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GOSHIP-P18_170_1_13_153S_1017m_2_5336

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GOSHIP-P18_170_1_13_153S_1017m_2_5336_1
GWF2_Alphaproteobacteria_58_20_curated, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..215)
-----------------
DNA (213bp)
protein (71aa)
rplS; 50S ribosomal protein L19
hypothetical protein n=1 Tax=Kordiimonas gwangyangensis RepID=UPI00037E100B
Tax=GWF2_Alphaproteobacteria_58_20_curated
GOSHIP-P18_170_1_13_153S_1017m_2_5336_2
Magnetospira sp. QH-2, Magnetospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(260..994)
-----------------
DNA (735bp)
protein (245aa)
trmD; tRNA (Guanine-N(1)-)-methyltransferase (EC:2.1.1.-)
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RM30_9RHIZ
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; TaxID=1288970 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospira.;" source="Magnetospira sp. QH-2.;"
GOSHIP-P18_170_1_13_153S_1017m_2_5336_3

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comp(994..1581)
-----------------
DNA (588bp)
protein (196aa)
16S rRNA processing protein RimM
hypothetical protein n=1 Tax=Aureimonas ureilytica RepID=UPI0003637EA2
Uncharacterized protein {ECO:0000313|EMBL:KKN89058.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
GOSHIP-P18_170_1_13_153S_1017m_2_5336_4
alpha proteobacterium RS24, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1550..2164)
-----------------
DNA (615bp)
protein (205aa)
30S ribosomal protein S16
30S ribosomal protein S16 n=1 Tax=alpha proteobacterium RS24 RepID=U2WSC2_9PROT
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=1397666 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium RS24.;"
GOSHIP-P18_170_1_13_153S_1017m_2_5336_5
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2276..3640)
-----------------
DNA (1365bp)
protein (455aa)
signal recognition particle subunit SRP54
Signal recognition particle protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2KHT1_9PROT
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
GOSHIP-P18_170_1_13_153S_1017m_2_5336_6
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3793..4494
-----------------
DNA (702bp)
protein (234aa)
diaminopimelate epimerase (EC:5.1.1.7)
Diaminopimelate epimerase n=1 Tax=Sphingobium chlorophenolicum L-1 RepID=F6EZK0_SPHCR
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=690566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chlorophenolicum L-1.;"
GOSHIP-P18_170_1_13_153S_1017m_2_5336_7
Nitrospirillum amazonense, Nitrospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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4491..5747
-----------------
DNA (1257bp)
protein (419aa)
2-methylthioadenine synthase
MiaB-like tRNA modifying enzyme n=1 Tax=Azospirillum amazonense Y2 RepID=G1Y1J3_9PROT
MiaB-like tRNA modifying enzyme {ECO:0000313|EMBL:EGY00613.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirillum amazonense Y2.;"
GOSHIP-P18_170_1_13_153S_1017m_2_5336_8
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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5744..6688
-----------------
DNA (945bp)
protein (315aa)
ftsY; signal recognition particle receptor
Signal recognition particle receptor FtsY n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NSZ2_AZOS1
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
GOSHIP-P18_170_1_13_153S_1017m_2_5336_9
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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6703..7263
-----------------
DNA (561bp)
protein (187aa)
putative septation protein IspZ-like
Probable intracellular septation protein A n=1 Tax=Caenispirillum salinarum AK4 RepID=K9GQ16_9PROT
Probable intracellular septation protein A {ECO:0000256|HAMAP-Rule:MF_00189, ECO:0000256|SAAS:SAAS00082307}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
GOSHIP-P18_170_1_13_153S_1017m_2_5336_10
RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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7311..7700
-----------------
DNA (390bp)
protein (130aa)
hypothetical protein
aldehyde-activating protein n=1 Tax=Methylohalobius crimeensis RepID=UPI0003B4BCF0
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
GOSHIP-P18_170_1_13_153S_1017m_2_5336_11
Sedimenticola sp. SIP-G1, Sedimenticola, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7747..8577)
-----------------
DNA (831bp)
protein (277aa)
sterol desaturase
sterol desaturase n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00037FBF0E
Fatty acid hydroxylase {ECO:0000313|EMBL:AKH19979.1}; TaxID=1543721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Sedimenticola.;" source="Sedimenticola sp. SIP-G1.;"
GOSHIP-P18_170_1_13_153S_1017m_2_5336_12
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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8812..9516
-----------------
DNA (705bp)
protein (235aa)
lysS; lysyl-tRNA synthetase, class I
Lysine--tRNA ligase n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TP93_TISMK
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00177}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00177};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00177}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;"
Displaying 12 items

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