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GOSHIP-P18_170_1_13_153S_1017m_2_2686

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GOSHIP-P18_170_1_13_153S_1017m_2_2686_1
Burkholderia glathei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1..210)
-----------------
DNA (210bp)
protein (70aa)
putative beta-lactamase-like protein
lactamase n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B6E629
Lactamase {ECO:0000313|EMBL:KDR37944.1}; TaxID=60547 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia glathei.;"
GOSHIP-P18_170_1_13_153S_1017m_2_2686_2
Desulfosporosinus youngiae, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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306..926
-----------------
DNA (621bp)
protein (207aa)
pentapeptide repeat-containing protein
hypothetical protein n=1 Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI0002625B08
Putative low-complexity protein {ECO:0000313|EMBL:EHQ92177.1}; TaxID=768710 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus youngiae DSM 17734.;"
GOSHIP-P18_170_1_13_153S_1017m_2_2686_3

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1328..2281
-----------------
DNA (954bp)
protein (318aa)
transporter
hypothetical protein n=1 Tax=SAR324 cluster bacterium SCGC AB-629-J17 RepID=UPI000360B95C
Putative transmembrane transport protein {ECO:0000313|EMBL:ABL97492.1}; TaxID=415448 species="Bacteria; environmental samples.;" source="uncultured marine bacterium HF130_81H07.;"
GOSHIP-P18_170_1_13_153S_1017m_2_2686_4
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2503..3177
-----------------
DNA (675bp)
protein (225aa)
nitroreductase
P-nitrobenzoate reductase NfnB n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002D2BA2D
Nitroreductase {ECO:0000313|EMBL:EHR71056.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
GOSHIP-P18_170_1_13_153S_1017m_2_2686_5
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(3368..3559)
-----------------
DNA (192bp)
protein (64aa)
paiB; FMN-binding negative transcriptional regulator
FMN-binding negative transcriptional regulator n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CW31_9BACT
FMN-binding negative transcriptional regulator {ECO:0000313|EMBL:EDY21623.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
GOSHIP-P18_170_1_13_153S_1017m_2_2686_6
uncultured Rhodospirillales bacterium HF4000_24M03, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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4345..4554
-----------------
DNA (210bp)
protein (70aa)
Cold shock protein, DNA binding
Cold shock proteins n=1 Tax=uncultured Rhodospirillales bacterium HF4000_24M03 RepID=E0XW43_9PROT
Cold shock proteins {ECO:0000313|EMBL:ADI18634.1}; TaxID=710788 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; environmental samples.;" source="uncultured Rhodospirillales bacterium HF4000_24M03.;"
GOSHIP-P18_170_1_13_153S_1017m_2_2686_7
Sedimenticola sp. SIP-G1, Sedimenticola, Gammaproteobacteria, Proteobacteria, Bacteria

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4867..5298
-----------------
DNA (432bp)
protein (144aa)
peptidylprolyl isomerase, FKBP-type
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Thiorhodococcus drewsii AZ1 RepID=G2E061_9GAMM
Peptidylprolyl isomerase {ECO:0000313|EMBL:AKH21203.1}; TaxID=1543721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Sedimenticola.;" source="Sedimenticola sp. SIP-G1.;"
GOSHIP-P18_170_1_13_153S_1017m_2_2686_8
marine gamma proteobacterium HTCC2143, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5312..5635)
-----------------
DNA (324bp)
protein (108aa)
NIPSNAP family containing protein
Uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YAF9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EAW33113.1}; TaxID=247633 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; BD1-7 clade.;" source="marine gamma proteobacterium HTCC2143.;"
GOSHIP-P18_170_1_13_153S_1017m_2_2686_9
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(5733..7280)
-----------------
DNA (1548bp)
protein (516aa)
propionyl-CoA carboxylase (EC:6.4.1.3)
Propionyl-CoA carboxylase beta chain id=4255771 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
GOSHIP-P18_170_1_13_153S_1017m_2_2686_10
Candidatus Pelagibacter sp. HTCC7211, Candidatus Pelagibacter, Pelagibacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7426..7728)
-----------------
DNA (303bp)
protein (101aa)
heme-degrading monooxygenase IsdG (EC:1.14.99.3)
hypothetical protein n=1 Tax=SAR324 cluster bacterium SCGC AB-629-J17 RepID=UPI000370ABEA
Antibiotic biosynthesis monooxygenase {ECO:0000313|EMBL:EDZ59705.1}; TaxID=439493 species="Bacteria; Proteobacteria; Alphaproteobacteria; Pelagibacterales; Pelagibacteraceae; Candidatus Pelagibacter.;" source="Candidatus Pelagibacter sp. HTCC7211.;"
GOSHIP-P18_170_1_13_153S_1017m_2_2686_11
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7789..9189)
-----------------
DNA (1401bp)
protein (467aa)
putative amidase
Putative amidase n=1 Tax=Variovorax paradoxus B4 RepID=T1XMD3_VARPD
Amidase {ECO:0000313|EMBL:GAN78053.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
GOSHIP-P18_170_1_13_153S_1017m_2_2686_12
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9433..10620
-----------------
DNA (1188bp)
protein (396aa)
hypothetical protein
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00037057A9
Uncharacterized protein {ECO:0000313|EMBL:EJL74597.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
GOSHIP-P18_170_1_13_153S_1017m_2_2686_13
Gordonia polyisoprenivorans, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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10748..11137
-----------------
DNA (390bp)
protein (130aa)
putative snoaL-like polyketide cyclase
Putative snoaL-like polyketide cyclase n=1 Tax=Gordonia polyisoprenivorans (strain DSM 44266 / VH2) RepID=H6MYN7_GORPV
Putative snoaL-like polyketide cyclase {ECO:0000313|EMBL:AFA71915.1}; TaxID=1112204 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia polyisoprenivorans (strain DSM 44266 / VH2).;"
GOSHIP-P18_170_1_13_153S_1017m_2_2686_14
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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11327..11821
-----------------
DNA (495bp)
protein (165aa)
NUDIX hydrolase
NUDIX hydrolase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HPP4_PARL1
Uncharacterized protein {ECO:0000313|EMBL:ETX05954.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
Displaying 14 items

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