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ar4r2_scaffold_1605

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_1605_1
CG_Kuenen_02, Kuenenbacteria, Parcubacteria, Bacteria

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comp(2..607)
DNA (606bp) protein (202aa)
Transposase insI for insertion sequence element IS30B/C/D id=4699897 bin=GWC2_Deltaproteobacteria_56_8 species=PER_GWC2_39_15 genus=PER_GWC2_39_15 taxon_order=PER_GWC2_39_15 taxon_class=PER_GWC2_39_15 phylum=PER tax=GWC2_Deltaproteobacteria_56_8 organism_group=Deltaproteobacteria
transposase
Tax=CG_Kuenen_02
ar4r2_scaffold_1605_2
unknown

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793..2151
DNA (1359bp) protein (453aa)

This feature has no annotations

ar4r2_scaffold_1605_3

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2162..2599
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2GSH6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKE26260.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ar4r2_scaffold_1605_4

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comp(2601..4031)
DNA (1431bp) protein (477aa)
MiaB-like tRNA modifying enzyme YliG (EC:1.3.1.74) id=123512 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|SAAS:SAAS00083292}; EC=2.8.4.4 {ECO:0000256|SAAS:SAAS00179441};; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
hypothetical protein
ar4r2_scaffold_1605_5

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4064..5578
DNA (1515bp) protein (505aa)
transmembrane_regions 59..81 id=123661 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD29960.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ar4r2_scaffold_1605_6

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5612..7123
DNA (1512bp) protein (504aa)
transmembrane_regions 59..81 id=123661 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Uncharacterized protein {ECO:0000313|EMBL:EKD29960.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ar4r2_scaffold_1605_7

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comp(7120..8451)
DNA (1332bp) protein (444aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase {ECO:0000256|SAAS:SAAS00084542}; EC=6.3.2.9 {ECO:0000256|SAAS:SAAS00084342};; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
UDP-N-acetylmuramoylalanine-D-glutamate ligase n=1 Tax=uncultured bacterium (gcode 4) RepID=K1X5H8_9BACT rbh
UDP-N-acetylmuramoylalanine--D-glutamate ligase
ar4r2_scaffold_1605_8
unknown

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comp(8455..8895)
DNA (441bp) protein (147aa)

This feature has no annotations

ar4r2_scaffold_1605_9

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comp(8903..9493)
DNA (591bp) protein (197aa)
DedA family protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2BBW4_9BACT
DedA family protein {ECO:0000313|EMBL:EKD66273.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
hypothetical protein
ar4r2_scaffold_1605_10
unknown

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comp(9538..9708)
DNA (171bp) protein (57aa)

This feature has no annotations

ar4r2_scaffold_1605_11
unknown

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comp(9789..10283)
DNA (495bp) protein (165aa)

This feature has no annotations

ar4r2_scaffold_1605_12
unknown

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comp(10294..10611)
DNA (318bp) protein (106aa)

This feature has no annotations

ar4r2_scaffold_1605_13

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comp(10621..12486)
DNA (1866bp) protein (622aa)
adg:Adeg_2059 ATP-dependent metalloprotease FtsH (EC:3.6.4.3); K03798 cell division protease FtsH [EC:3.4.24.-] id=124514 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 rbh
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ftsH; ATP-dependent metalloprotease (EC:3.4.24.-) rbh
ar4r2_scaffold_1605_14
Thermoplasma acidophilum, Thermoplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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comp(12563..13363)
DNA (801bp) protein (267aa)
Putative uncharacterized protein Ta0569 n=1 Tax=Thermoplasma acidophilum (strain ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165) RepID=Q9HKM8_THEAC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAC11709.1}; TaxID=273075 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Thermoplasmataceae; Thermoplasma.;" source="Thermoplasma acidophilum (strain ATCC 25905 / DSM 1728 / JCM 9062 /; NBRC 15155 / AMRC-C165).;"
ar4r2_scaffold_1605_15

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comp(13438..15036)
DNA (1599bp) protein (533aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K1XZ52_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD30231.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ar4r2_scaffold_1605_16
Pseudoalteromonas citrea, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(15131..15634)
DNA (504bp) protein (168aa)
Integrase catalytic subunit n=1 Tax=Pseudoalteromonas citrea NCIMB 1889 RepID=U1KQN4_9GAMM
Integrase catalytic subunit {ECO:0000313|EMBL:ERG18313.1}; TaxID=1117314 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseudoalteromonas citrea NCIMB 1889.;"
transposase
Displaying 16 items

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