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04302015_12_scaffold_129

Search features with annotation key words

Displaying items 1-30 of 31 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_12_scaffold_129_1
unknown

Not on your lists

comp(1..495)
DNA (495bp) protein (165aa)

This feature has no annotations

04302015_12_scaffold_129_2
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(560..1237)
DNA (678bp) protein (226aa)
Lipoprotein-releasing system ATP-binding protein LolD {ECO:0000256|HAMAP-Rule:MF_01708}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01708};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria;
ABC transporter ATP-binding protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI000174557B
ABC transporter; K02003 putative ABC transport system ATP-binding protein
04302015_12_scaffold_129_3
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(1277..1738)
DNA (462bp) protein (154aa)
Putative tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase {ECO:0000256|HAM
tRNA/rRNA methyltransferase SpoU; K03216 tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
tRNA methyltransferase n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001746BF2
04302015_12_scaffold_129_4
uncultured Desulfofustis sp. PB-SRB1, Desulfofustis, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1745..2251)
DNA (507bp) protein (169aa)
hypothetical protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI000174633A
Uncharacterized protein {ECO:0000313|EMBL:ESQ10243.1}; TaxID=1385624 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfofustis; environmental samples.;
04302015_12_scaffold_129_5
RBG_13_WOR_2_41_10_curated, WOR-2, Bacteria

Not on your lists

comp(2299..2649)
DNA (351bp) protein (117aa)
hypothetical protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI000174631F
17 kDa surface antigen
Tax=RBG_13_WOR_2_41_10_curated
04302015_12_scaffold_129_6
RBG_13_WOR_2_41_10_curated, WOR-2, Bacteria

Not on your lists

comp(2689..2925)
DNA (237bp) protein (79aa)
hypothetical protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001745B4C
OmpA/MotB domain-containing protein
Tax=RBG_13_WOR_2_41_10_curated
04302015_12_scaffold_129_7
unknown

Not on your lists

3136..3750
DNA (615bp) protein (205aa)
hypothetical protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001744C42
04302015_12_scaffold_129_8
Criblamydia sequanensis, Criblamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(3754..4881)
DNA (1128bp) protein (376aa)
Putative o-succinylbenzoate-CoA ligase {ECO:0000313|EMBL:CDR33679.1}; EC=6.2.1.26 {ECO:0000313|EMBL:CDR33679.1};; TaxID=340071 species="Bacteria; Chlamydiae; Chlamydiales; Criblamydiaceae; Criblamydia
menE; O-succinylbenzoate-CoA ligase n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001744E5A rbh
menE; menE, O-succinylbenzoate-CoA ligase
04302015_12_scaffold_129_9
Akkermansia muciniphila CAG:154, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(4866..5831)
DNA (966bp) protein (322aa)
hypothetical protein; K02549 O-succinylbenzoate synthase [EC:4.2.1.113]
hypothetical protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001744E5B rbh
Uncharacterized protein {ECO:0000313|EMBL:CDB55255.1}; TaxID=1263034 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" so
04302015_12_scaffold_129_10
R_Bdellovibrionales_40_15, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(5897..6793)
DNA (897bp) protein (299aa)
1,4-dihydroxy-2-naphthoate octaprenyltransferase; K02548 1,4-dihydroxy-2-naphthoate octaprenyltransferase [EC:2.5.1.74 2.5.1.-]
1,4-dihydroxy-2-naphthoate octaprenyltransferase n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001744E5C rbh
Tax=RIFCSPHIGHO2_02_FULL_Bdellovibrionales_40_15_curated
04302015_12_scaffold_129_11
Lentisphaera araneosa, Lentisphaera, Lentisphaerales, Lentisphaeria, Lentisphaerae, Bacteria

Not on your lists

comp(6836..9682)
DNA (2847bp) protein (949aa)
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AB-629-E09 RepID=UPI0003665A63
Uncharacterized protein {ECO:0000313|EMBL:EDM27000.1}; TaxID=313628 species="Bacteria; Lentisphaerae; Lentisphaeria; Lentisphaerales; Lentisphaeraceae; Lentisphaera.;" source="Lentisphaera araneosa HT
membrane-bound dehydrogenase domain-containing protein
04302015_12_scaffold_129_12
unknown

Not on your lists

9716..9997
DNA (282bp) protein (94aa)

This feature has no annotations

04302015_12_scaffold_129_13
Turneriella parva, Turneriella, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

9969..10370
DNA (402bp) protein (134aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; T
Ribonuclease VapC n=1 Tax=Turneriella parva (strain ATCC BAA-1111 / DSM 21527 / NCTC 11395 / H) RepID=I4B3T7_TURPD
PilT protein domain protein
04302015_12_scaffold_129_14
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

10370..12640
DNA (2271bp) protein (757aa)
Probable serine protease n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001745857
Uncharacterized protein {ECO:0000313|EMBL:EDL56465.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
peptidase S1 and S6 chymotrypsin/Hap
04302015_12_scaffold_129_15
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12650..13492)
DNA (843bp) protein (281aa)
Methyltransferase type 11 n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9YD58_HALP7
type 11 methyltransferase
Tax=GWA2_Rhodocyclales_65_20_curated
04302015_12_scaffold_129_16
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

13572..14552
DNA (981bp) protein (327aa)
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-B23 RepID=UPI000363DCB1
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:EDY19148.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus El
ErfK/YbiS/YhnG family protein
04302015_12_scaffold_129_17
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

14562..15977
DNA (1416bp) protein (472aa)
MlrC domain protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CWN2_9BACT rbh
MlrC domain protein {ECO:0000313|EMBL:EDY21824.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
MlrC domain-containing protein
04302015_12_scaffold_129_18
unknown

Not on your lists

16109..16372
DNA (264bp) protein (88aa)

This feature has no annotations

04302015_12_scaffold_129_19
Akkermansia muciniphila CAG:154, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

16557..17690
DNA (1134bp) protein (378aa)
hypothetical protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI00017463D6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDB55031.1}; TaxID=1263034 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" so
04302015_12_scaffold_129_20
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(17802..20492)
DNA (2691bp) protein (897aa)
hypothetical protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001746909 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGA28656.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera aci
04302015_12_scaffold_129_21
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

20571..21548
DNA (978bp) protein (326aa)
hypothetical protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001744451
Acyltransferase family protein {ECO:0000313|EMBL:EDY16170.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
acyltransferase family protein
04302015_12_scaffold_129_22
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21963..22259
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae 90B8 RepID=R0BFZ9_9CLOT
type II restriction endonuclease, putative
Tax=RBG_16_Gamma2_65_34_curated
04302015_12_scaffold_129_23
Paracoccus sp. 5503, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22374..22997
DNA (624bp) protein (208aa)
Uncharacterized protein n=2 Tax=Brevibacillus RepID=J2I979_9BACL
Restriction endonuclease {ECO:0000313|EMBL:KGJ22092.1}; TaxID=1525717 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 55
type II restriction endonuclease, putative
04302015_12_scaffold_129_24
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(22989..24110)
DNA (1122bp) protein (374aa)
Type II DNA modification methyltransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6B6_9GAMM rbh
N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
Tax=CG_Anaero_02
04302015_12_scaffold_129_25
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(24137..24649)
DNA (513bp) protein (171aa)
Type II DNA modification methyltransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6B6_9GAMM
type II DNA modification methyltransferase
Tax=CG_Anaero_02
04302015_12_scaffold_129_26
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

24972..28478
DNA (3507bp) protein (1169aa)
probable S-layer related protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI000174448C rbh
Uncharacterized protein {ECO:0000313|EMBL:EDY21808.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
04302015_12_scaffold_129_27
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

28576..29883
DNA (1308bp) protein (436aa)
hypothetical protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI000174617B rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA27114.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera aci
04302015_12_scaffold_129_28
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

29922..31352
DNA (1431bp) protein (477aa)
Peptidase domain protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CWM9_9BACT
Peptidase domain protein {ECO:0000313|EMBL:EDY21821.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
pre-peptidase
04302015_12_scaffold_129_29
Desulfovibrio sp. U5L, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31497..32132
DNA (636bp) protein (212aa)
Fructose-2,6-bisphosphatase n=1 Tax=Desulfovibrio sp. U5L RepID=I2PZK8_9DELT
Fructose-2,6-bisphosphatase {ECO:0000313|EMBL:EIG52964.1}; TaxID=596152 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulf
phosphoglycerate mutase family protein
04302015_12_scaffold_129_30
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

32200..33582
DNA (1383bp) protein (461aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI000367D1F5 rbh
Uncharacterized protein {ECO:0000313|EMBL:EDL59406.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
hypothetical protein
Displaying items 1-30 of 31 in total

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