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04302015_21_scaffold_857

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_21_scaffold_857_1

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2..589
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A4A2Z2_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:KKN85825.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
cysteine desulfurase
04302015_21_scaffold_857_2
Blastopirellula marina, Blastopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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790..1215
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A4A2Z1_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:EAQ76870.1}; TaxID=314230 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Blastopirellula.;" source="Blastopirellula marina DSM 3645.;"
hypothetical protein; K06940
04302015_21_scaffold_857_3

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1490..1906
DNA (417bp) protein (139aa)
Histone family protein DNA-binding protein n=1 Tax=Planctomyces limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290) RepID=D5SUQ3_PLAL2
Marine sediment metagenome DNA, contig: S01H1_L02847 {ECO:0000313|EMBL:GAF81822.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
histone family protein DNA-binding protein; K05788 integration host factor subunit beta
04302015_21_scaffold_857_4

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2115..2333
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A4A2Y9_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:KKL07588.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
04302015_21_scaffold_857_5
Rhodopirellula europaea, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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2340..3377
DNA (1038bp) protein (346aa)
Dihydroorotate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00224}; Short=DHOD {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHODase {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHOdehase {ECO:0000256|HAMAP-Rule:MF_00224};; EC=1.3.-.- {ECO:0000256|HAMAP-Rule:MF_00224};; TaxID=1263867 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula europaea 6C.;"
pyrD; dihydroorotate dehydrogenase (EC:1.3.3.1); K00226 dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1] rbh
Dihydroorotate dehydrogenase n=1 Tax=Rhodopirellula europaea 6C RepID=M2AT27_9PLAN rbh
04302015_21_scaffold_857_6
RBG_13_Planctomycetes_63_9_curated, Planctomycetia, Planctomycetes, Bacteria

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3377..4342
DNA (966bp) protein (322aa)
tryptophanyl-tRNA synthetase (EC:6.1.1.2); K01867 tryptophanyl-tRNA synthetase [EC:6.1.1.2] rbh
Tryptophan--tRNA ligase n=1 Tax=Rhodopirellula europaea SH398 RepID=M5SL73_9PLAN rbh
Tax=RBG_13_Planctomycetes_63_9_curated
04302015_21_scaffold_857_7
RBG_16_Planctomycetes_64_10_curated, Planctomycetia, Planctomycetes, Bacteria

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4339..4746
DNA (408bp) protein (136aa)
holo-acyl-carrier-protein synthase; K00997 holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
Holo-[acyl-carrier-protein] synthase n=1 Tax=Blastopirellula marina DSM 3645 RepID=A4A2Y6_9PLAN
Tax=RBG_16_Planctomycetes_64_10_curated
04302015_21_scaffold_857_8
unknown

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comp(4783..5274)
DNA (492bp) protein (164aa)

This feature has no annotations

04302015_21_scaffold_857_9
unknown

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5364..5852
DNA (489bp) protein (163aa)

This feature has no annotations

04302015_21_scaffold_857_10
Geobacter sp. M18, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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5889..7310
DNA (1422bp) protein (474aa)
Putative uncharacterized protein n=1 Tax=Geobacter sp. (strain M18) RepID=E8WPJ1_GEOS8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADW12765.1}; TaxID=443143 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. (strain M18).;"
Displaying 10 items

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