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04302015_21_scaffold_24

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Displaying items 1-30 of 71 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_21_scaffold_24_1

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1..1191
DNA (1191bp) protein (397aa)
Putative RND efflux system, outer membrane lipoprotein, NodT n=1 Tax=mine drainage metagenome RepID=E6PLR3_9ZZZZ rbh
Putative RND efflux system, outer membrane lipoprotein, NodT {ECO:0000313|EMBL:CBH95864.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
NodT family RND efflux system outer membrane lipoprotein rbh
04302015_21_scaffold_24_2
RBG_16_Gallionellales_56_9_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1284..1709
DNA (426bp) protein (142aa)
Abortive infection protein n=1 Tax=Thioalkalivibrio thiocyanoxidans ARh 4 RepID=G4DM88_9GAMM
abortive infection protein
Tax=RBG_16_Gallionellales_56_9_curated
04302015_21_scaffold_24_3
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1913..2770
DNA (858bp) protein (286aa)
Bifunctional deaminase-reductase domain protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BZQ2_NITHN
bifunctional deaminase-reductase domain-containing protein
Bifunctional deaminase-reductase domain protein {ECO:0000313|EMBL:ADE14347.1}; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophilus (strain Nc4).;"
04302015_21_scaffold_24_4
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2895..3719)
DNA (825bp) protein (275aa)
hypothetical protein n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI000363D1DD
Nucleoside triphosphate hydrolase {ECO:0000313|EMBL:KGM56640.1}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;"
MazG family protein; K02499 tetrapyrrole methylase family protein / MazG family protein
04302015_21_scaffold_24_5
Candidatus Kuenenia stuttgartiensis, Candidatus Kuenenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(3748..5223)
DNA (1476bp) protein (492aa)
Uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q0J1_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:CAJ73517.1}; TaxID=174633 species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Kuenenia.;" source="Candidatus Kuenenia stuttgartiensis.;"
RimK domain-containing protein rbh
04302015_21_scaffold_24_6
RBG_16_Gammaproteobacteria_57_12_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5249..6358)
DNA (1110bp) protein (370aa)
Uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q0J2_9BACT rbh
GCN5-like N-acetyltransferase rbh
Tax=RBG_16_Gammaproteobacteria_57_12_curated
04302015_21_scaffold_24_7
Thioflavicoccus mobilis, Thioflavicoccus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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6585..7106
DNA (522bp) protein (174aa)
ADP-ribose pyrophosphatase n=1 Tax=Thioflavicoccus mobilis 8321 RepID=L0H1A3_9GAMM
ADP-ribose pyrophosphatase
ADP-ribose pyrophosphatase {ECO:0000313|EMBL:AGA91976.1}; TaxID=765912 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thioflavicoccus.;" source="Thioflavicoccus mobilis 8321.;"
04302015_21_scaffold_24_8
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7137..8459)
DNA (1323bp) protein (441aa)
hypothetical protein n=1 Tax=Chitiniphilus shinanonensis RepID=UPI000364F46B
response regulator receiver modulated diguanylate cyclase
Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
04302015_21_scaffold_24_9
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8739..9161)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Thermanaerovibrio acidaminovorans (strain ATCC 49978 / DSM 6589 / Su883) RepID=D1B5T3_THEAS
hypothetical protein; K06940
Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
04302015_21_scaffold_24_10
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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9529..10008
DNA (480bp) protein (160aa)
transcriptional regulator n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI00036A332F
BadM/Rrf2 family transcriptional regulator; K13643 Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
Transcriptional regulator, BadM/Rrf2 family {ECO:0000313|EMBL:ACL72570.1}; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
04302015_21_scaffold_24_11
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10069..11517
DNA (1449bp) protein (483aa)
FeS assembly protein SufB n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BWY7_NITHN rbh
FeS assembly protein SufB; K09014 Fe-S cluster assembly protein SufB rbh
Tax=RBG_16_Gamma2_60_9_curated
04302015_21_scaffold_24_12
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11597..12358
DNA (762bp) protein (254aa)
FeS assembly ATPase SufC n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BWY8_NITHN rbh
FeS assembly ATPase SufC; K09013 Fe-S cluster assembly ATP-binding protein rbh
FeS assembly ATPase SufC {ECO:0000313|EMBL:ADE13869.1}; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophilus (strain Nc4).;"
04302015_21_scaffold_24_13
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12364..13707
DNA (1344bp) protein (448aa)
Iron-regulated ABC transporter permease protein SufD n=2 Tax=Nitrosococcus oceani RepID=Q3J8A5_NITOC rbh
FeS assembly protein SufD; K09015 Fe-S cluster assembly protein SufD rbh
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
04302015_21_scaffold_24_14
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13704..14978
DNA (1275bp) protein (425aa)
sufS; cysteine desulfurase (SufS) (EC:2.8.1.7); K11717 cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] rbh
Cysteine desulfurase id=2101213 bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria rbh
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
04302015_21_scaffold_24_15
Burkholderiaceae bacterium 16, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14975..15427
DNA (453bp) protein (151aa)
nitrogen fixation protein NifU n=1 Tax=Burkholderia sp. WSM4176 RepID=UPI00036E64EF
Nitrogen fixation protein NifU {ECO:0000313|EMBL:KJK10231.1}; TaxID=1619952 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae.;" source="Burkholderiaceae bacterium 16.;"
sufU; iron sulfur cluster assembly protein SufU; K04488 nitrogen fixation protein NifU and related proteins
04302015_21_scaffold_24_16

Not on your lists

15498..15842
DNA (345bp) protein (115aa)
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI00035E57EA
Uncharacterized protein {ECO:0000313|EMBL:KKN44113.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
sufT; iron sulfur cluster assembly protein SufT
04302015_21_scaffold_24_17
Burkholderia terrae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15904..16224
DNA (321bp) protein (107aa)
Ferredoxin n=1 Tax=Burkholderia terrae BS001 RepID=I5CF06_9BURK
Ferredoxin {ECO:0000313|EMBL:EIM94474.1}; TaxID=1171375 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia terrae BS001.;"
Rieske (2Fe-2S) domain-containing protein; K05710 dioxygenase ferredoxin subunit
04302015_21_scaffold_24_18
RBG_13_Planctomycetes_63_9_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

16324..17082
DNA (759bp) protein (253aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI000378FB81 rbh
serine/threonine protein kinase domain-containing protein rbh
Tax=RBG_13_Planctomycetes_63_9_curated
04302015_21_scaffold_24_19
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17147..17977
DNA (831bp) protein (277aa)
Protein serine/threonine phosphatase n=1 Tax=Rhodopirellula sallentina SM41 RepID=M5TRU6_9PLAN
protein serine/threonine phosphatase
Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
04302015_21_scaffold_24_20
RBG_16_Gammaproteobacteria_57_12_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18128..18589)
DNA (462bp) protein (154aa)
Putative regulator of sigma D n=1 Tax=gamma proteobacterium IMCC2047 RepID=F3KEJ9_9GAMM
Regulator of sigma D
Tax=RBG_16_Gammaproteobacteria_57_12_curated
04302015_21_scaffold_24_21
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19031..20203)
DNA (1173bp) protein (391aa)
Histidinol dehydrogenase n=2 Tax=sulfur-oxidizing symbionts RepID=G2DDU8_9GAMM rbh
Sodium/hydrogen antiporter {ECO:0000313|EMBL:BAP55728.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
sodium/hydrogen antiporter rbh
04302015_21_scaffold_24_22
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20646..21119)
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-133-G06 RepID=UPI00036F1F91
protein tyrosine phosphatase
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
04302015_21_scaffold_24_23
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21192..22862)
DNA (1671bp) protein (557aa)
Sodium/hydrogen exchanger n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CR82_TRURR rbh
sodium/hydrogen exchanger rbh
Tax=RBG_16_Gamma2_60_9_curated
04302015_21_scaffold_24_24
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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23099..24559
DNA (1461bp) protein (487aa)
phospholipase D n=1 Tax=Schlesneria paludicola RepID=UPI00029A544B rbh
phospholipase family protein rbh
Phospholipase family protein {ECO:0000313|EMBL:AGC41878.1}; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8).;"
04302015_21_scaffold_24_25
RBG_16_Gamma2_64_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24829..25110
DNA (282bp) protein (94aa)
hypothetical protein n=1 Tax=Legionella tunisiensis RepID=UPI0003109C2B
hypothetical protein
Tax=RBG_16_Gamma2_64_10_curated
04302015_21_scaffold_24_26
RBG_16_Gamma2_64_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25234..26082
DNA (849bp) protein (283aa)
hypothetical protein n=1 Tax=Methylohalobius crimeensis RepID=UPI0003B6A209 rbh
hypothetical protein; K09930 hypothetical protein rbh
Tax=RBG_16_Gamma2_64_10_curated
04302015_21_scaffold_24_27
RBG_16_Gamma2_64_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26079..26864
DNA (786bp) protein (262aa)
hypothetical protein n=1 Tax=Legionella tunisiensis RepID=UPI000318DD4E
hypothetical protein
Tax=RBG_16_Gamma2_64_10_curated
04302015_21_scaffold_24_28
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26955..29024)
DNA (2070bp) protein (690aa)
Putative membrane protein n=1 Tax=Rickettsiella grylli RepID=A8PN24_9COXI rbh
lysine-specific permease rbh
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
04302015_21_scaffold_24_29
unknown

Not on your lists

30053..30739
DNA (687bp) protein (229aa)

This feature has no annotations

04302015_21_scaffold_24_30
Cycloclasticus zancles, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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30822..32117
DNA (1296bp) protein (432aa)
Glutamate dehydrogenase n=1 Tax=Cycloclasticus zancles 7-ME RepID=S5T424_9GAMM rbh
Glutamate dehydrogenase/leucine dehydrogenase rbh
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=1198232 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Cycloclasticus.;" source="Cycloclasticus zancles 7-ME.;"
Displaying items 1-30 of 71 in total

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