ggKbase home page

GOSHIP-P18_170_1_13_153S_1017m_2_276_17

Organism: GOSHIP-P18_170_1_13_153S_1017m_2_Alphaproteobacteria_48_9

near complete RP 43 / 55 BSCG 47 / 51 ASCG 7 / 38 MC: 1
Location: comp(20478..22406)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD similarity KEGG
DB: KEGG
  • Identity: 65.7
  • Coverage: 653.0
  • Bit_score: 816
  • Evalue 3.40e-234
RNA polymerase sigma factor RpoD n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6INX9_RHOCS similarity UNIREF
DB: UNIREF100
  • Identity: 65.7
  • Coverage: 648.0
  • Bit_score: 816
  • Evalue 1.60e-233
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.7
  • Coverage: 653.0
  • Bit_score: 816
  • Evalue 1.70e-233

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Azospirillum brasilense → Azospirillum → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1929
ATGTCAAAACAAGAAGCAACAGTGCCGGCAGAAAATGCCCGGCGCGATTCAAGTGACGTACCCCTAGTTGACACTGCTGGAGCTGCTGTCAAACAACTAATCCAACTGGGCACCCAACGTGGGTACATTACTTATGAAGAGTTGAACGCAACCCTCCCGCCTGACAAAAACTCCTCGGAACAAATTGAGGACATCATGGCAATGATCTCAGAGATGGGGATCAATGTAGTAGAGGACGAGGAAAATGATGACGCGCCCTCTACAGCTAATGGGGCCCAAAATTCAGCTGGAAACACAAAAGGGGAGGAGGAGTTAGGTCGTACCGACGACCCCGTCCGCATGTATTTGAGGGAAATGGGCACCGTTGAGCTCTTGTCCCGTGAAGGTGAAATAGCAATAGCGAAGCGCATAGAGGCAGGACGAGGAATGATGATTGGATCCGTCTGTGAAAGTCCGGTCACACTTCAAGTCATCGGCTCGTGGCATGAAGCAATTACCACGGAACAAATGTTACTTCGCGAAGCCATAGATTTAGATGCTACGTATGGTAGCTCAAACAATAACACCGACAATATTCCCAATGGCTCCTCGAACGTGGCGGAAGCAGCGGAGGAGGAGGACTCTGAAGATGACGATACAGAATCCGACTCTGATGAAGGGAATGTGCCTCTCTCAACTATGGAGGAGGCACTCCTTCCGACACTCGTTCAAACCTTTGGGGCTATTTCTAAAATTGCAAAGAAAGTGGATCGAATTCAAGGCCAAAGGTTGGATGCCGCTGCGGTTAGACAAACACTAAAACCAGCGACTCTGAGGCTCTACGCGAAACTGAAAAATGAAGTCGCCGAGTTAATGGATGGCATAGAAATTAATAACTTTCGAATTGAGGAACTAGTAGATCAGTTATACGGCTTAAATCGCCGACTCATGACTCTTGAAGGTAAACTTTTTCGATTAGCCTCAAAATATAGAATTAGCCGGGAAAATTTCCTGAAACAGTACATTAGCAATGAGTTGGAAATCAATTGGGCTCGCCGAGTAAGTCGCCTGAAGGAAAAGGGCTGGAAAGCATTTGCCAGGGAAAGCCGGGACGAGATTAAAGAGTTACGCTCCGGAATTCTCGAGATTGCAGCAATTGCTAGTCTGGACATTCCAGAATTTCGTCAAATAGTTTCCGCTGTGCAGAAGGGTGAAAGGGAAGCTGGGCTCGCTAAAAAAGAAATGATTGAGGCTAATTTACGTTTAGTTATCTCAATTGCAAAAAAATATACAAATCGGGGCCTTCAGTTTTTAGACCTTATTCAAGAAGGGAATATTGGACTAATGAAGGCTGTGGATAAGTTTGAATATCGCCGAGGATATAAATTTTCAACCTATGCTACATGGTGGATTAGACAAGCTATAACTCGGTCCATAGCTGATCAAGCAAGAACCATTAGAATTCCCGTACATATGATTGAAACCATAAATAAGCTCGTACGTACTTCCCGCCAGATGCTGCACGAAATCGGACGCGAGCCAACCCCGGATGAATTGGCGATAAAACTGAGCATGCCGATCGAGAAAGTGCAAAAAGTCCTTAAAATTGCTAAGGAACCAATTAGCCTTGAAACCCCTATAGGAGATGAAGAGGATAGTCATCTCGGGGATTTCATAGAAGACAAAAATGCGGTTATACCACTTGATGCCGCTGTCCATTCAAATCTGCGGGAAACTACGACGCGTGTATTATCATCGCTAACTCCTCGCGAGGAACGTGTTCTCCGAATGCGATTTGGCATCGGAATGAATACGGACCACACTCTCGAGGAGGTTGGCCAGCAATTTTCCGTTACGCGCGAGCGTATTAGGCAAATTGAAGCTAAAGCGCTACGCAAGCTGAAACACCCCTCTCGTTCACGCAAACTACGAAGCTTTCTTGATACCTAA
PROTEIN sequence
Length: 643
MSKQEATVPAENARRDSSDVPLVDTAGAAVKQLIQLGTQRGYITYEELNATLPPDKNSSEQIEDIMAMISEMGINVVEDEENDDAPSTANGAQNSAGNTKGEEELGRTDDPVRMYLREMGTVELLSREGEIAIAKRIEAGRGMMIGSVCESPVTLQVIGSWHEAITTEQMLLREAIDLDATYGSSNNNTDNIPNGSSNVAEAAEEEDSEDDDTESDSDEGNVPLSTMEEALLPTLVQTFGAISKIAKKVDRIQGQRLDAAAVRQTLKPATLRLYAKLKNEVAELMDGIEINNFRIEELVDQLYGLNRRLMTLEGKLFRLASKYRISRENFLKQYISNELEINWARRVSRLKEKGWKAFARESRDEIKELRSGILEIAAIASLDIPEFRQIVSAVQKGEREAGLAKKEMIEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLVRTSRQMLHEIGREPTPDELAIKLSMPIEKVQKVLKIAKEPISLETPIGDEEDSHLGDFIEDKNAVIPLDAAVHSNLRETTTRVLSSLTPREERVLRMRFGIGMNTDHTLEEVGQQFSVTRERIRQIEAKALRKLKHPSRSRKLRSFLDT*