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GOSHIP-P18_170_1_13_153S_1017m_2_2128

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GOSHIP-P18_170_1_13_153S_1017m_2_2128_1
unknown

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comp(2..106)
-----------------
DNA (105bp)
protein (35aa)

This feature has no annotations

GOSHIP-P18_170_1_13_153S_1017m_2_2128_2
RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(147..923)
-----------------
DNA (777bp)
protein (259aa)
sdhB; succinate dehydrogenase, Fe-S subunit
Succinate dehydrogenase iron-sulfur subunit n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5XV08_9PROT
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
GOSHIP-P18_170_1_13_153S_1017m_2_2128_3
Cycloclasticus sp. P1, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(966..2756)
-----------------
DNA (1791bp)
protein (597aa)
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit
Succinate dehydrogenase subunit A n=3 Tax=Cycloclasticus RepID=K0C5Y2_CYCSP
Succinate dehydrogenase flavoprotein subunit {ECO:0000256|RuleBase:RU362051}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU362051};; TaxID=385025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Cycloclasticus.;" source="Cycloclasticus sp. (strain P1).;"
GOSHIP-P18_170_1_13_153S_1017m_2_2128_4
Alkalilimnicola ehrlichii, Alkalilimnicola, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2760..3134)
-----------------
DNA (375bp)
protein (125aa)
succinate dehydrogenase subunit D (EC:1.3.5.1)
Succinate dehydrogenase subunit D n=1 Tax=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) RepID=Q0A905_ALKEH
Succinate dehydrogenase subunit D {ECO:0000313|EMBL:ABI56682.1}; EC=1.3.5.1 {ECO:0000313|EMBL:ABI56682.1};; TaxID=187272 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Alkalilimnicola.;" source="Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1).;"
GOSHIP-P18_170_1_13_153S_1017m_2_2128_5
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3134..3568)
-----------------
DNA (435bp)
protein (145aa)
succinate dehydrogenase subunit C (EC:1.3.5.1)
succinate dehydrogenase n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B2F038
Succinate dehydrogenase, cytochrome b subunit {ECO:0000313|EMBL:EDP62793.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
GOSHIP-P18_170_1_13_153S_1017m_2_2128_6
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3717..4574
-----------------
DNA (858bp)
protein (286aa)
pdxY; Pyridoxamine kinase (PM kinase)
hypothetical protein n=1 Tax=Methylopila sp. M107 RepID=UPI000374D79F
Pyridoxal kinase {ECO:0000256|SAAS:SAAS00088591}; EC=2.7.1.35 {ECO:0000256|SAAS:SAAS00088591};; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
GOSHIP-P18_170_1_13_153S_1017m_2_2128_7
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4565..5578)
-----------------
DNA (1014bp)
protein (338aa)
asd; Aspartate-semialdehyde dehydrogenase (ASA dehydrogenase) (ASADH) (EC:1.2.1.11)
Aspartate-semialdehyde dehydrogenase n=1 Tax=Phaeospirillum fulvum MGU-K5 RepID=S9SA76_PHAFV
Aspartate-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121, ECO:0000313|EMBL:KJB95946.1}; Short=ASA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121};; Short=ASADH {ECO:0000256|HAMAP-Rule:MF_02121};; EC=1.2.1.11 {ECO:0000256|HAMAP-Rule:MF_02121, ECO:0000313|EMBL:KJB95946.1};; Aspartate-beta-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
GOSHIP-P18_170_1_13_153S_1017m_2_2128_8
Elstera litoralis, Elstera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5691..6803)
-----------------
DNA (1113bp)
protein (371aa)
leuB; 3-isopropylmalate dehydrogenase
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI00036D67C5
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|HAMAP-Rule:MF_01033}; Beta-IPM dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033}; TaxID=552518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Elstera.;" source="Elstera litoralis.;"
GOSHIP-P18_170_1_13_153S_1017m_2_2128_9
Thalassospira sp. HJ, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6829..7434)
-----------------
DNA (606bp)
protein (202aa)
leuD; 3-isopropylmalate dehydratase small subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase small subunit n=1 Tax=Thalassospira profundimaris WP0211 RepID=K2M915_9PROT
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; TaxID=1616823 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospira sp. HJ.;"
GOSHIP-P18_170_1_13_153S_1017m_2_2128_10
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7502..8908)
-----------------
DNA (1407bp)
protein (469aa)
leuC1; 3-isopropylmalate dehydratase large subunit
3-isopropylmalate dehydratase large subunit n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z9Q1_AZOL4
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
GOSHIP-P18_170_1_13_153S_1017m_2_2128_11
unknown

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comp(8948..9073)
-----------------
DNA (126bp)
protein (42aa)

This feature has no annotations

Displaying 11 items

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