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GOSHIP-P18_170_1_13_153S_1017m_2_805

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GOSHIP-P18_170_1_13_153S_1017m_2_805_1
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..218
-----------------
DNA (216bp)
protein (72aa)
hypothetical protein
hypothetical protein n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B6623C
Uncharacterized protein {ECO:0000313|EMBL:KGM32851.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
GOSHIP-P18_170_1_13_153S_1017m_2_805_2
Rhodospirillaceae bacterium BRH_c57, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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222..710
-----------------
DNA (489bp)
protein (163aa)
putative universal stress protein UspA and related nucleotide-binding protein
hypothetical protein n=1 Tax=Novispirillum itersonii RepID=UPI000381E95E
Universal stress protein {ECO:0000313|EMBL:KJS36663.1}; TaxID=1629718 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae.;" source="Rhodospirillaceae bacterium BRH_c57.;"
GOSHIP-P18_170_1_13_153S_1017m_2_805_3
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(740..1825)
-----------------
DNA (1086bp)
protein (362aa)
putative polysaccharide deacetylase
Predicted xylanase/chitin deacetylase n=1 Tax=alpha proteobacterium BAL199 RepID=A8U0D5_9PROT
Predicted xylanase/chitin deacetylase {ECO:0000313|EMBL:EDP62194.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
GOSHIP-P18_170_1_13_153S_1017m_2_805_4
RIFCSPLOWO2_12_FULL_Rhodospirillales_58_28_curated, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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1963..2634
-----------------
DNA (672bp)
protein (224aa)
peptidase
Uncharacterized protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2J5M7_9PROT
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_58_28_curated
GOSHIP-P18_170_1_13_153S_1017m_2_805_5
Thalassospira xiamenensis, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2946..3194)
-----------------
DNA (249bp)
protein (83aa)
SirA family protein
response regulator SirA n=1 Tax=Thalassospira lucentensis RepID=UPI0003B572F0
SirA family protein {ECO:0000313|EMBL:AJD54176.1}; TaxID=1123366 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospira xiamenensis M-5 = DSM 17429.;"
GOSHIP-P18_170_1_13_153S_1017m_2_805_6
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3353..3787
-----------------
DNA (435bp)
protein (145aa)
Fur family transcriptional regulator
Ferric uptake regulator n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AF82_AZOBR
Fur family transcriptional regulator {ECO:0000313|EMBL:AIB10476.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
GOSHIP-P18_170_1_13_153S_1017m_2_805_7
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3882..4703
-----------------
DNA (822bp)
protein (274aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AG08_AZOBR
Hemolysin-like protein {ECO:0000313|EMBL:AIB13148.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
GOSHIP-P18_170_1_13_153S_1017m_2_805_8
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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4717..5526
-----------------
DNA (810bp)
protein (270aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase
1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NQL0_AZOS1
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000313|EMBL:BAI70689.1}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
GOSHIP-P18_170_1_13_153S_1017m_2_805_9
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

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5671..7107
-----------------
DNA (1437bp)
protein (479aa)
(dimethylallyl)adenosine tRNA methylthiotransferase
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=1 Tax=Maricaulis maris (strain MCS10) RepID=MIAB_MARMM
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
GOSHIP-P18_170_1_13_153S_1017m_2_805_10
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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7104..8162
-----------------
DNA (1059bp)
protein (353aa)
phoH; phosphate starvation inducible protein
phosphate starvation protein PhoH n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B47E13
Phosphate starvation protein PhoH {ECO:0000313|EMBL:EWY42388.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
GOSHIP-P18_170_1_13_153S_1017m_2_805_11
Methylobacterium radiotolerans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8159..8668
-----------------
DNA (510bp)
protein (170aa)
hypothetical protein
hypothetical protein n=1 Tax=Novispirillum itersonii RepID=UPI000377E550
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009};; TaxID=426355 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM; 2831).;"
GOSHIP-P18_170_1_13_153S_1017m_2_805_12
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8683..9618
-----------------
DNA (936bp)
protein (312aa)
hypothetical protein
CBS domain containing protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HZ85_PARL1
CBS domain containing protein {ECO:0000313|EMBL:ABS65218.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
GOSHIP-P18_170_1_13_153S_1017m_2_805_13
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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9627..11192
-----------------
DNA (1566bp)
protein (522aa)
lnt; Apolipoprotein N-acyltransferase (ALP N-acyltransferase) (EC:2.3.1.-)
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI00036EF47C
Apolipoprotein N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_01148}; Short=ALP N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_01148};; EC=2.3.1.- {ECO:0000256|HAMAP-Rule:MF_01148, ECO:0000313|EMBL:CDL00345.1};; TaxID=1430440 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
GOSHIP-P18_170_1_13_153S_1017m_2_805_14
Rhodospirillum rubrum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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11376..12542
-----------------
DNA (1167bp)
protein (389aa)
S-adenosylmethionine synthetase (EC:2.5.1.6)
S-adenosylmethionine synthase 2 n=2 Tax=Rhodospirillum rubrum RepID=METK2_RHORT
S-adenosylmethionine synthase 2 {ECO:0000255|HAMAP-Rule:MF_00086}; Short=AdoMet synthase 2 {ECO:0000255|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000255|HAMAP-Rule:MF_00086};; MAT 2 {ECO:0000255|HAMAP-Rule:MF_00086}; Methionine adenosyltransferase 2 {ECO:0000255|HAMAP-Rule:MF_00086}; TaxID=269796 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG; 4362 / NCIB 8255 / S1).;"
GOSHIP-P18_170_1_13_153S_1017m_2_805_15
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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12576..13274
-----------------
DNA (699bp)
protein (233aa)
trmB; tRNA (guanine-N(7)-)-methyltransferase (EC:2.1.1.33)
tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IVL5_RHOCS
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; tRNA(m7G46)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
GOSHIP-P18_170_1_13_153S_1017m_2_805_16
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

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13446..13946
-----------------
DNA (501bp)
protein (167aa)
hypothetical protein
Ribosome maturation factor RimP n=1 Tax=alpha proteobacterium BAL199 RepID=A8TZ05_9PROT
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
GOSHIP-P18_170_1_13_153S_1017m_2_805_17
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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13951..15576
-----------------
DNA (1626bp)
protein (542aa)
nusA; transcription elongation factor NusA
Transcription elongation factor NusA n=1 Tax=Phaeospirillum fulvum MGU-K5 RepID=S9TYL8_PHAFV
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
Displaying 17 items

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