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GOSHIP-P18_170_1_13_153S_1017m_2_2470

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GOSHIP-P18_170_1_13_153S_1017m_2_2470_1
Pararhodospirillum photometricum, Pararhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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376..870
-----------------
DNA (495bp)
protein (165aa)
S-adenosylmethionine decarboxylase-like protein (EC:4.1.1.50)
S-adenosylmethionine decarboxylase proenzyme n=1 Tax=Rhodospirillum photometricum DSM 122 RepID=H6SSF5_RHOPH
S-adenosylmethionine decarboxylase proenzyme {ECO:0000256|HAMAP-Rule:MF_00464}; Short=AdoMetDC {ECO:0000256|HAMAP-Rule:MF_00464};; Short=SAMDC {ECO:0000256|HAMAP-Rule:MF_00464};; EC=4.1.1.50 {ECO:0000256|HAMAP-Rule:MF_00464, ECO:0000313|EMBL:CCG07834.1};; TaxID=1150469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Pararhodospirillum.;" source="Rhodospirillum photometricum DSM 122.;"
GOSHIP-P18_170_1_13_153S_1017m_2_2470_2
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

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870..1724
-----------------
DNA (855bp)
protein (285aa)
speE; Spermidine synthase (EC:2.5.1.16)
Spermidine synthase n=1 Tax=alpha proteobacterium BAL199 RepID=A8TNM3_9PROT
Polyamine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Putrescine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Spermidine synthase {ECO:0000256|HAMAP-Rule:MF_00198}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
GOSHIP-P18_170_1_13_153S_1017m_2_2470_3
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1761..2612)
-----------------
DNA (852bp)
protein (284aa)
coproporphyrinogen III oxidase
Coproporphyrinogen-III oxidase, aerobic n=1 Tax=Oceanibaculum indicum P24 RepID=K2K990_9PROT
Oxygen-dependent coproporphyrinogen-III oxidase {ECO:0000256|HAMAP-Rule:MF_00333}; Short=CPO {ECO:0000256|HAMAP-Rule:MF_00333};; Short=Coprogen oxidase {ECO:0000256|HAMAP-Rule:MF_00333};; Short=Coproporphyrinogenase {ECO:0000256|HAMAP-Rule:MF_00333};; EC=1.3.3.3 {ECO:0000256|HAMAP-Rule:MF_00333};; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
GOSHIP-P18_170_1_13_153S_1017m_2_2470_4
Rhodospirillaceae bacterium BRH_c57, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3272..3814
-----------------
DNA (543bp)
protein (181aa)
ubiquinol-cytochrome C reductase
hypothetical protein n=1 Tax=Novispirillum itersonii RepID=UPI000379A29C
Ubiquinol-cytochrome c reductase iron-sulfur subunit {ECO:0000256|RuleBase:RU004494}; EC=1.10.2.2 {ECO:0000256|RuleBase:RU004494};; TaxID=1629718 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae.;" source="Rhodospirillaceae bacterium BRH_c57.;"
GOSHIP-P18_170_1_13_153S_1017m_2_2470_5
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3826..5094
-----------------
DNA (1269bp)
protein (423aa)
petB; Cytochrome b/b6-like protein
cytochrome B n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B3B2B4
Cytochrome b {ECO:0000256|RuleBase:RU003385}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
GOSHIP-P18_170_1_13_153S_1017m_2_2470_6
Thalassospira profundimaris, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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5091..5867
-----------------
DNA (777bp)
protein (259aa)
cytochrome b/c1
Cytochrome b/c1 n=1 Tax=Thalassospira profundimaris WP0211 RepID=K2MB53_9PROT
Cytochrome b/c1 {ECO:0000313|EMBL:EKF09343.1}; TaxID=1177928 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospira profundimaris WP0211.;"
GOSHIP-P18_170_1_13_153S_1017m_2_2470_7
uncultured Rhizobiales bacterium HF4000_48A13, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5942..6697
-----------------
DNA (756bp)
protein (252aa)
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR n=2 Tax=Rhizobiales RepID=A7HU05_PARL1
8 dehydrogenases with different specificities (Related to short-chain alcohol dehydrogenases) {ECO:0000313|EMBL:ADI19690.1}; TaxID=710781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; environmental samples.;" source="uncultured Rhizobiales bacterium HF4000_48A13.;"
GOSHIP-P18_170_1_13_153S_1017m_2_2470_8
Rhodospirillaceae bacterium BRH_c57, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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6895..7401
-----------------
DNA (507bp)
protein (169aa)
hypothetical protein
hypothetical protein n=1 Tax=Citromicrobium sp. JLT1363 RepID=UPI000225ECC0
Integral membrane protein CcmA involved in cell shape determination {ECO:0000313|EMBL:KJS44227.1}; TaxID=1629718 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae.;" source="Rhodospirillaceae bacterium BRH_c57.;"
GOSHIP-P18_170_1_13_153S_1017m_2_2470_9
RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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7458..7862
-----------------
DNA (405bp)
protein (135aa)
hypothetical protein
hypothetical protein n=1 Tax=Pseudorhodobacter ferrugineus RepID=UPI0003B43B2A
Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
GOSHIP-P18_170_1_13_153S_1017m_2_2470_10
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7888..8667)
-----------------
DNA (780bp)
protein (260aa)
hydratase/decarboxylase
hypothetical protein n=1 Tax=alpha proteobacterium SCGC AB-629-F11 RepID=UPI0003796777
Uncharacterized protein {ECO:0000313|EMBL:ETW94006.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
GOSHIP-P18_170_1_13_153S_1017m_2_2470_11
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

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8827..9606
-----------------
DNA (780bp)
protein (260aa)
Putative aldolase class 2 protein
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000379B987
Ribulose-5-phosphate 4-epimerase {ECO:0000313|EMBL:EDP63092.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
GOSHIP-P18_170_1_13_153S_1017m_2_2470_12
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9611..11146)
-----------------
DNA (1536bp)
protein (512aa)
5-oxoprolinase (ATP-hydrolyzing) (EC:3.5.2.9)
5-oxoprolinase (ATP-hydrolyzing) n=1 Tax=Oceanibaculum indicum P24 RepID=K2JP89_9PROT
5-oxoprolinase (ATP-hydrolyzing) {ECO:0000313|EMBL:EKE76362.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
Displaying 12 items

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