aa)
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
2'-5' RNA ligase; K01975 2'-5' RNA ligase [EC:6.5.1.-]
Putative 2'-5' RNA ligase n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5XSD4_9PROT
04302015_20_scaffold_290_7
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5922..6707)
DNA (786bp) protein (262aa)
Putative uncharacterized protein n=1 Tax=Acidiphilium sp. PM RepID=F7S4T5_9PROT
class II aldolase/adducin family protein
Uncharacterized protein {ECO:0000313|EMBL:EGO95814.1}; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
04302015_20_scaffold_290_8
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6760..7911)
DNA (1152bp) protein (384aa)
Beta-lactamase n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q13EJ6_RHOPS
beta-lactamase
Beta-lactamase {ECO:0000313|EMBL:ABE37493.1}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
04302015_20_scaffold_290_9
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8037..9527
DNA (1491bp) protein (497aa)
Glycerol kinase {ECO:0000256|HAMAP-Rule:MF_00186}; EC=2.7.1.30 {ECO:0000256|HAMAP-Rule:MF_00186};; ATP:glycerol 3-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00186}; Glycerokinase {ECO:0000256|HAMAP-Rule:MF_00186}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
glycerol kinase; K00864 glycerol kinase [EC:2.7.1.30]
Glycerol kinase n=2 Tax=Acidiphilium RepID=GLPK_ACICJ
04302015_20_scaffold_290_10
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9501..10532)
DNA (1032bp) protein (344aa)
Gluconolactonase family protein n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5YHQ6_9PROT
Uncharacterized protein {ECO:0000313|EMBL:GAN79651.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
hypothetical protein
04302015_20_scaffold_290_11
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10647..11465)
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5ZPI4_9PROT
Uncharacterized protein {ECO:0000313|EMBL:GAN81015.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
hypothetical protein; K09769 hypothetical protein
04302015_20_scaffold_290_12
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11462..12508)
DNA (1047bp) protein (349aa)
DNA replication and repair protein RecF n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5FW24_ACICJ
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|SAAS:SAAS00122784}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
recF; recombination protein F; K03629 DNA replication and repair protein RecF
04302015_20_scaffold_290_13
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12598..13722)
DNA (1125bp) protein (375aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
DNA polymerase III subunit beta (EC:2.7.7.7); K02338 DNA polymerase III subunit beta [EC:2.7.7.7]
DNA polymerase III subunit beta n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5XX83_9PROT
04302015_20_scaffold_290_14
Brevundimonas sp. EAKA, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13827..14357
DNA (531bp) protein (177aa)
Putative uncharacterized protein n=1 Tax=Brevundimonas sp. BAL3 RepID=B4WBW9_9CAUL
Isoprenylcysteine carboxyl methyltransferase {ECO:0000313|EMBL:KDP96001.1}; TaxID=1495854 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas sp. EAKA.;"
isoprenylcysteine carboxyl methyltransferase
04302015_20_scaffold_290_15
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14511..16547
DNA (2037bp) protein (679aa)
Transketolase {ECO:0000256|RuleBase:RU004996}; EC=2.2.1.1 {ECO:0000256|RuleBase:RU004996};; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
tkt; transketolase (EC:2.2.1.1); K00615 transketolase [EC:2.2.1.1]
Transketolase n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5ZPM6_9PROT
04302015_20_scaffold_290_16
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16550..17563
DNA (1014bp) protein (338aa)
gap; glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.12); K00134 glyceraldehyde 3-phosphate dehydrogenase [EC:1.2.1.12]
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
Glyceraldehyde-3-phosphate dehydrogenase n=3 Tax=Acidiphilium RepID=A5FXV0_ACICJ
04302015_20_scaffold_290_17
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17565..18773
DNA (1209bp) protein (403aa)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
pgk; phosphoglycerate kinase (EC:2.7.2.3); K00927 phosphoglycerate kinase [EC:2.7.2.3]
Phosphoglycerate kinase n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5Z2T0_9PROT
04302015_20_scaffold_290_18
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18872..19654
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5Z262_9PROT
Uncharacterized protein {ECO:0000313|EMBL:GAN80797.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
hypothetical protein
04302015_20_scaffold_290_19
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19636..20046)
DNA (411bp) protein (137aa)
Flagellar biosynthesis regulator FlbT-like protein n=3 Tax=Acidiphilium RepID=A5FUQ3_ACICJ
flagellar biosynthesis regulator FlbT-like protein
Flagellar biosynthesis regulator FlbT-like protein {ECO:0000313|EMBL:EGO94358.1}; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
04302015_20_scaffold_290_20
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20254..20949)
DNA (696bp) protein (232aa)
Short chain dehydrogenase n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5YQS2_9PROT
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:GAN81023.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
short chain dehydrogenase
04302015_20_scaffold_290_21
unknown

Not on your lists

comp(21048..21356)
DNA (309bp) protein (103aa)

This feature has no annotations

04302015_20_scaffold_290_22
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21438..21959)
DNA (522bp) protein (174aa)
Ribosomal protein N-acetylase-like protein n=1 Tax=Acidiphilium sp. PM RepID=F7S9J8_9PROT
Acetyltransferase {ECO:0000313|EMBL:GAN79001.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
putative acetyltransferase
04302015_20_scaffold_290_23
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21996..23675)
DNA (1680bp) protein (560aa)
ABC transporter ATP-binding protein n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5YRH5_9PROT rbh
ABC transporter {ECO:0000313|EMBL:GAN79002.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
putative ABC transporter ATP-binding protein
04302015_20_scaffold_290_24
Komagataeibacter rhaeticus, Komagataeibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23980..24096
DNA (117bp) protein (39aa)
inorganic pyrophosphatase; K01507 inorganic pyrophosphatase [EC:3.6.1.1]
Inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00209}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_00209};; Pyrophosphate phospho-hydrolase {ECO:0000256|HAMAP-Rule:MF_00209}; TaxID=1432055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Komagataeibacter.;" source="Komagataeibacter rhaeticus AF1.;"
inorganic pyrophosphatase n=1 Tax=Gluconacetobacter europaeus RepID=UPI000237DAEE
Displaying 24 items

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