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ar4r2_scaffold_92

Search features with annotation key words

Displaying items 1-30 of 66 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_92_1
Thermodesulfatator indicus, Thermodesulfatator, Thermodesulfobacteriales, Thermodesulfobacteria, Thermodesulfobacteria, Bacteria

Not on your lists

3..659
DNA (657bp) protein (219aa)
hypothetical protein n=1 Tax=Hippea alviniae RepID=UPI0003B335DE
AAA ATPase
AAA ATPase {ECO:0000313|EMBL:AEH44620.1}; TaxID=667014 species="Bacteria; Thermodesulfobacteria; Thermodesulfobacteriales; Thermodesulfobacteriaceae; Thermodesulfatator.;" source="Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812).;"
ar4r2_scaffold_92_2

Not on your lists

689..880
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Persicivirga phage P12024L RepID=I6S2I7_9VIRU
Uncharacterized protein {ECO:0000313|EMBL:KKL14027.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
ar4r2_scaffold_92_3
Geofilum rubicundum, Geofilum, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1113..1841
DNA (729bp) protein (243aa)
Pyruvate formate-lyase-activating enzyme {ECO:0000256|RuleBase:RU362053}; EC=1.97.1.4 {ECO:0000256|RuleBase:RU362053};; TaxID=1236989 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Geofilum.;" source="Geofilum rubicundum JCM 15548.;"
UPI0003CFC468 related cluster n=1 Tax=unknown RepID=UPI0003CFC468
Pyruvate formate-lyase 1-activating enzyme
ar4r2_scaffold_92_4
RHI_RIF_OD1_10_44_12b, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

1906..2490
DNA (585bp) protein (195aa)
Uncharacterized protein n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SEF3_LEPBA
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_RIF_OD1_10_44_12b_curated
ar4r2_scaffold_92_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2512..3429
DNA (918bp) protein (306aa)
phosphoglycerate dehydrogenase (EC:1.1.1.95)
Glycerate dehydrogenase n=2 Tax=Clostridium butyricum RepID=B1R2D5_CLOBU
2-hydroxyacid dehydrogenase {ECO:0000313|EMBL:KHD14413.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
On route to phosphoserine Jill Banfield (11/8/16)
ar4r2_scaffold_92_6
R_SM2F11_49_9, SM2F11, Bacteria

Not on your lists

3488..3904
DNA (417bp) protein (139aa)
hypothetical protein
Cell growth inhibitor/plasmid maintenance toxic component 27..134 id=983508 bin=RAAC1_SR1 species=RAAC1_SR1 genus=RAAC1_SR1 taxon_order=RAAC1_SR1 taxon_class=RAAC1_SR1 phylum=SR1 tax=RAAC1_SR1 organism_group=SR1
Tax=RIFCSPHIGHO2_01_FULL_SM2F11_49_9_curated
PemK-like, MazF-like toxin of type II toxin-antitoxin system PemK is a growth inhibitor in E. coli known to bind to the promoter region of the Pem operon, auto-regulating synthesis. This family represents the toxin molecule of a typical bacterial toxin-antitoxin system pairing. The family includes a number of different toxins, such as MazF, Kid, PemK, ChpA, ChpB and ChpAK Jill Banfield (11/10/16)
ar4r2_scaffold_92_7
Methanotorris igneus, Methanotorris, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

4015..6204
DNA (2190bp) protein (730aa)
Acetyl coenzyme A synthetase (ADP forming), alpha domain protein n=1 Tax=Methanotorris igneus (strain DSM 5666 / JCM 11834 / Kol 5) RepID=F6BDD3_METIK rbh
acetyl coenzyme A synthetase alpha domain-containing protein rbh
Acetyl coenzyme A synthetase (ADP forming), alpha domain protein {ECO:0000313|EMBL:AEF96494.1}; TaxID=880724 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanotorris.;" source="Methanotorris igneus (strain DSM 5666 / JCM 11834 / Kol 5).;"
acetyltransferase Jill Banfield (11/10/16)
ar4r2_scaffold_92_8

Not on your lists

comp(6238..7131)
DNA (894bp) protein (298aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75)
tRNA dimethylallyltransferase n=1 Tax=uncultured bacterium (gcode 4) RepID=K2ADP3_9BACT rbh
ar4r2_scaffold_92_9
Anabaena cylindrica, Anabaena, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(7158..7535)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Anabaena cylindrica (strain ATCC 27899 / PCC 7122) RepID=K9ZM70_ANACC
protein of unknown function DUF559
Uncharacterized protein {ECO:0000313|EMBL:AFZ59884.1}; TaxID=272123 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Anabaena.;" source="Anabaena cylindrica (strain ATCC 27899 / PCC 7122).;"
ar4r2_scaffold_92_10

Not on your lists

comp(7682..8815)
DNA (1134bp) protein (378aa)
kol:Kole_0487 malate dehydrogenase (oxaloacetate-decarboxylating) (EC:1.1.1.38); K00027 malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] id=68613 bin=ACD49 species=ACD49 genus=ACD49 taxon_order=ACD49 taxon_class=ACD49 phylum=BD1-5 tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD66820.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
malate dehydrogenase rbh
Pyruvate to oxaloacetate Jill Banfield (11/8/16)
ar4r2_scaffold_92_11
RIFOXYD12_FULL_Sulfurimonas_36_11_curated, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8859..10475)
DNA (1617bp) protein (539aa)
Putative uncharacterized protein n=1 Tax=Chlorobium chlorochromatii (strain CaD3) RepID=Q3APV3_CHLCH rbh
hypothetical protein rbh
Tax=RIFOXYD12_FULL_Sulfurimonas_36_11_curated
ar4r2_scaffold_92_12
unknown

Not on your lists

comp(10584..14213)
DNA (3630bp) protein (1210aa)

This feature has no annotations

ar4r2_scaffold_92_13
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

comp(14556..15635)
DNA (1080bp) protein (360aa)
type II secretion system F domain; K02653 type IV pilus assembly protein PilC id=69473 bin=ACD49 species=ACD49 genus=ACD49 taxon_order=ACD49 taxon_class=ACD49 phylum=BD1-5 tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
Type II secretion system protein
Tax=CG_GN02-01
ar4r2_scaffold_92_14

Not on your lists

comp(15668..16933)
DNA (1266bp) protein (422aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K1YCK2_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD30028.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
hypothetical protein
ar4r2_scaffold_92_15
unknown

Not on your lists

comp(16944..18275)
DNA (1332bp) protein (444aa)

This feature has no annotations

ar4r2_scaffold_92_16
unknown

Not on your lists

comp(18285..19118)
DNA (834bp) protein (278aa)

This feature has no annotations

ar4r2_scaffold_92_17
ACD78, Gracilibacteria, Bacteria

Not on your lists

comp(19195..21837)
DNA (2643bp) protein (881aa)
sti:Sthe_1001 exonuclease RNase T and DNA polymerase III; K03722 ATP-dependent DNA helicase DinG [EC:3.6.1.-] id=124858 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
DnaQ family exonuclease/DinG family helicase, putative rbh
Tax=ACD78
ar4r2_scaffold_92_18
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(22056..25106)
DNA (3051bp) protein (1017aa)
HsdR family type I site-specific deoxyribonuclease (EC:3.1.21.3); K01153 type I restriction enzyme, R subunit [EC:3.1.21.3] id=5050687 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c rbh
HsdR family type I site-specific deoxyribonuclease (EC:3.1.21.3) rbh
Tax=AR18
ar4r2_scaffold_92_19
CG_PER_03, Peregrinibacteria, Bacteria

Not on your lists

comp(25290..25889)
DNA (600bp) protein (200aa)
Transposase n=1 Tax=Francisella philomiragia subsp. philomiragia (strain ATCC 25017) RepID=B0TY31_FRAP2
transposase IS200 like family protein
Tax=CG_PER_03
ar4r2_scaffold_92_20
Epilithonimonas lactis, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26037..27179)
DNA (1143bp) protein (381aa)
restriction modification system DNA specificity domain-containing protein; K01154 type I restriction enzyme, S subunit [EC:3.1.21.3] id=5050689 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c rbh
Uncharacterized protein {ECO:0000313|EMBL:KFC18319.1}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;"
restriction modification system DNA specificity domain-containing protein
ar4r2_scaffold_92_21
RIFOXYB1_FULL_OP11_Woesebacteria_38_16_curated, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(27201..28250)
DNA (1050bp) protein (350aa)
toxin Fic n=1 Tax=Treponema primitia RepID=UPI00025553C8 rbh
cytoplasmic protein rbh
Tax=RIFOXYB1_FULL_OP11_Woesebacteria_38_16_curated
ar4r2_scaffold_92_22
RifOxyC12_full_OD1_Magasanikbacteria_33_11_curated, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(28275..29825)
DNA (1551bp) protein (517aa)
Type I restriction-modification system, M subunit n=1 Tax=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) RepID=A6UNC1_METVS rbh
type I restriction-modification system, M subunit rbh
Tax=RifOxyC12_full_OD1_Magasanikbacteria_33_11_curated
ar4r2_scaffold_92_trna_2
unknown

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comp(30006..30078)
DNA (73bp)
transferRNA Lys
ar4r2_scaffold_92_23
RIFCSPLOWO2_12_FULL_Flavobacteria_31_7_curated, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

30245..30751
DNA (507bp) protein (169aa)
hypothetical protein n=1 Tax=Capnocytophaga cynodegmi RepID=UPI000370AB40
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Flavobacteria_31_7_curated
ar4r2_scaffold_92_24
CG_Falkow_03, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(30752..32353)
DNA (1602bp) protein (534aa)
FAD dependent oxidoreductase id=2076234 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria) rbh
FAD dependent oxidoreductase rbh
Tax=CG_Falkow_03
ar4r2_scaffold_92_25

Not on your lists

32514..32981
DNA (468bp) protein (156aa)
def; peptide deformylase (EC:3.5.1.88); K01462 [EC:3.5.1.88] id=123832 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
peptide deformylase (EC:3.5.1.88)
ar4r2_scaffold_92_26
CG_GN02-02, Gracilibacteria, Bacteria

Not on your lists

33083..34138
DNA (1056bp) protein (352aa)
Sigma-70 region 4 protein (Fragment) n=1 Tax=uncultured bacterium (gcode 4) RepID=K1ZJL4_9BACT rbh
hypothetical protein
Tax=CG_GN02-02
ar4r2_scaffold_92_27

Not on your lists

comp(34165..34698)
DNA (534bp) protein (178aa)
transmembrane_regions 29..51 id=69122 bin=ACD49 species=ACD49 genus=ACD49 taxon_order=ACD49 taxon_class=ACD49 phylum=BD1-5 tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Uncharacterized protein {ECO:0000313|EMBL:EKD65935.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ar4r2_scaffold_92_28

Not on your lists

comp(34721..35299)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2AW50_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD65936.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
peptidase M22 glycoprotease
ar4r2_scaffold_92_29

Not on your lists

35450..36172
DNA (723bp) protein (241aa)
lepB; signal peptidase I (EC:3.4.21.89); K03100 signal peptidase I [EC:3.4.21.89] id=34620 bin=ACD2 species=ACD2 genus=ACD2 taxon_order=ACD2 taxon_class=ACD2 phylum=BD1-5 tax=ACD2 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
lepB; signal peptidase I (EC:3.4.21.89)
Displaying items 1-30 of 66 in total

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