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ar4r2_scaffold_314

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_314_1

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62..481
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K1ZJV3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD44673.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ar4r2_scaffold_314_2

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comp(510..938)
DNA (429bp) protein (143aa)
transmembrane_regions 23..45 id=124728 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Uncharacterized protein {ECO:0000313|EMBL:EKD29258.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ar4r2_scaffold_314_3
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(955..1191)
DNA (237bp) protein (79aa)
hypothetical protein; K06960 id=34454 bin=ACD2 species=ACD2 genus=ACD2 taxon_order=ACD2 taxon_class=ACD2 phylum=BD1-5 tax=ACD2 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
RNA-binding protein
Tax=ACD2
ar4r2_scaffold_314_4

Not on your lists


comp(1248..1487)
DNA (240bp) protein (80aa)
30S ribosomal protein S16P id=34412 bin=ACD2 species=ACD2 genus=ACD2 taxon_order=ACD2 taxon_class=ACD2 phylum=BD1-5 tax=ACD2 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
30S ribosomal protein S16P {ECO:0000313|EMBL:EKE29499.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
hypothetical protein
ar4r2_scaffold_314_trna_3
unknown

Not on your lists

comp(1630..1711)
DNA (82bp)
transferRNA Leu
ar4r2_scaffold_314_5
ACD78, Gracilibacteria, Bacteria

Not on your lists


comp(1739..1936)
DNA (198bp) protein (66aa)
ribosomal protein L28; K02902 large subunit ribosomal protein L28 id=124732 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
rpmB; 50S ribosomal protein L28
Tax=ACD78
ar4r2_scaffold_314_6
ACD78, Gracilibacteria, Bacteria

Not on your lists


comp(1967..2284)
DNA (318bp) protein (106aa)
ribosomal protein S10; K02946 small subunit ribosomal protein S10 id=124731 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
rpsJ; 30S ribosomal protein S10
Tax=ACD78
ar4r2_scaffold_314_7

Not on your lists

comp(2379..3569)
DNA (1191bp) protein (397aa)
sgl:SG2283 tuf; elongation factor Tu (EC:3.6.5.3); K02358 elongation factor EF-Tu [EC:3.6.5.3] id=69726 bin=ACD49 species=ACD49 genus=ACD49 taxon_order=ACD49 taxon_class=ACD49 phylum=BD1-5 tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
tuf; elongation factor Tu (EC:3.6.5.3) rbh
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ar4r2_scaffold_314_8
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(3741..3950)
DNA (210bp) protein (70aa)
seg 54..63 id=123683 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Tax=CG_GN02-01
ar4r2_scaffold_314_trna_2
unknown

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comp(4052..4125)
DNA (74bp)
transferRNA Ala
ar4r2_scaffold_314_trna_1
unknown

Not on your lists

comp(4235..4308)
DNA (74bp)
transferRNA Asp
ar4r2_scaffold_314_9

Not on your lists

comp(4438..5331)
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2GRN7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKE25975.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
cell division protein FtsX
ar4r2_scaffold_314_10
unknown

Not on your lists

5499..8228
DNA (2730bp) protein (910aa)
hypothetical protein
seg 360..365 id=982625 bin=RAAC1_SR1 species=RAAC1_SR1 genus=RAAC1_SR1 taxon_order=RAAC1_SR1 taxon_class=RAAC1_SR1 phylum=SR1 tax=RAAC1_SR1 organism_group=SR1
ar4r2_scaffold_314_11
unknown

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8311..11031
DNA (2721bp) protein (907aa)

This feature has no annotations

ar4r2_scaffold_314_12
Peptoniphilus lacrimalis, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11126..12181
DNA (1056bp) protein (352aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};; Queuosine biosynthesis protein QueA {ECO:0000256|HAMAP-Rule:MF_00113}; TaxID=1401070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus lacrimalis DNF00528.;"
queA; S-adenosylmethionine--tRNA ribosyltransferase-isomerase (EC:5.-.-.-) rbh
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VUV9_9FIRM rbh
ar4r2_scaffold_314_13
Fusobacterium sp. CAG:815, Melainabacteria, Bacteria

Not on your lists

12259..13266
DNA (1008bp) protein (336aa)
Diguanylate cyclase n=1 Tax=Fusobacterium sp. CAG:815 RepID=R7LVV1_9FUSO
Diguanylate cyclase {ECO:0000313|EMBL:CDE92186.1}; TaxID=1262901 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium; environmental samples.;" source="Fusobacterium sp. CAG:815.;"
diguanylate cyclase
ar4r2_scaffold_314_14
Riemerella anatipestifer, Riemerella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13296..14309)
DNA (1014bp) protein (338aa)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Riemerella anatipestifer RA-CH-1 RepID=J9R855_RIEAN
peptidyl-prolyl cis-trans isomerase
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU004231}; TaxID=1228997 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Riemerella.;" source="Riemerella anatipestifer RA-CH-1.;"
ar4r2_scaffold_314_15
Micromonas sp. RCC299, Micromonas, Mamiellales, Mamiellophyceae, Chlorophyta, Viridiplantae

Not on your lists

comp(14335..14841)
DNA (507bp) protein (169aa)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Micromonas sp. (strain RCC299 / NOUM17) RepID=C1FGE1_MICSR
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU004231}; TaxID=296587 species="Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas.;" source="Micromonas sp. (strain RCC299 / NOUM17) (Picoplanktonic green alga).;"
FKBP-type peptidyl-prolyl cis-trans isomerase
ar4r2_scaffold_314_16

Not on your lists

comp(14859..17906)
DNA (3048bp) protein (1016aa)
mfd; Transcription-repair-coupling factor (EC:3.6.4.-)
Transcription-repair coupling factor n=1 Tax=uncultured bacterium (gcode 4) RepID=K2G1U8_9BACT rbh
Transcription-repair coupling factor {ECO:0000313|EMBL:EKE29143.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ar4r2_scaffold_314_17

Not on your lists

17987..18547
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2AW50_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD65936.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
glycoprotease
ar4r2_scaffold_314_18

Not on your lists

18558..19073
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2AD25_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD65935.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ar4r2_scaffold_314_19

Not on your lists

19089..19988
DNA (900bp) protein (300aa)
GTP-binding protein era homolog n=1 Tax=Spiroplasma citri RepID=Q14P63_SPICI id=50348 bin=ACD3 species=Spiroplasma citri genus=Spiroplasma taxon_order=Entomoplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=ACD3 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
era; GTP-binding protein Era
ar4r2_scaffold_314_20

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comp(20020..21123)
DNA (1104bp) protein (368aa)
DsbA family oxidoreductase n=3 Tax=Pseudomonas RepID=D5MPB3_PSEPU id=123612 bin=ACD78 species=unknown genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
DsbA family oxidoreductase {ECO:0000313|EMBL:EKD29793.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
Sodium/proton antiporter
ar4r2_scaffold_314_21

Not on your lists

comp(21259..21534)
DNA (276bp) protein (92aa)
Plasmid_stabil id=123556 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Uncharacterized protein {ECO:0000313|EMBL:EKD30389.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ar4r2_scaffold_314_22
unknown

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comp(21527..21703)
DNA (177bp) protein (59aa)

This feature has no annotations

ar4r2_scaffold_314_23

Not on your lists

comp(21832..22107)
DNA (276bp) protein (92aa)
Plasmid_stabil id=123556 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Uncharacterized protein {ECO:0000313|EMBL:EKD30389.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ar4r2_scaffold_314_24
unknown

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comp(22100..22279)
DNA (180bp) protein (60aa)

This feature has no annotations

ar4r2_scaffold_314_25
RIFOXYB2_FULL_Peregrinibacteria_32_7_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(22411..22641)
DNA (231bp) protein (77aa)
Tax=RIFOXYB2_FULL_Peregrinibacteria_32_7_curated
ar4r2_scaffold_314_26
unknown

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comp(22643..22813)
DNA (171bp) protein (57aa)

This feature has no annotations

ar4r2_scaffold_314_27
R_OD1_Kaiserbacteria_49_16, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

comp(23024..23500)
DNA (477bp) protein (159aa)
hypothetical protein
seg 13..23 id=983505 bin=RAAC1_SR1 species=RAAC1_SR1 genus=RAAC1_SR1 taxon_order=RAAC1_SR1 taxon_class=RAAC1_SR1 phylum=SR1 tax=RAAC1_SR1 organism_group=SR1
Tax=RIFCSPHIGHO2_02_FULL_OD1_Kaiserbacteria_49_16_curated
Displaying items 1-30 of 46 in total

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