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GOSHIP-P18_170_1_13_153S_1017m_2_1002

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GOSHIP-P18_170_1_13_153S_1017m_2_1002_1
RIFCSPLOWO2_12_FULL_Rhodospirillales_58_28_curated, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(54..845)
-----------------
DNA (792bp)
protein (264aa)
Protein of unknown function
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI00036BBF51
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_58_28_curated
GOSHIP-P18_170_1_13_153S_1017m_2_1002_2
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(887..1834)
-----------------
DNA (948bp)
protein (316aa)
fcl; GDP-L-fucose synthase (EC:1.1.1.271)
GDP-L-fucose synthase n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P8E5_AZOS1
GDP-L-fucose synthase {ECO:0000256|HAMAP-Rule:MF_00956}; EC=1.1.1.271 {ECO:0000256|HAMAP-Rule:MF_00956};; GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase {ECO:0000256|HAMAP-Rule:MF_00956}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
GOSHIP-P18_170_1_13_153S_1017m_2_1002_3
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2099..3040)
-----------------
DNA (942bp)
protein (314aa)
lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase
UDP-3-O-acyl-N-acetylglucosamine deacetylase n=1 Tax=alpha proteobacterium BAL199 RepID=A8TR51_9PROT
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase {ECO:0000256|HAMAP-Rule:MF_00388, ECO:0000256|SAAS:SAAS00041388}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_00388, ECO:0000256|SAAS:SAAS00041386};; UDP-3-O-acyl-GlcNAc deacetylase {ECO:0000256|HAMAP-Rule:MF_00388}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
GOSHIP-P18_170_1_13_153S_1017m_2_1002_4
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3214..4509)
-----------------
DNA (1296bp)
protein (432aa)
ftsA; cell division protein FtsA
Cell division protein ftsA n=1 Tax=Oceanibaculum indicum P24 RepID=K2K002_9PROT
Cell division protein ftsA {ECO:0000256|PIRNR:PIRNR003101}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
GOSHIP-P18_170_1_13_153S_1017m_2_1002_5
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4502..5368)
-----------------
DNA (867bp)
protein (289aa)
cell division protein
Cell division protein FtsQ n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AFN1_AZOBR
Cell division protein FtsQ {ECO:0000256|HAMAP-Rule:MF_00911, ECO:0000256|SAAS:SAAS00006985}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
GOSHIP-P18_170_1_13_153S_1017m_2_1002_6
RIFCSPLOWO2_01_FULL_Rhodospirillales_65_14_curated, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5467..6381)
-----------------
DNA (915bp)
protein (305aa)
ddl; D-alanine--D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase n=2 Tax=Magnetospirillum gryphiswaldense RepID=V6F2G2_9PROT
Tax=RIFCSPLOWO2_01_FULL_Rhodospirillales_65_14_curated
GOSHIP-P18_170_1_13_153S_1017m_2_1002_7
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6378..7319)
-----------------
DNA (942bp)
protein (314aa)
murB; UDP-N-acetylenolpyruvoylglucosamine reductase
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IC39_XANP2
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-acetylmuramate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00037}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
GOSHIP-P18_170_1_13_153S_1017m_2_1002_8
Caenispirillum salinarum, Caenispirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7316..8752)
-----------------
DNA (1437bp)
protein (479aa)
murC; UDP-N-acetyl-muramate:alanine ligase, L-alanine adding enzyme (EC:6.3.2.8)
UDP-N-acetylmuramate--L-alanine ligase n=1 Tax=Caenispirillum salinarum AK4 RepID=K9HHS1_9PROT
UDP-N-acetylmuramate--L-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344}; EC=6.3.2.8 {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344};; UDP-N-acetylmuramoyl-L-alanine synthetase {ECO:0000256|HAMAP-Rule:MF_00046}; TaxID=1238182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Caenispirillum.;" source="Caenispirillum salinarum AK4.;"
GOSHIP-P18_170_1_13_153S_1017m_2_1002_9
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8749..9876)
-----------------
DNA (1128bp)
protein (376aa)
murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase (EC:2.4.1.227)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=MURG_MAGSA
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082867}; EC=2.4.1.227 {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082938};; Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase {ECO:0000256|HAMAP-Rule:MF_00033}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
GOSHIP-P18_170_1_13_153S_1017m_2_1002_10
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9891..11003)
-----------------
DNA (1113bp)
protein (371aa)
cell division protein FtsW
Essential cell division protein (Stabilizes FtsZ ring) n=1 Tax=Phaeospirillum molischianum DSM 120 RepID=H8FMQ6_PHAMO
Cell division protein FtsW {ECO:0000313|EMBL:KJB95082.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
GOSHIP-P18_170_1_13_153S_1017m_2_1002_11
RIFOXYD12_FULL_Rhodospirillales_60_8_curated, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11000..12433)
-----------------
DNA (1434bp)
protein (478aa)
murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B45C32
Tax=RIFOXYD12_FULL_Rhodospirillales_60_8_curated
GOSHIP-P18_170_1_13_153S_1017m_2_1002_12
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12440..13528)
-----------------
DNA (1089bp)
protein (363aa)
mraY; phospho-N-acetylmuramoyl-pentapeptide transferase (EC:2.7.8.13)
Phospho-N-acetylmuramoyl-pentapeptide transferase n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F2M7_9PROT
Phospho-N-acetylmuramoyl-pentapeptide-transferase {ECO:0000256|HAMAP-Rule:MF_00038}; EC=2.7.8.13 {ECO:0000256|HAMAP-Rule:MF_00038, ECO:0000313|EMBL:CDK99709.1};; UDP-MurNAc-pentapeptide phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00038}; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
GOSHIP-P18_170_1_13_153S_1017m_2_1002_13
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13557..13745)
-----------------
DNA (189bp)
protein (63aa)
murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase subfamily
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TVR7_TISMK
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;"
Displaying 13 items

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