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ar4r2_scaffold_90

Search features with annotation key words

Displaying items 1-30 of 70 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_90_1
Pseudoalteromonas citrea, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..503
DNA (501bp) protein (167aa)
Integrase catalytic subunit n=1 Tax=Pseudoalteromonas citrea NCIMB 1889 RepID=U1KQN4_9GAMM
Integrase catalytic subunit {ECO:0000313|EMBL:ERG18313.1}; TaxID=1117314 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseudoalteromonas citrea NCIMB 1889.;"
transposase
ar4r2_scaffold_90_2

Not on your lists

comp(508..2052)
DNA (1545bp) protein (515aa)
Polysaccharide biosynthesis protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K1XYS9_9BACT
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:EKD30317.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
polysaccharide biosynthesis protein
ar4r2_scaffold_90_3

Not on your lists

comp(2082..3128)
DNA (1047bp) protein (349aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
tRNA(Ile)-lysidine synthase n=1 Tax=uncultured bacterium (gcode 4) RepID=K2FY43_9BACT
cell cycle protein
ar4r2_scaffold_90_4

Not on your lists

comp(3218..3529)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2GTZ6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKE26825.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
hypothetical protein
ar4r2_scaffold_90_5

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comp(3550..3978)
DNA (429bp) protein (143aa)
MarR family transcriptional regulator n=1 Tax=uncultured bacterium (gcode 4) RepID=K2GFW8_9BACT
MarR family transcriptional regulator {ECO:0000313|EMBL:EKE29219.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
slyA_3; Transcriptional regulator SlyA
ar4r2_scaffold_90_6
unknown

Not on your lists

comp(4042..4326)
DNA (285bp) protein (95aa)

This feature has no annotations

ar4r2_scaffold_90_7

Not on your lists

comp(4400..5458)
DNA (1059bp) protein (353aa)
Phospho-N-acetylmuramoyl-pentapeptide-transferase {ECO:0000256|HAMAP-Rule:MF_00038}; EC=2.7.8.13 {ECO:0000256|HAMAP-Rule:MF_00038};; UDP-MurNAc-pentapeptide phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00038}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase (EC:2.7.8.13)
Phospho-N-acetylmuramoyl-pentapeptide-transferase n=1 Tax=uncultured bacterium (gcode 4) RepID=K1XWT7_9BACT rbh
ar4r2_scaffold_90_8
unknown

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5574..6188
DNA (615bp) protein (205aa)

This feature has no annotations

ar4r2_scaffold_90_9

Not on your lists

comp(6208..6891)
DNA (684bp) protein (228aa)
oxidoreductase FAD/NAD(P)-binding subunit; K05784 benzoate 1,2-dioxygenase electron transfer component id=69467 bin=ACD49 species=ACD49 genus=ACD49 taxon_order=ACD49 taxon_class=ACD49 phylum=BD1-5 tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Uncharacterized protein {ECO:0000313|EMBL:EKD66451.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
benC; benzoate 1,2-dioxygenase reductase component
Phenol hydroxylase reductase (IPR001221) from Interpro,Ferredoxin reductase (FNR), an FAD and NAD(P) binding protein - domain (NCBI) Jill Banfield (11/8/16)
ar4r2_scaffold_90_10
unknown

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7053..9005
DNA (1953bp) protein (651aa)
UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase
ar4r2_scaffold_90_11

Not on your lists

9085..10383
DNA (1299bp) protein (433aa)
hypothetical protein; K02335 DNA polymerase I [EC:2.7.7.7] id=69614 bin=ACD49 species=ACD49 genus=ACD49 taxon_order=ACD49 taxon_class=ACD49 phylum=BD1-5 tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
polA; DNA polymerase I PolA (EC:2.7.7.7)
Uncharacterized protein {ECO:0000313|EMBL:EKD66696.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ar4r2_scaffold_90_12
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

10415..11335
DNA (921bp) protein (307aa)
Protease HtpX homolog n=1 Tax=uncultured bacterium (gcode 4) RepID=K1XGJ8_9BACT
endopeptidase
Tax=CG_GN02-01
ar4r2_scaffold_90_13
unknown

Not on your lists

11423..12631
DNA (1209bp) protein (403aa)

This feature has no annotations

ar4r2_scaffold_90_14
GWA2_WS6_37_6, WS6, Bacteria

Not on your lists

12833..13111
DNA (279bp) protein (93aa)
Uncharacterized protein id=5101951 bin=GWF1_WS6_37_7 species=WS6_GWF1_36_7 genus=WS6_GWF1_36_7 taxon_order=WS6_GWF1_36_7 taxon_class=WS6_GWF1_36_7 phylum=WS6 tax=GWF1_WS6_37_7 organism_group=WS6 (Doikabacteria)
Uncharacterized protein {ECO:0000313|EMBL:KKQ36147.1}; TaxID=1619087 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWA2_37_6.;"
hypothetical protein
ar4r2_scaffold_90_15
RHI_RIF_OD1_10_44_12b, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

13119..13451
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJT0_9BACT
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_RIF_OD1_10_44_12b_curated
ar4r2_scaffold_90_16
CG_GN02-02, Gracilibacteria, Bacteria

Not on your lists


13699..15120
DNA (1422bp) protein (474aa)
Glycine--tRNA ligase n=1 Tax=uncultured bacterium (gcode 4) RepID=K2FX80_9BACT rbh
glycyl-tRNA synthetase rbh
Tax=CG_GN02-02
ar4r2_scaffold_90_17
unknown

Not on your lists

comp(15149..15388)
DNA (240bp) protein (80aa)

This feature has no annotations

ar4r2_scaffold_90_18
CG_CPR18-01, CG_CPR18, Bacteria

Not on your lists

15524..15946
DNA (423bp) protein (141aa)
hypothetical protein id=50638 bin=ACD3 species=ACD3 genus=ACD3 taxon_order=ACD3 taxon_class=ACD3 phylum=BD1-5 tax=ACD3 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
hypothetical protein
Tax=CG_CPR18-01
ar4r2_scaffold_90_19
unknown

Not on your lists

16016..16603
DNA (588bp) protein (196aa)

This feature has no annotations

ar4r2_scaffold_90_20
ACD78, Gracilibacteria, Bacteria

Not on your lists

comp(16589..17923)
DNA (1335bp) protein (445aa)
General secretion pathway protein E n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UYH2_9AQUI id=124478 bin=ACD78 species=Hydrogenivirga sp. 128-5-R1-1 genus=Hydrogenivirga taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
type IV pilus assembly protein PilB
Tax=ACD78
ar4r2_scaffold_90_21
unknown

Not on your lists

17976..18569
DNA (594bp) protein (198aa)

This feature has no annotations

ar4r2_scaffold_90_22

Not on your lists

18591..19952
DNA (1362bp) protein (454aa)
hypothetical protein id=34722 bin=ACD2 species=ACD2 genus=ACD2 taxon_order=ACD2 taxon_class=ACD2 phylum=BD1-5 tax=ACD2 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
Uncharacterized protein {ECO:0000313|EMBL:EKE29829.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
hypothetical protein
ar4r2_scaffold_90_23

Not on your lists

20042..21691
DNA (1650bp) protein (550aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2BAP4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD65808.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
recJ; putative single-stranded-DNA-specific exonuclease rbh
ar4r2_scaffold_90_24

Not on your lists

21712..23046
DNA (1335bp) protein (445aa)
UDP-N-acetylmuramate-L-alanine ligase {ECO:0000313|EMBL:EKD66363.1}; EC=6.3.2.8 {ECO:0000313|EMBL:EKD66363.1};; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
UDP-N-acetylmuramate-L-alanine ligase n=1 Tax=uncultured bacterium (gcode 4) RepID=K2BC23_9BACT rbh
murC; UDP-N-acetylmuramate--L-alanine ligase
ar4r2_scaffold_90_25
Thermodesulfobacterium geofontis, Thermodesulfobacterium, Thermodesulfobacteriales, Thermodesulfobacteria, Thermodesulfobacteria, Bacteria

Not on your lists

comp(23038..24099)
DNA (1062bp) protein (354aa)
Peptidase M24 n=1 Tax=Thermodesulfobacterium geofontis (strain OPB45) RepID=F8C3N6_THEGP
peptidase M24
Peptidase M24 {ECO:0000313|EMBL:AEH22485.1}; TaxID=795359 species="Bacteria; Thermodesulfobacteria; Thermodesulfobacteriales; Thermodesulfobacteriaceae; Thermodesulfobacterium.;" source="Thermodesulfobacterium geofontis (strain OPF15).;"
ar4r2_scaffold_90_26

Not on your lists

24164..24940
DNA (777bp) protein (259aa)
NIF3 (NGG1p interacting factor 3)-like protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2F6T6_9BACT
NIF3 (NGG1p interacting factor 3)-like protein {ECO:0000313|EMBL:EKE26821.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
hypothetical protein
ar4r2_scaffold_90_27
ACD78, Gracilibacteria, Bacteria

Not on your lists

24968..25837
DNA (870bp) protein (290aa)
UTP-glucose-1-phosphate uridyltransferase; K00963 UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] id=124833 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
UTP-glucose-1-phosphate uridylyltransferase
Tax=ACD78
ar4r2_scaffold_90_28
unknown

Not on your lists

comp(25810..26454)
DNA (645bp) protein (215aa)

This feature has no annotations

ar4r2_scaffold_90_29

Not on your lists

comp(26460..27941)
DNA (1482bp) protein (494aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2G0P4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKE28818.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
hypothetical protein
ar4r2_scaffold_90_30

Not on your lists

28064..29557
DNA (1494bp) protein (498aa)
polysaccharide biosynthesis protein id=68802 bin=ACD49 species=ACD49 genus=ACD49 taxon_order=ACD49 taxon_class=ACD49 phylum=BD1-5 tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:EKD66024.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
polysaccharide biosynthesis protein
Displaying items 1-30 of 70 in total

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