ggKbase home page

04302015_21_scaffold_262

Search features with annotation key words

Displaying 21 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_21_scaffold_262_1
Parcubacteria bacterium GW2011_GWA1_54_9, Parcubacteria, Bacteria

Not on your lists

331..570
DNA (240bp) protein (80aa)
Glutaredoxin-like protein, YruB-family {ECO:0000313|EMBL:KKW39651.1}; TaxID=1618802 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_54_9.;"
glutaredoxin-like protein, YruB-family id=5226974 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
glutaredoxin-like protein
04302015_21_scaffold_262_trna_1
unknown

Not on your lists

642..713
DNA (72bp)
transferRNA
04302015_21_scaffold_262_2
R_OD1_Kaiserbacteria_54_22, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

738..1019
DNA (282bp) protein (94aa)
Tax=RIFCSPHIGHO2_02_FULL_OD1_Kaiserbacteria_54_22_curated
04302015_21_scaffold_262_3
R_OD1_Kaiserbacteria_51_13, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

1465..1764
DNA (300bp) protein (100aa)
Resolvase helix-turn-helix domain protein n=1 Tax=Micromonospora sp. L5 RepID=D3CGD6_9ACTO id=133597 bin=ACD81 species=Micromonospora sp. L5 genus=Micromonospora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
Tax=RIFCSPLOWO2_02_FULL_OD1_Kaiserbacteria_51_13_curated
04302015_21_scaffold_262_trna_2
unknown

Not on your lists

1787..1860
DNA (74bp)
transferRNA
04302015_21_scaffold_262_4
R_OD1_Kaiserbacteria_52_12b, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

1927..2958
DNA (1032bp) protein (344aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA040-L21 RepID=UPI00036C800D
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_OD1_Kaiserbacteria_52_12b_curated
04302015_21_scaffold_262_5
R_OD1_Kaiserbacteria_55_17, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

comp(2955..3464)
DNA (510bp) protein (170aa)
heat shock protein Hsp20; K13993 HSP20 family protein id=5803649 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
heat shock protein Hsp20; K13993 HSP20 family protein
Tax=RIFCSPHIGHO2_02_FULL_OD1_Kaiserbacteria_55_17_curated
04302015_21_scaffold_262_6
R_OD1_Kaiserbacteria_55_17, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

comp(3474..4178)
DNA (705bp) protein (235aa)
hypothetical protein id=5803648 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
Tax=RIFCSPHIGHO2_02_FULL_OD1_Kaiserbacteria_55_17_curated
04302015_21_scaffold_262_7
RHI_OD1_Adlerbacteria_53_18, Adlerbacteria, Parcubacteria, Bacteria

Not on your lists


comp(4188..6416)
DNA (2229bp) protein (743aa)
valyl-tRNA synthetase; K01873 valyl-tRNA synthetase [EC:6.1.1.9]
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-J21 RepID=UPI000361784C rbh
Tax=RIFCSPHIGHO2_12_FULL_OD1_Adlerbacteria_53_18_curated
04302015_21_scaffold_262_8
Parcubacteria bacterium GW2011_GWA1_54_9, Parcubacteria, Bacteria

Not on your lists


comp(6444..7616)
DNA (1173bp) protein (391aa)
hypothetical protein; K01409 O-sialoglycoprotein endopeptidase [EC:3.4.24.57] id=5803482 bin=OD1_GWC2_34_28 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome rbh
DNA-binding/iron metalloprotein/AP endonuclease (EC:3.4.24.57); K01409 O-sialoglycoprotein endopeptidase [EC:3.4.24.57]
(SSU ribosomal protein S18P)-alanine acetyltransferase {ECO:0000313|EMBL:KKW39888.1}; TaxID=1618802 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_54_9.;"
04302015_21_scaffold_262_9
R_OD1_Kaiserbacteria_55_17, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

7714..8277
DNA (564bp) protein (188aa)
similar to Oligoribonuclease, mitochondrial precursor (Small fragment nuclease) (RNA exonuclease 2 homolog); K13288 oligoribonuclease [EC:3.1.-.-]
Exonuclease domain containing protein n=1 Tax=Haemonchus contortus RepID=U6PES0_HAECO
Tax=RIFCSPHIGHO2_02_FULL_OD1_Kaiserbacteria_55_17_curated
04302015_21_scaffold_262_10
R_OD1_Kaiserbacteria_55_17, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

comp(8261..9115)
DNA (855bp) protein (285aa)
Phosphoesterase, DHHA1 id=3079080 bin=GWC1_OD1_38_17 species=Microscilla marina genus=Microscilla taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
Phosphoesterase, DHHA1
Tax=RIFCSPHIGHO2_02_FULL_OD1_Kaiserbacteria_55_17_curated
04302015_21_scaffold_262_11
R_OD1_Kaiserbacteria_54_22, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

comp(9126..9989)
DNA (864bp) protein (288aa)
hypothetical protein; K06969 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1ZF41_9BACT
Tax=RIFCSPHIGHO2_02_FULL_OD1_Kaiserbacteria_54_22_curated
04302015_21_scaffold_262_12
GWA2_OD1_Kaiserbacteria_50_9_curated, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

comp(9986..10756)
DNA (771bp) protein (257aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA040-L21 RepID=UPI00036958D7
rRNA methylase
Tax=GWA2_OD1_Kaiserbacteria_50_9_curated
04302015_21_scaffold_262_trna_5
unknown

Not on your lists

comp(10802..10880)
DNA (79bp)
transferRNA
04302015_21_scaffold_262_13
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

10940..11377
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Patulibacter medicamentivorans RepID=H0E0U6_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EHN12710.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
hypothetical protein
04302015_21_scaffold_262_14
R_OD1_Kaiserbacteria_55_17, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

comp(11460..12149)
DNA (690bp) protein (230aa)
hypothetical protein id=5227089 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
Tax=RIFCSPHIGHO2_02_FULL_OD1_Kaiserbacteria_55_17_curated
04302015_21_scaffold_262_15
unknown

Not on your lists

comp(12253..12819)
DNA (567bp) protein (189aa)

This feature has no annotations

04302015_21_scaffold_262_16
unknown

Not on your lists

13022..13708
DNA (687bp) protein (229aa)

This feature has no annotations

04302015_21_scaffold_262_trna_4
unknown

Not on your lists

comp(13987..14058)
DNA (72bp)
transferRNA
04302015_21_scaffold_262_trna_3
unknown

Not on your lists

14446..14533
DNA (88bp)
transferRNA
Displaying 21 items

View Taxonomy