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ar4r2_scaffold_804

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_804_1

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1..756
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K1Z4B2_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD44397.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ar4r2_scaffold_804_2
R_OD1_Giovannonibacteria_44_16, Giovannonibacteria, Parcubacteria, Bacteria

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820..1668
DNA (849bp) protein (283aa)
Uncharacterized protein id=4531818 bin=GWC2_Chloroflexi_73_18 species=Rhodanobacter spathiphylli genus=Rhodanobacter taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_44_16_curated
ar4r2_scaffold_804_3

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2031..3332
DNA (1302bp) protein (434aa)
hypothetical protein id=68944 bin=ACD49 species=ACD49 genus=ACD49 taxon_order=ACD49 taxon_class=ACD49 phylum=BD1-5 tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD66321.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
hypothetical protein
ar4r2_scaffold_804_4
GWA1_OD1_47_6, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

3349..3738
DNA (390bp) protein (130aa)
hypothetical protein
hypothetical protein id=15189975 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
Uncharacterized protein {ECO:0000313|EMBL:KKU74433.1}; TaxID=1619003 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Wolfebacteria) bacterium GW2011_GWA1_47_6.;"
ar4r2_scaffold_804_5
unknown

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3875..4168
DNA (294bp) protein (98aa)

This feature has no annotations

ar4r2_scaffold_804_6

Not on your lists

4187..4735
DNA (549bp) protein (183aa)
SUA5/YciO/YrdC/YwlC family protein id=68829 bin=ACD49 species=ACD49 genus=ACD49 taxon_order=ACD49 taxon_class=ACD49 phylum=BD1-5 tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
SUA5/YciO/YrdC/YwlC family protein {ECO:0000313|EMBL:EKD66222.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
predicted translation factor, Sua5/YciO/YrdC/YwlC domain protein
ar4r2_scaffold_804_7
Parcubacteria bacterium GW2011_GWA1_38_7, Parcubacteria, Bacteria

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4746..5570
DNA (825bp) protein (275aa)
Alpha/beta hydrolase family protein {ECO:0000313|EMBL:KKQ77807.1}; TaxID=1618783 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_38_7.;"
Possible alpha/beta hydrolase superfamily,slr1916 homolog id=3543946 bin=GWA1_ZB2_49_26 species=Bacillus cellulosilyticus genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
carboxylesterase BioH
ar4r2_scaffold_804_8
CG_GN02-02, Gracilibacteria, Bacteria

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comp(5567..5860)
DNA (294bp) protein (98aa)
Plasmid stabilization system n=1 Tax=Halanaerobium praevalens (strain ATCC 33744 / DSM 2228 / GSL) RepID=E3DLH0_HALPG
plasmid stabilization system
Tax=CG_GN02-02
ar4r2_scaffold_804_9
unknown

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comp(5864..6199)
DNA (336bp) protein (112aa)

This feature has no annotations

ar4r2_scaffold_804_10
R_RIF_OD1_05_38_8, RIF-OD1-5, Parcubacteria, Bacteria

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6277..7944
DNA (1668bp) protein (556aa)
MurF; UDP-N-acetylmuramyl pentapeptide synthase; K01929 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] id=5090521 bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
Mur ligase middle domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_05_38_8_curated
ar4r2_scaffold_804_11
R_OD1_Magasanikbacteria_33_17, Magasanikbacteria, Parcubacteria, Bacteria

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7961..9226
DNA (1266bp) protein (422aa)
degt/dnrj/eryc1/strs aminotransferase id=5090520 bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
degt/dnrj/eryc1/strs aminotransferase
Tax=RIFCSPHIGHO2_02_FULL_OD1_Magasanikbacteria_33_17_curated
ar4r2_scaffold_804_12
CG_GN02-02, Gracilibacteria, Bacteria

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9624..11048
DNA (1425bp) protein (475aa)
bba:Bd2328 protease (EC:3.4.-.-); K08303 putative protease [EC:3.4.-.-] id=69193 bin=ACD49 species=ACD49 genus=ACD49 taxon_order=ACD49 taxon_class=ACD49 phylum=BD1-5 tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
protease (EC:3.4.-.-)
Tax=CG_GN02-02
ar4r2_scaffold_804_13

Not on your lists

11117..11662
DNA (546bp) protein (182aa)
frr; ribosome recycling factor; K02838 ribosome recycling factor id=35068 bin=ACD2 species=ACD2 genus=ACD2 taxon_order=ACD2 taxon_class=ACD2 phylum=BD1-5 tax=ACD2 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
frr; ribosome recycling factor
ar4r2_scaffold_804_14
GWC2_OP11_39_8_plus, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(11693..12502)
DNA (810bp) protein (270aa)
ABC-3 protein n=1 Tax=uncultured bacterium RepID=K2GGQ6_9BACT
ABC-3 protein {ECO:0000313|EMBL:KKR33410.1}; TaxID=1618450 species="Bacteria; Microgenomates.;" source="Microgenomates (Gottesmanbacteria) bacterium GW2011_GWC2_39_8.;"
hypothetical protein
ar4r2_scaffold_804_15
Thermoanaerobacterium thermosaccharolyticum, Thermoanaerobacterium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12673..13425)
DNA (753bp) protein (251aa)
ABC transporter related n=1 Tax=Thermoanaerobacterium thermosaccharolyticum (strain ATCC 7956 / DSM 571 / NCIB 9385 / NCA 3814) RepID=D9TR00_THETC
ABC transporter
ABC transporter related {ECO:0000313|EMBL:ADL69780.1}; TaxID=580327 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Thermoanaerobacterium.;" source="Thermoanaerobacterium thermosaccharolyticum (strain ATCC 7956 / DSM; 571 / NCIB 9385 / NCA 3814) (Clostridium thermosaccharolyticum).;"
ar4r2_scaffold_804_16
Gracilibacillus halophilus, Gracilibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13500..14504)
DNA (1005bp) protein (335aa)
Mn/Zn ABC transporter extracellular binding protein n=1 Tax=Gracilibacillus halophilus YIM-C55.5 RepID=N4WL34_9BACI
Mn/Zn ABC transporter extracellular binding protein {ECO:0000313|EMBL:ENH96887.1}; TaxID=1308866 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Gracilibacillus.;" source="Gracilibacillus halophilus YIM-C55.5.;"
zinc ABC transporter substrate-binding protein
ar4r2_scaffold_804_17
R_Gammaproteobacteria_38_14, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14530..14925)
DNA (396bp) protein (132aa)
Fe2+/Zn2+ uptake regulation protein n=1 Tax=Desulfitobacterium dichloroeliminans (strain LMG P-21439 / DCA1) RepID=L0F8K5_DESDL
Fur family ferric uptake regulator
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_38_14_curated
ar4r2_scaffold_804_18
GWA2_OP11_35_19, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(15030..15644)
DNA (615bp) protein (205aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP74437.1}; TaxID=1618478 species="Bacteria; Microgenomates.;" source="Microgenomates (Roizmanbacteria) bacterium GW2011_GWA2_35_19.;"
ar4r2_scaffold_804_19
unknown

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15830..16024
DNA (195bp) protein (65aa)

This feature has no annotations

ar4r2_scaffold_804_20
RLO_OD1_Magasanikbacteria_43_12, Magasanikbacteria, Parcubacteria, Bacteria

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comp(16311..17573)
DNA (1263bp) protein (421aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA036-E14 RepID=UPI00036A2D8C rbh
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_OD1_Magasanikbacteria_43_12_curated
ar4r2_scaffold_804_21

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comp(17864..19012)
DNA (1149bp) protein (383aa)
Glycosyl transferase, group 1 n=1 Tax=uncultured bacterium (gcode 4) RepID=K2AWZ2_9BACT rbh
Glycosyl transferase, group 1 {ECO:0000313|EMBL:EKD66307.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
glycosyl transferase family protein
ar4r2_scaffold_804_22

Not on your lists

19172..20314
DNA (1143bp) protein (381aa)
Peptidase M23 n=1 Tax=uncultured bacterium (gcode 4) RepID=K2F5I0_9BACT
Peptidase M23 {ECO:0000313|EMBL:EKE26346.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ar4r2_scaffold_804_23

Not on your lists

20320..20787
DNA (468bp) protein (156aa)
smpB; putative SsrA-binding protein; K03664 SsrA-binding protein id=69025 bin=ACD49 species=ACD49 genus=ACD49 taxon_order=ACD49 taxon_class=ACD49 phylum=BD1-5 tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
SsrA-binding protein
ar4r2_scaffold_804_24
unknown

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20798..21217
DNA (420bp) protein (140aa)

This feature has no annotations

ar4r2_scaffold_804_25
unknown

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21304..21600
DNA (297bp) protein (99aa)

This feature has no annotations

ar4r2_scaffold_804_26
GWA2_OD1_53_7_partial, Giovannonibacteria, Parcubacteria, Bacteria

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21797..23059
DNA (1263bp) protein (421aa)
seryl-tRNA synthetase (EC:6.1.1.11); K01875 seryl-tRNA synthetase [EC:6.1.1.11] id=5090922 bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome rbh
seryl-tRNA synthetase (EC:6.1.1.11) rbh
Serine-tRNA ligase {ECO:0000313|EMBL:KKW34289.1}; TaxID=1618650 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWA2_53_7.;"
ar4r2_scaffold_804_27

Not on your lists

23214..23426
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2AW11_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD65886.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ar4r2_scaffold_804_28

Not on your lists

23429..23662
DNA (234bp) protein (78aa)
YcfA/nrd intein domain id=69206 bin=ACD49 species=ACD49 genus=ACD49 taxon_order=ACD49 taxon_class=ACD49 phylum=BD1-5 tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Uncharacterized protein {ECO:0000313|EMBL:EKD65887.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ar4r2_scaffold_804_29
unknown

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comp(23730..24176)
DNA (447bp) protein (149aa)

This feature has no annotations

ar4r2_scaffold_804_30
unknown

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comp(24179..24601)
DNA (423bp) protein (141aa)

This feature has no annotations

Displaying 30 items

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