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04302015_21_scaffold_145

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_21_scaffold_145_1
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(494..1681)
DNA (1188bp) protein (396aa)
coproporphyrinogen dehydrogenase; K02495 oxygen-independent coproporphyrinogen III oxidase [EC:1.3.99.22] rbh
coproporphyrinogen III oxidase n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI00036EA3C8 rbh
Tax=BJP_IG2102_Gammaproteobacteria_62_140
04302015_21_scaffold_145_2
RBG_19FT_COMBO_Gammaproteobacteria_61_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1751..2755)
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AI23_9PROT
hypothetical protein
Tax=RBG_19FT_COMBO_Gammaproteobacteria_61_10_curated
04302015_21_scaffold_145_3
RBG_16_Gamma2_64_11_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(2766..3386)
DNA (621bp) protein (207aa)
Non-canonical purine NTP pyrophosphatase n=1 Tax=Thiorhodococcus drewsii AZ1 RepID=G2E1E8_9GAMM
RdgB/HAM1 family non-canonical purine NTP pyrophosphatase
Tax=RBG_16_Gamma2_64_11_curated
04302015_21_scaffold_145_4
Methylophaga lonarensis, Methylophaga, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3406..4125)
DNA (720bp) protein (240aa)
Ribonuclease PH {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104182}; Short=RNase PH {ECO:0000256|HAMAP-Rule:MF_00564};; EC=2.7.7.56 {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104188};; tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_00564}; TaxID=1286106 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Methylophaga.;" source="Methylophaga lonarensis MPL.;"
rph; ribonuclease PH (EC:2.7.7.56); K00989 ribonuclease PH [EC:2.7.7.56] rbh
Ribonuclease PH n=1 Tax=Methylophaga lonarensis MPL RepID=M7NXL3_9GAMM rbh
04302015_21_scaffold_145_5
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4201..5058)
DNA (858bp) protein (286aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI00037BD577
protein serine/threonine phosphatase
Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
04302015_21_scaffold_145_6
RBG_16_Gammaproteobacteria_57_12_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5107..5973
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GPB1_THISH
hypothetical protein
Tax=RBG_16_Gammaproteobacteria_57_12_curated
04302015_21_scaffold_145_7
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6070..6711
DNA (642bp) protein (214aa)
Guanylate kinase (EC:2.7.4.8); K00942 guanylate kinase [EC:2.7.4.8]
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_00328}; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
guanylate kinase n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI00036FD9C8
04302015_21_scaffold_145_8
Spiribacter sp. UAH-SP71, Spiribacter, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6775..7176
DNA (402bp) protein (134aa)
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=1335757 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Spiribacter.;" source="Spiriba
DNA-directed RNA polymerase subunit omega n=1 Tax=Spiribacter sp. UAH-SP71 RepID=U5T236_9GAMM
hypothetical protein
04302015_21_scaffold_145_9
RBG_16_Gamma2_64_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7336..9504
DNA (2169bp) protein (723aa)
GTP diphosphokinase (EC:2.7.6.5); K00951 GTP pyrophosphokinase [EC:2.7.6.5] rbh
bifunctional (p)ppGpp synthetase II/ guanosine-3'''',5''''-bis pyrophosphate 3''''-pyrophosphohydrolase n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI000360D46C rbh
Tax=RBG_16_Gamma2_64_10_curated
04302015_21_scaffold_145_10
Solemya velum gill symbiont, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9576..9962
DNA (387bp) protein (129aa)
Endoribonuclease L-PSP n=1 Tax=Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) RepID=I3YG52_THIV6
Endoribonuclease L-PSP {ECO:0000313|EMBL:KHF26492.1}; TaxID=2340 species="Bacteria; Proteobacteria; Gammaproteobacteria; sulfur-oxidizing symbionts.;" source="Solemya velum gill symbiont.;"
endoribonuclease L-PSP
04302015_21_scaffold_145_11
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9984..12116
DNA (2133bp) protein (711aa)
ATP-dependent DNA helicase RecG; K03655 ATP-dependent DNA helicase RecG [EC:3.6.4.12] rbh
ATP-dependent DNA helicase RecG n=1 Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G6B0_9GAMM rbh
Tax=BJP_IG2102_Gammaproteobacteria_62_140
04302015_21_scaffold_145_12
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12117..12944
DNA (828bp) protein (276aa)
Probable chorismate pyruvate-lyase n=1 Tax=endosymbiont of Tevnia jerichonana (vent Tica) RepID=G2FEN3_9GAMM
chorismate--pyruvate lyase
Tax=BJP_IG2102_Gammaproteobacteria_62_140
04302015_21_scaffold_145_13
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12922..13818
DNA (897bp) protein (299aa)
4-hydroxybenzoate polyprenyl transferase; K03179 4-hydroxybenzoate octaprenyltransferase [EC:2.5.1.-] rbh
4-hydroxybenzoate octaprenyltransferase {ECO:0000256|SAAS:SAAS00210629}; EC=2.5.1.- {ECO:0000256|SAAS:SAAS00272707};; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
4-hydroxybenzoate polyprenyltransferase n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI00036F17CB rbh
04302015_21_scaffold_145_14
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13835..14440)
DNA (606bp) protein (202aa)
Outer-membrane lipoprotein LolB n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GLA4_THISH
Outer-membrane lipoprotein LolB {ECO:0000256|HAMAP-Rule:MF_00233, ECO:0000256|SAAS:SAAS00002103}; TaxID=1400863 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;" source="Candidatus Competibacter denitrificans Run_A_D11.;"
outer membrane lipoprotein LolB; K02494 outer membrane lipoprotein LolB
04302015_21_scaffold_145_15
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14437..16221)
DNA (1785bp) protein (595aa)
TPR repeat protein n=2 Tax=Nitrosococcus oceani RepID=Q3JDR2_NITOC rbh
TPR repeat-containing protein rbh
Tax=BJP_IG2102_Gammaproteobacteria_62_140
04302015_21_scaffold_145_16
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16351..17613
DNA (1263bp) protein (421aa)
Glutamyl-tRNA reductase n=1 Tax=endosymbiont of Tevnia jerichonana (vent Tica) RepID=G2FH08_9GAMM rbh
glutamyl-tRNA reductase rbh
Tax=BJP_IG2102_Gammaproteobacteria_62_140
04302015_21_scaffold_145_17
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17618..18700
DNA (1083bp) protein (361aa)
Peptide chain release factor 1 n=1 Tax=Methylophaga frappieri (strain ATCC BAA-2434 / DSM 25690 / JAM7) RepID=I1YJY9_METFJ rbh
Peptide chain release factor 1; K02835 peptide chain release factor 1 rbh
Tax=BJP_IG2102_Gammaproteobacteria_62_140
04302015_21_scaffold_145_18
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18705..19646
DNA (942bp) protein (314aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.
protein-(glutamine-N5) methyltransferase, release factor-specific; K02493 release factor glutamine methyltransferase [EC:2.1.1.-]
hypothetical protein n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00036C27FE
04302015_21_scaffold_145_19
Nitrococcus mobilis, Nitrococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19683..20486
DNA (804bp) protein (268aa)
Adenylyltransferase n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BLY0_9GAMM
Adenylyltransferase {ECO:0000313|EMBL:EAR23318.1}; TaxID=314278 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Nitrococcus.;" source="Nitrococcus mobilis Nb-231.;"
molybdopterin biosynthesis protein MoeB
04302015_21_scaffold_145_20
Nitrosococcus watsonii, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20468..20881
DNA (414bp) protein (138aa)
Mov34/MPN/PAD-1 family protein n=1 Tax=Nitrosococcus watsoni (strain C-113) RepID=D8KAT1_NITWC
Mov34/MPN/PAD-1 family protein
Mov34/MPN/PAD-1 family protein {ECO:0000313|EMBL:ADJ29508.1}; TaxID=105559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus watsoni (strain C-113).;"
04302015_21_scaffold_145_21
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21040..21582)
DNA (543bp) protein (181aa)
glutamyl-tRNA(Gln) amidotransferase subunit B; K02434 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000255|HAMAP-Rule:MF_00121}; Short=Asp/Glu-ADT subunit B {ECO:0000255|HAMAP-Rule:MF_00121};; EC=6.3.5.- {ECO:0000255|HAMAP-Rule:MF_00121};; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
glutamyl-tRNA amidotransferase subunit B n=1 Tax=Arhodomonas aquaeolei RepID=UPI00035E2C36
Displaying 21 items

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