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ar4r2_scaffold_562

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_562_1
unknown

Not on your lists

220..468
DNA (249bp) protein (83aa)

This feature has no annotations

ar4r2_scaffold_562_2
unknown

Not on your lists

586..1455
DNA (870bp) protein (290aa)

This feature has no annotations

ar4r2_scaffold_562_3

Not on your lists

1409..2146
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2AFB8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD66645.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
DNA polymerase III delta
ar4r2_scaffold_562_4
Polaribacter sp. Hel1_85, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2130..3008)
DNA (879bp) protein (293aa)
Ion transport protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S9K2_PEDSD
Potassium voltage-gated channel subfamily KQT {ECO:0000313|EMBL:KGL63675.1}; TaxID=1250005 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter sp. Hel1_85.;"
Ion transport protein
ar4r2_scaffold_562_5
GWA2_Bacteroidetes_31_9_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3072..4316)
DNA (1245bp) protein (415aa)
Putative uncharacterized protein id=3893035 bin=GWF2_Bacteroidetes_33_38 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699 rbh
peptidase M48
Tax=GWA2_Bacteroidetes_31_9_curated
ar4r2_scaffold_562_6
ACD78, Gracilibacteria, Bacteria

Not on your lists

comp(4328..6106)
DNA (1779bp) protein (593aa)
seg 22..39 id=123851 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
hypothetical protein
Tax=ACD78
ar4r2_scaffold_562_7
BJP_08E140C01_Falkowbacteria_33_19, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(6151..6588)
DNA (438bp) protein (146aa)
Alanine racemase n=1 Tax=Brachyspira sp. CAG:700 RepID=R5LNI2_9SPIR
hypothetical protein
Tax=BJP_08E140C01_Falkowbacteria_33_19
ar4r2_scaffold_562_8
BJP_08E140C01_Falkowbacteria_33_19, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(6575..7363)
DNA (789bp) protein (263aa)
UPI0003D02B2B related cluster n=1 Tax=unknown RepID=UPI0003D02B2B
hypothetical protein
Tax=BJP_08E140C01_Falkowbacteria_33_19
ar4r2_scaffold_562_9
GWF1_OD1_34_10, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

comp(7375..7965)
DNA (591bp) protein (197aa)
Maf-like protein maf n=1 Tax=Clostridium tetani 12124569 RepID=U6EZS8_CLOTA
Septum formation protein Maf {ECO:0000313|EMBL:KKP58443.1}; TaxID=1618715 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011_GWF1_34_10.;"
maf; Maf-like protein
ar4r2_scaffold_562_10

Not on your lists

comp(7977..10283)
DNA (2307bp) protein (769aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129); K03587 cell division protein FtsI (penicillin-binding protein 3) [EC:2.4.1.129] id=69570 bin=ACD49 species=ACD49 genus=ACD49 taxon_order=ACD49 taxon_class=ACD49 phylum=BD1-5 tax=ACD49 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD66741.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
Penicillin-binding protein, transpeptidase protein
ar4r2_scaffold_562_11

Not on your lists

comp(10291..11850)
DNA (1560bp) protein (520aa)
hypothetical protein id=132374 bin=ACD80 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=ACD80 organism_group=SR1
Uncharacterized protein {ECO:0000313|EMBL:EKD25459.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
hypothetical protein
ar4r2_scaffold_562_12
ACD80, SR1, Bacteria

Not on your lists

comp(11918..13924)
DNA (2007bp) protein (669aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K1XZ52_9BACT
fimbrial protein pilin
Tax=ACD80
ar4r2_scaffold_562_13
unknown

Not on your lists

comp(14501..16762)
DNA (2262bp) protein (754aa)

This feature has no annotations

ar4r2_scaffold_562_14
ACD3, Gracilibacteria, Bacteria

Not on your lists

comp(16830..18236)
DNA (1407bp) protein (469aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2GWM0_9BACT
General secretion pathway protein G
Tax=ACD3
ar4r2_scaffold_562_15
ACD3, Gracilibacteria, Bacteria

Not on your lists

comp(18265..19671)
DNA (1407bp) protein (469aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2F9F6_9BACT
fimbrial protein pilin
Tax=ACD3
ar4r2_scaffold_562_16
CG_GN02-02, Gracilibacteria, Bacteria

Not on your lists

20033..22633
DNA (2601bp) protein (867aa)
hth:HTH_0024 nrdA; ribonucleotide reductase alpha subunit; K00525 ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] id=84598 bin=ACD56 species=ACD56 genus=ACD56 taxon_order=ACD56 taxon_class=ACD56 phylum=OD1-i tax=ACD56 organism_group=OD1-i organism_desc=OD1-i rbh
hypothetical protein
Tax=CG_GN02-02
ar4r2_scaffold_562_17
unknown

Not on your lists

22721..23062
DNA (342bp) protein (114aa)

This feature has no annotations

ar4r2_scaffold_562_18
unknown

Not on your lists

23098..23472
DNA (375bp) protein (125aa)

This feature has no annotations

ar4r2_scaffold_562_19
unknown

Not on your lists

23613..24365
DNA (753bp) protein (251aa)
CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-] (HMM)
No CRISPR array on this contig Jill Banfield (11/8/16)
ar4r2_scaffold_562_20
Caminibacter mediatlanticus, Caminibacter, Nautiliales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

24373..26058
DNA (1686bp) protein (562aa)
CRISPR-associated protein, Csm1 family n=1 Tax=Caminibacter mediatlanticus TB-2 RepID=A6DE76_9PROT
CRISPR-associated protein, Csm1 family {ECO:0000313|EMBL:EDM23134.1}; TaxID=391592 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Nautiliales; Nautiliaceae; Caminibacter.;" source="Caminibacter mediatlanticus TB-2.;"
CRISPR-associated protein, Csm1 family
ar4r2_scaffold_562_21
unknown

Not on your lists

26061..26603
DNA (543bp) protein (181aa)
CRISPR-associated protein Csm2
ar4r2_scaffold_562_22
Treponema succinifaciens, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

26626..27348
DNA (723bp) protein (241aa)
CRISPR-associated RAMP protein, Csm3 family n=1 Tax=Treponema succinifaciens (strain ATCC 33096 / DSM 2489 / 6091) RepID=F2NWD7_TRES6
Csm3 family CRISPR-associated RAMP protein
CRISPR-associated RAMP protein, Csm3 family {ECO:0000313|EMBL:AEB15058.1}; TaxID=869209 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema succinifaciens (strain ATCC 33096 / DSM 2489 / 6091).;"
ar4r2_scaffold_562_23
unknown

Not on your lists

27374..28660
DNA (1287bp) protein (429aa)
CRISPR-associated protein Csm5
ar4r2_scaffold_562_24

Not on your lists

28726..29970
DNA (1245bp) protein (415aa)
COG: COG1373
hypothetical protein; K07133 id=3350 bin=ACD11 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=ACD11 organism_group=OD1-i organism_desc=OD1-i rbh
Uncharacterized protein {ECO:0000313|EMBL:EKE15864.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
ar4r2_scaffold_562_25
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

29984..30970
DNA (987bp) protein (329aa)
CRISPR-associated protein Csm4
Uncharacterized protein n=1 Tax=Caminibacter mediatlanticus TB-2 RepID=A6DE73_9PROT
Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
ar4r2_scaffold_562_26
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31067..31498)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A8 RepID=N9YNR9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ19183.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
transposase IS200-family protein
Displaying 26 items

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