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GOSHIP-P18_170_1_13_153S_1017m_2_741

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GOSHIP-P18_170_1_13_153S_1017m_2_741_1
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

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3..356
-----------------
DNA (354bp)
protein (118aa)
acyl-coA transferase/carnitine dehydratase
Acyl-CoA transferase/carnitine dehydratase n=1 Tax=alpha proteobacterium BAL199 RepID=A8TYI7_9PROT
Acyl-CoA transferase/carnitine dehydratase {ECO:0000313|EMBL:EDP62620.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
GOSHIP-P18_170_1_13_153S_1017m_2_741_2
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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360..1175
-----------------
DNA (816bp)
protein (272aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q212R0_RHOPB
Uncharacterized protein {ECO:0000313|EMBL:ABD88626.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
GOSHIP-P18_170_1_13_153S_1017m_2_741_3
RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1191..1508)
-----------------
DNA (318bp)
protein (106aa)
hypothetical protein
hypothetical protein n=1 Tax=Limnohabitans sp. Rim28 RepID=UPI00031869C2
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
GOSHIP-P18_170_1_13_153S_1017m_2_741_4
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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1679..2164
-----------------
DNA (486bp)
protein (162aa)
competence-damaged inducible protein
Competence/damage-inducible protein cinA id=4801472 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
GOSHIP-P18_170_1_13_153S_1017m_2_741_5
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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2258..2503
-----------------
DNA (246bp)
protein (82aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Halobacillus sp. BAB-2008 RepID=L5N4V1_9BACI
Uncharacterized protein {ECO:0000313|EMBL:KJB94051.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
GOSHIP-P18_170_1_13_153S_1017m_2_741_6
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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2504..3976
-----------------
DNA (1473bp)
protein (491aa)
Na+/solute symporter
Pantothenate permease protein n=1 Tax=Salinisphaera shabanensis E1L3A RepID=U2EKD6_9GAMM
Sodium:solute symporter {ECO:0000313|EMBL:KJB94052.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
GOSHIP-P18_170_1_13_153S_1017m_2_741_7
Synechocystis sp. PCC 6714, Synechocystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(3984..4610)
-----------------
DNA (627bp)
protein (209aa)
HupE-UreJ family cobalt transporter
Hydrogenase accessory protein-like protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IXD6_POLGS
HupE-UreJ family cobalt transporter {ECO:0000313|EMBL:AIE72701.1}; TaxID=1147 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechocystis.;" source="Synechocystis sp. (strain PCC 6714) (Aphanocapsa sp. (strain PCC; 6714)).;"
GOSHIP-P18_170_1_13_153S_1017m_2_741_8
Alkalilimnicola ehrlichii, Alkalilimnicola, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4642..5613)
-----------------
DNA (972bp)
protein (324aa)
beta-lactamase domain-containing protein
Beta-lactamase domain protein n=1 Tax=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) RepID=Q0A514_ALKEH
Beta-lactamase domain protein {ECO:0000313|EMBL:ABI58073.1}; Flags: Precursor;; TaxID=187272 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Alkalilimnicola.;" source="Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1).;"
GOSHIP-P18_170_1_13_153S_1017m_2_741_9
Cupriavidus sp. HPC(L), Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5610..6428)
-----------------
DNA (819bp)
protein (273aa)
hypothetical protein
hypothetical protein n=1 Tax=Methyloversatilis universalis RepID=UPI000368566B
Uncharacterized protein {ECO:0000313|EMBL:ESJ21528.1}; TaxID=1217418 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HPC(L).;"
GOSHIP-P18_170_1_13_153S_1017m_2_741_10
unknown

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comp(6484..6969)
-----------------
DNA (486bp)
protein (162aa)

This feature has no annotations

GOSHIP-P18_170_1_13_153S_1017m_2_741_11
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7234..8247
-----------------
DNA (1014bp)
protein (338aa)
amidohydrolase 2
Amidohydrolase 2 n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HUL4_PARL1
Amidohydrolase 2 {ECO:0000313|EMBL:ABS63597.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
GOSHIP-P18_170_1_13_153S_1017m_2_741_12
gamma proteobacterium HIMB55, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8272..9825)
-----------------
DNA (1554bp)
protein (518aa)
propionyl-CoA carboxylase
Acetyl-CoA carboxylase, carboxyltransferase component (Subunits alpha and beta) n=1 Tax=gamma proteobacterium HIMB55 RepID=H3NTM8_9GAMM
Acetyl-CoA carboxylase, carboxyltransferase component (Subunits alpha and beta) {ECO:0000313|EMBL:EHQ58271.1}; TaxID=745014 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade.;" source="gamma proteobacterium HIMB55.;"
GOSHIP-P18_170_1_13_153S_1017m_2_741_13
Marinobacter adhaerens, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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10044..11228
-----------------
DNA (1185bp)
protein (395aa)
L-carnitine dehydratase/bile acid-inducible protein F
L-carnitine dehydratase/bile acid-inducible protein F n=1 Tax=Marinobacter adhaerens (strain HP15) RepID=E4PJJ4_MARAH
L-carnitine dehydratase/bile acid-inducible protein F {ECO:0000313|EMBL:ADP97180.1}; TaxID=225937 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter adhaerens (strain HP15).;"
GOSHIP-P18_170_1_13_153S_1017m_2_741_14
Pseudomonas batumici, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11285..12319)
-----------------
DNA (1035bp)
protein (345aa)
pyridoxal-5'-phosphate-dependent protein
Threonine dehydratase n=1 Tax=Oceanibaculum indicum P24 RepID=K2JTE3_9PROT
Threonine dehydratase, catabolic {ECO:0000313|EMBL:KIH84936.1}; TaxID=226910 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas batumici.;"
GOSHIP-P18_170_1_13_153S_1017m_2_741_15
Magnetospira sp. QH-2, Magnetospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12357..14306)
-----------------
DNA (1950bp)
protein (650aa)
GH23 : related to soluble lytic transglycosylase
Soluble lytic murein transglycosylase and related regulatory protein n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W482_MAGSA
GH23 : related to soluble lytic transglycosylase {ECO:0000313|EMBL:CCQ73475.1}; TaxID=1288970 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospira.;" source="Magnetospira sp. QH-2.;"
GOSHIP-P18_170_1_13_153S_1017m_2_741_16
RIFOXYD12_FULL_Rhodospirillales_60_8_curated, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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14542..15447
-----------------
DNA (906bp)
protein (302aa)
dapA; dihydrodipicolinate synthase
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Caenispirillum salinarum AK4 RepID=K9HSV3_9PROT
Tax=RIFOXYD12_FULL_Rhodospirillales_60_8_curated
GOSHIP-P18_170_1_13_153S_1017m_2_741_17
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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15429..15899
-----------------
DNA (471bp)
protein (157aa)
smpB; SsrA-binding protein
SsrA-binding protein n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=SSRP_METNO
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
GOSHIP-P18_170_1_13_153S_1017m_2_741_18
Magnetospira sp. QH-2, Magnetospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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16934..17536
-----------------
DNA (603bp)
protein (201aa)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridinepyrophosphokinase (EC:2.7.6.3)
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI00037E13C3
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase {ECO:0000313|EMBL:CCQ73569.1}; EC=2.7.6.3 {ECO:0000313|EMBL:CCQ73569.1};; TaxID=1288970 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospira.;" source="Magnetospira sp. QH-2.;"
GOSHIP-P18_170_1_13_153S_1017m_2_741_19
Thalassospira sp. HJ, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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17674..18054
-----------------
DNA (381bp)
protein (127aa)
rpoZ; DNA-directed RNA polymerase subunit omega (EC:2.7.7.6)
DNA-directed RNA polymerase subunit omega n=1 Tax=Magnetospirillum sp. SO-1 RepID=M3AH16_9PROT
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=1616823 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospira sp. HJ.;"
GOSHIP-P18_170_1_13_153S_1017m_2_741_20
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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18182..20341
-----------------
DNA (2160bp)
protein (720aa)
Guanosine polyphosphate pyrophosphohydrolase/synthetase
Guanosine polyphosphate pyrophosphohydrolase/synthetase n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TKZ2_TISMK
Guanosine polyphosphate pyrophosphohydrolase/synthetase {ECO:0000313|EMBL:AFK53430.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;"
GOSHIP-P18_170_1_13_153S_1017m_2_741_21
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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20423..20986
-----------------
DNA (564bp)
protein (188aa)
hypothetical protein
hypothetical protein n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B605B1
Membrane protein {ECO:0000313|EMBL:KJB97092.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
GOSHIP-P18_170_1_13_153S_1017m_2_741_22
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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21007..21732
-----------------
DNA (726bp)
protein (242aa)
pyridoxine 5'-phosphate synthase
Pyridoxine 5'-phosphate synthase n=1 Tax=Thalassospira xiamenensis M-5 = DSM 17429 RepID=K2L6C5_9PROT
Pyridoxine 5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00279, ECO:0000256|SAAS:SAAS00088558}; Short=PNP synthase {ECO:0000256|HAMAP-Rule:MF_00279};; EC=2.6.99.2 {ECO:0000256|HAMAP-Rule:MF_00279, ECO:0000256|SAAS:SAAS00088588};; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
GOSHIP-P18_170_1_13_153S_1017m_2_741_23
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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21783..22049
-----------------
DNA (267bp)
protein (89aa)
acpS; 4'-phosphopantetheinyl transferase
Holo-[acyl-carrier-protein] synthase n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=ACPS_AZOC5
Holo-[acyl-carrier-protein] synthase {ECO:0000255|HAMAP-Rule:MF_00101}; Short=Holo-ACP synthase {ECO:0000255|HAMAP-Rule:MF_00101};; EC=2.7.8.7 {ECO:0000255|HAMAP-Rule:MF_00101};; 4'-phosphopantetheinyl transferase AcpS {ECO:0000255|HAMAP-Rule:MF_00101}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
Displaying 23 items

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