ggKbase home page

ar4r2_scaffold_1019

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_1019_1
Candidatus Desulfamplus magnetomortis, Candidatus Desulfamplus, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..327
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Candidatus Desulfamplus magnetomortis RepID=L0R6Y2_9DELT
Uncharacterized protein {ECO:0000313|EMBL:CCO06731.1}; TaxID=1246637 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Desulfamplus.;" source="Candidatus Desulfamplus magnetomortis.;"
ar4r2_scaffold_1019_2
ACD78, Gracilibacteria, Bacteria

Not on your lists

comp(365..1588)
DNA (1224bp) protein (408aa)
resE; signal transduction histidine kinase id=124250 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Sensor histidine kinase
Tax=ACD78
ar4r2_scaffold_1019_3

Not on your lists

comp(1593..2255)
DNA (663bp) protein (221aa)
two component transcriptional regulator, winged helix family id=124251 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:EKD30159.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
transcriptional regulator
ar4r2_scaffold_1019_trna_1
unknown

Not on your lists

2419..2493
DNA (75bp)
transferRNA Thr
ar4r2_scaffold_1019_4
CG_PER_03, Peregrinibacteria, Bacteria

Not on your lists

2518..4056
DNA (1539bp) protein (513aa)
pth:PTH_1690 ATPase; K07391 magnesium chelatase family protein id=68666 bin=ACD49 species=ACD49 genus=ACD49 taxon_order=ACD49 taxon_class=ACD49 phylum=BD1-5 tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
Mg chelatase, subunit ChlI
Tax=CG_PER_03
ar4r2_scaffold_1019_5
CG_GN02-01, Gracilibacteria, Bacteria

Not on your lists

4082..5077
DNA (996bp) protein (332aa)
Methionyl-tRNA formyltransferase n=1 Tax=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) RepID=FMT_CALS8
methionyl-tRNA formyltransferase
Tax=CG_GN02-01
ar4r2_scaffold_1019_6

Not on your lists

5101..7089
DNA (1989bp) protein (663aa)
efflux transporter, RND family, MFP subunit id=69018 bin=ACD49 species=ACD49 genus=ACD49 taxon_order=ACD49 taxon_class=ACD49 phylum=BD1-5 tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EKD66279.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
RND family efflux transporter, MFP subunit
ar4r2_scaffold_1019_7
unknown

Not on your lists

7123..9948
DNA (2826bp) protein (942aa)

This feature has no annotations

No clues Jill Banfield (4/16/19)
ar4r2_scaffold_1019_8

Not on your lists

9967..13116
DNA (3150bp) protein (1050aa)
Heavy metal efflux pump n=1 Tax=uncultured bacterium (gcode 4) RepID=K2G242_9BACT rbh
Heavy metal efflux pump {ECO:0000313|EMBL:EKE29278.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
nolG; nodulation protein NolG
AcrB/AcrD/AcrF family : integral membrane proteins. Some involved in drug resistance. AcrB cooperates with a membrane fusion protein, AcrA, and an outer membrane channel TolC Jill Banfield (4/16/19)
ar4r2_scaffold_1019_9
Persephonella marina, Persephonella, Aquificales, Aquificae, Aquificae, Bacteria

Not on your lists

comp(13144..14382)
DNA (1239bp) protein (413aa)
ATPase n=1 Tax=Persephonella marina (strain DSM 14350 / EX-H1) RepID=C0QT30_PERMH
ATPase
ATPase {ECO:0000313|EMBL:ACO03252.1}; TaxID=123214 species="Bacteria; Aquificae; Aquificales; Hydrogenothermaceae; Persephonella.;" source="Persephonella marina (strain DSM 14350 / EX-H1).;"
ar4r2_scaffold_1019_10
BJP_IG2102_Bacteroidetes_40_12, Bacteroidetes, Bacteria

Not on your lists

comp(14546..15907)
DNA (1362bp) protein (454aa)
Putative ATPase (AAA+ superfamily) protein n=1 Tax=Galbibacter marinus RepID=K2Q0E1_9FLAO rbh
hypothetical protein
Tax=BJP_IG2102_Bacteroidetes_40_12
ATPase Jill Banfield (4/16/19)
ar4r2_scaffold_1019_11
CG_Elusi_02, Elusimicrobia, Bacteria

Not on your lists

comp(16084..17292)
DNA (1209bp) protein (403aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TK44_METAC
hypothetical protein
Tax=CG_Elusi_02
ATPase Jill Banfield (4/16/19)
ar4r2_scaffold_1019_12

Not on your lists

comp(17547..18764)
DNA (1218bp) protein (406aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FDJ5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKE15864.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
ATPase Jill Banfield (4/16/19)
ar4r2_scaffold_1019_13
Persephonella marina, Persephonella, Aquificales, Aquificae, Aquificae, Bacteria

Not on your lists

comp(18848..20155)
DNA (1308bp) protein (436aa)
ATPase n=1 Tax=Persephonella marina (strain DSM 14350 / EX-H1) RepID=C0QT30_PERMH
ATPase
ATPase {ECO:0000313|EMBL:ACO03252.1}; TaxID=123214 species="Bacteria; Aquificae; Aquificales; Hydrogenothermaceae; Persephonella.;" source="Persephonella marina (strain DSM 14350 / EX-H1).;"
ar4r2_scaffold_1019_14
unknown

Not on your lists

comp(20436..21899)
DNA (1464bp) protein (488aa)

This feature has no annotations

ar4r2_scaffold_1019_15
unknown

Not on your lists

comp(22046..22414)
DNA (369bp) protein (123aa)

This feature has no annotations

has gap Jill Banfield (4/16/19)
ar4r2_scaffold_1019_16
RIFOXYD12_FULL_Deltaproteobacteria_50_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22555..23205
DNA (651bp) protein (217aa)
ATPase n=1 Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VSH7_METIM
ATPase
Tax=RIFOXYD12_FULL_Deltaproteobacteria_50_9_curated
Displaying 17 items

View Taxonomy