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ar4r2_scaffold_625

Search features with annotation key words

Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_625_1
unknown

Not on your lists

127..783
DNA (657bp) protein (219aa)

This feature has no annotations

ar4r2_scaffold_625_2

Not on your lists

874..2886
DNA (2013bp) protein (671aa)
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium (gcode 4) RepID=K2F5R8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKE26426.1}; Flags: Fragment;; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
F-box associated region protein
ar4r2_scaffold_625_trna_1
unknown

Not on your lists

3028..3100
DNA (73bp)
transferRNA Thr
ar4r2_scaffold_625_trna_2
unknown

Not on your lists

3189..3270
DNA (82bp)
transferRNA Tyr
ar4r2_scaffold_625_trna_3
unknown

Not on your lists

3294..3375
DNA (82bp)
transferRNA Leu
ar4r2_scaffold_625_3

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3442..3660
DNA (219bp) protein (73aa)
50S ribosomal protein L31 n=1 Tax=uncultured bacterium (gcode 4) RepID=K2G5A9_9BACT
50S ribosomal protein L31 {ECO:0000256|HAMAP-Rule:MF_00501, ECO:0000256|SAAS:SAAS00004482}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
rpmE; 50S ribosomal protein L31
ar4r2_scaffold_625_4
RIFOXYB2_FULL_Peregrinibacteria_32_7_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(3689..4216)
DNA (528bp) protein (176aa)
Putative uncharacterized protein id=3769746 bin=GWC2_OP3-like_45_7 species=PER_GWF2_39_17 genus=PER_GWF2_39_17 taxon_order=PER_GWF2_39_17 taxon_class=PER_GWF2_39_17 phylum=PER tax=GWC2_OP3-like_45_7 organism_group=OP3 (Omnitrophica)
dihydrofolate reductase
Tax=RIFOXYB2_FULL_Peregrinibacteria_32_7_curated
ar4r2_scaffold_625_5

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comp(4280..4648)
DNA (369bp) protein (123aa)
transmembrane_regions 55..77 id=34694 bin=ACD2 species=ACD2 genus=ACD2 taxon_order=ACD2 taxon_class=ACD2 phylum=BD1-5 tax=ACD2 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Uncharacterized protein {ECO:0000313|EMBL:EKE29852.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
hypothetical protein
ar4r2_scaffold_625_6

Not on your lists

comp(4662..5030)
DNA (369bp) protein (123aa)
transmembrane_regions 55..77 id=34694 bin=ACD2 species=ACD2 genus=ACD2 taxon_order=ACD2 taxon_class=ACD2 phylum=BD1-5 tax=ACD2 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Uncharacterized protein {ECO:0000313|EMBL:EKE29852.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
hypothetical protein
ar4r2_scaffold_625_7

Not on your lists

5145..5696
DNA (552bp) protein (184aa)
putative O-methyltransferase; caffeoyl-CoA O-methyltransferase (EC:2.1.1.-)
O-methyltransferase family 3 n=1 Tax=uncultured bacterium (gcode 4) RepID=K2FZV9_9BACT
O-methyltransferase family 3 {ECO:0000313|EMBL:EKE27442.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ar4r2_scaffold_625_8

Not on your lists

5742..6908
DNA (1167bp) protein (389aa)
3-dehydroquinate synthase n=1 Tax=uncultured bacterium (gcode 4) RepID=K2BAV3_9BACT
3-dehydroquinate synthase {ECO:0000256|SAAS:SAAS00196478}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
3-dehydroquinate synthase
amino acid on route to tryptophan Jill Banfield (11/8/16)
ar4r2_scaffold_625_9
Leptotrichia buccalis, Leptotrichia, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists


7045..7332
DNA (288bp) protein (96aa)
30S ribosomal protein S6 n=1 Tax=Leptotrichia buccalis (strain ATCC 14201 / DSM 1135 / JCM 12969 / NCTC 10249) RepID=C7NDG8_LEPBD
30S ribosomal protein S6
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=523794 species="Bacteria; Fusobacteria; Fusobacteriales; Leptotrichiaceae; Leptotrichia.;" source="Leptotrichia buccalis (strain ATCC 14201 / DSM 1135 / JCM 12969 / NCTC; 10249).;"
ar4r2_scaffold_625_10
ACD2, Gracilibacteria, Bacteria

Not on your lists

7357..7755
DNA (399bp) protein (133aa)
Single-stranded DNA-binding protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2GHD5_9BACT
single stranded DNA-binding protein
Tax=ACD2
ar4r2_scaffold_625_11

Not on your lists


7863..8081
DNA (219bp) protein (73aa)
Ribosomal protein S18 n=1 Tax=sediment metagenome RepID=D9PJ92_9ZZZZ
Ribosomal protein S18 {ECO:0000313|EMBL:EFK96369.1}; TaxID=749907 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="sediment metagenome.;"
rpsR; 30S ribosomal protein S18
ar4r2_scaffold_625_12
RifOxyC12_full_OD1_Magasanikbacteria_33_11_curated, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(8137..9744)
DNA (1608bp) protein (536aa)
hypothetical protein id=5090471 bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
hypothetical protein
Tax=RifOxyC12_full_OD1_Magasanikbacteria_33_11_curated
ar4r2_scaffold_625_13

Not on your lists

comp(9747..11219)
DNA (1473bp) protein (491aa)
undecaprenyl-phosphate galactose phosphotransferase (EC:2.7.8.6) id=69461 bin=ACD49 species=ACD49 genus=ACD49 taxon_order=ACD49 taxon_class=ACD49 phylum=BD1-5 tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Undecaprenyl-phosphate galactose phosphotransferase {ECO:0000313|EMBL:EKD66504.1}; EC=2.7.8.6 {ECO:0000313|EMBL:EKD66504.1};; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
hypothetical protein
ar4r2_scaffold_625_14
unknown

Not on your lists

11238..11360
DNA (123bp) protein (41aa)

This feature has no annotations

ar4r2_scaffold_625_15

Not on your lists

11377..12177
DNA (801bp) protein (267aa)
seg 17..31 id=124233 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Uncharacterized protein {ECO:0000313|EMBL:EKD29485.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ar4r2_scaffold_625_16
BJP_08E140C01_Flavobacteriales_35_8, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

12257..13468
DNA (1212bp) protein (404aa)
hypothetical protein n=1 Tax=Omnitrophica bacterium SCGC AAA252-B19 RepID=UPI00035F95C1
hypothetical protein
Tax=BJP_08E140C01_Flavobacteriales_35_8
ar4r2_scaffold_625_17
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

13546..14751
DNA (1206bp) protein (402aa)
hypothetical protein n=1 Tax=Omnitrophica bacterium SCGC AAA252-B19 RepID=UPI00035F95C1
hypothetical protein
Tax=CG_GN02-01
ar4r2_scaffold_625_18
unknown

Not on your lists

14854..15813
DNA (960bp) protein (320aa)

This feature has no annotations

ar4r2_scaffold_625_19
Grimontia indica, Grimontia, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15834..16322)
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Grimontia sp. AK16 RepID=R1IFC1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EOD79421.1}; TaxID=1056512 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Grimontia.;" source="Grimontia indica.;"
hypothetical protein
ar4r2_scaffold_625_20

Not on your lists

comp(16350..16646)
DNA (297bp) protein (99aa)
seg 3..16 id=69109 bin=ACD49 species=ACD49 genus=ACD49 taxon_order=ACD49 taxon_class=ACD49 phylum=BD1-5 tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Uncharacterized protein {ECO:0000313|EMBL:EKD65949.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ar4r2_scaffold_625_21
unknown

Not on your lists

comp(16650..16868)
DNA (219bp) protein (73aa)

This feature has no annotations

ar4r2_scaffold_625_22
unknown

Not on your lists

comp(16962..17174)
DNA (213bp) protein (71aa)

This feature has no annotations

ar4r2_scaffold_625_23
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(17200..18660)
DNA (1461bp) protein (487aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2FDR2_9BACT
Tax=CG_GN02-01
ar4r2_scaffold_625_24

Not on your lists

comp(18786..19835)
DNA (1050bp) protein (350aa)
DNA replication and repair protein RecF n=1 Tax=uncultured bacterium (gcode 4) RepID=K2F9K6_9BACT
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
recF; DNA replication and repair protein RecF
ar4r2_scaffold_625_25
unknown

Not on your lists

comp(19837..20121)
DNA (285bp) protein (95aa)

This feature has no annotations

ar4r2_scaffold_625_26
unknown

Not on your lists

20188..20544
DNA (357bp) protein (119aa)

This feature has no annotations

ar4r2_scaffold_625_27

Not on your lists

20550..21131
DNA (582bp) protein (194aa)
PROKAR_LIPOPROTEIN id=68985 bin=ACD49 species=ACD49 genus=ACD49 taxon_order=ACD49 taxon_class=ACD49 phylum=BD1-5 tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Uncharacterized protein {ECO:0000313|EMBL:EKD66373.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
Displaying items 1-30 of 53 in total

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