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ar4r2_scaffold_588

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_588_1

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2..1168
DNA (1167bp) protein (389aa)
hypothetical protein id=50726 bin=ACD3 species=ACD3 genus=ACD3 taxon_order=ACD3 taxon_class=ACD3 phylum=BD1-5 tax=ACD3 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Uncharacterized protein {ECO:0000313|EMBL:EKE27346.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ar4r2_scaffold_588_2

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2191..4194
DNA (2004bp) protein (668aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2BVD5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD66159.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
lipoprotein
ar4r2_scaffold_588_3

Not on your lists

comp(4240..5169)
DNA (930bp) protein (310aa)
Methicillin resistance protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2F5P6_9BACT
Methicillin resistance protein {ECO:0000313|EMBL:EKE26406.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
methicillin resistance protein
ar4r2_scaffold_588_4
GWA2_WS6_37_6, WS6, Bacteria

Not on your lists

5323..5910
DNA (588bp) protein (196aa)
ppa-2; inorganic pyrophosphatase; K01507 inorganic pyrophosphatase [EC:3.6.1.1] id=5102303 bin=GWF1_WS6_37_7 species=WS6_GWF1_36_7 genus=WS6_GWF1_36_7 taxon_order=WS6_GWF1_36_7 taxon_class=WS6_GWF1_36_7 phylum=WS6 tax=GWF1_WS6_37_7 organism_group=WS6 (Doikabacteria) rbh
inorganic pyrophosphatase (EC:3.6.1.1)
Inorganic pyrophosphatase {ECO:0000313|EMBL:KKQ34481.1}; TaxID=1619087 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWA2_37_6.;"
ar4r2_scaffold_588_5

Not on your lists

6096..7100
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K1YPA2_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD44770.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
filamentation induced by cAMP protein Fic
ar4r2_scaffold_588_6
RBG_13_OD1_Falkowbacteria_39_9_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

7093..7875
DNA (783bp) protein (261aa)
Radical SAM domain protein id=1892002 bin=GWA2_Elusimicrobia_69_24 species=Clostridium papyrosolvens genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
radical SAM protein
Tax=RBG_13_OD1_Falkowbacteria_39_9_curated
ar4r2_scaffold_588_7
ACD78, Gracilibacteria, Bacteria

Not on your lists

7995..8447
DNA (453bp) protein (151aa)
Transcriptional repressor NrdR n=1 Tax=uncultured bacterium (gcode 4) RepID=K1YCS3_9BACT
ATP-cone domain protein
Tax=ACD78
ar4r2_scaffold_588_8
Thiocystis violascens, Thiocystis, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8559..11669
DNA (3111bp) protein (1037aa)
Oxygen-sensitive ribonucleoside-triphosphate reductase n=1 Tax=Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) RepID=I3YA07_THIV6 rbh
oxygen-sensitive ribonucleoside-triphosphate reductase rbh
Oxygen-sensitive ribonucleoside-triphosphate reductase {ECO:0000313|EMBL:AFL73825.1}; TaxID=765911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocystis.;" source="Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) (Chromatium; violascens).;"
ar4r2_scaffold_588_9
R_OD1_Moranbacteria_54_31, Moranbacteria, Parcubacteria, Bacteria

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11716..11853
DNA (138bp) protein (46aa)
UPI0003CFBB56 related cluster n=1 Tax=unknown RepID=UPI0003CFBB56
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_OD1_Moranbacteria_54_31_curated
ar4r2_scaffold_588_10

Not on your lists

11861..12559
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K1XJ11_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD30355.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
hypothetical protein
ar4r2_scaffold_588_11
CG_GN02-01, Gracilibacteria, Bacteria

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12657..13265
DNA (609bp) protein (203aa)
seg 6..21 id=124245 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
Tax=CG_GN02-01
ar4r2_scaffold_588_12
Anoxybacillus flavithermus, Anoxybacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13359..14867)
DNA (1509bp) protein (503aa)
Uncharacterized protein n=1 Tax=Anoxybacillus flavithermus AK1 RepID=M8D3C9_9BACI
Uncharacterized protein {ECO:0000313|EMBL:EMT45377.1}; TaxID=1297581 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Anoxybacillus.;" source="Anoxybacillus flavithermus AK1.;"
hypothetical protein
ar4r2_scaffold_588_13
RIFOXYC1_FULL_RIF_OD1_03_37_11_curated, RIF-OD1-3, Parcubacteria, Bacteria

Not on your lists

comp(14898..15830)
DNA (933bp) protein (311aa)
thyA; thymidylate synthase (EC:2.1.1.45) rbh
Thymidylate synthase n=1 Tax=Acholeplasma laidlawii (strain PG-8A) RepID=TYSY_ACHLI rbh
Tax=RIFOXYC1_FULL_RIF_OD1_03_37_11_curated
ar4r2_scaffold_588_14
Halobacteriovorax marinus, Halobacteriovorax, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15843..16433)
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Bacteriovorax marinus (strain ATCC BAA-682 / DSM 15412 / SJ) RepID=E1X090_BACMS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBW26318.1}; TaxID=862908 species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Halobacteriovoraceae; Halobacteriovorax.;" source="Halobacteriovorax marinus (strain ATCC BAA-682 / DSM 15412 / SJ); (Bacteriovorax marinus).;"
ar4r2_scaffold_588_15
unknown

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comp(16581..16799)
DNA (219bp) protein (73aa)

This feature has no annotations

ar4r2_scaffold_588_16
RIFOXYB2_FULL_Peregrinibacteria_32_7_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(16897..17133)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Candidatus Saccharimonas aalborgensis RepID=R4PLJ4_9BACT
hypothetical protein
Tax=RIFOXYB2_FULL_Peregrinibacteria_32_7_curated
ar4r2_scaffold_588_17
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(17096..17806)
DNA (711bp) protein (237aa)
Thymidylate kinase id=1987545 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
thymidylate kinase
Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
ar4r2_scaffold_588_18

Not on your lists

comp(17883..18854)
DNA (972bp) protein (324aa)
tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2GRW8_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKE26055.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ar4r2_scaffold_588_19
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(18839..19201)
DNA (363bp) protein (121aa)
Putative uncharacterized protein n=1 Tax=Methanocaldococcus vulcanius (strain ATCC 700851 / DSM 12094 / M7) RepID=C9RFB1_METVM
hypothetical protein
Tax=GWC2_Ignavibacteria_rel_36_12_curated
ar4r2_scaffold_588_20
Archaeoglobus veneficus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

comp(19207..19497)
DNA (291bp) protein (97aa)
DNA polymerase beta domain protein region n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KN03_ARCVS
DNA polymerase beta domain-containing protein
DNA polymerase beta domain protein region {ECO:0000313|EMBL:AEA47279.1}; TaxID=693661 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobus veneficus (strain DSM 11195 / SNP6).;"
ar4r2_scaffold_588_21
R_OP11_Gottesmanbacteria_39_10, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(19508..20275)
DNA (768bp) protein (256aa)
tryptophan synthase subunit slpha; K01695 tryptophan synthase alpha chain [EC:4.2.1.20] id=5098544 bin=PER_GWF2_43_18 species=PER_GWF2_42_17 genus=PER_GWF2_42_17 taxon_order=PER_GWF2_42_17 taxon_class=PER_GWF2_42_17 phylum=PER tax=PER_GWF2_43_18 organism_group=PER (Peregrinibacteria)
tryptophan synthase subunit alpha (EC:4.2.1.20)
Tax=RIFCSPHIGHO2_01_FULL_OP11_Gottesmanbacteria_39_10_curated
L-tryptophan Jill Banfield (11/8/16)
ar4r2_scaffold_588_22
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

comp(20310..21578)
DNA (1269bp) protein (423aa)
tryptophan synthase subunit beta; K01696 tryptophan synthase beta chain [EC:4.2.1.20] id=5098545 bin=PER_GWF2_43_18 species=PER_GWF2_42_17 genus=PER_GWF2_42_17 taxon_order=PER_GWF2_42_17 taxon_class=PER_GWF2_42_17 phylum=PER tax=PER_GWF2_43_18 organism_group=PER (Peregrinibacteria) rbh
Tryptophan synthase subunit beta, tryptophan synthase beta chain {ECO:0000313|EMBL:KKT01800.1}; EC=4.2.1.20 {ECO:0000313|EMBL:KKT01800.1};; TaxID=1619068 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_43_17.;"
tryptophan synthase beta chain (EC:4.2.1.20) rbh
EC:4.2.1.20 (subunit) Jill Banfield (11/8/16)
ar4r2_scaffold_588_23
Altiarchaeum hamiconexum, Altiarchaeum, Altiarchaeales, Euryarchaeota, Archaea

Not on your lists

comp(21569..22852)
DNA (1284bp) protein (428aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000364431D rbh
anthranilate synthase
Tax=Altiarchaeum hamiconexum
4.1.3.27 Phe / Tyr / Trp Jill Banfield (11/8/16)
ar4r2_scaffold_588_24

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comp(22818..23534)
DNA (717bp) protein (239aa)
Anthranilate synthase, phenazine specific {ECO:0000313|EMBL:CEG12787.1}; EC=4.1.3.27 {ECO:0000313|EMBL:CEG12787.1};; TaxID=717931 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="groundwater metagenome.;"
2-Amino-2-deoxy-isochorismate synthase (EC:4.1.3.-)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000364431D
2.6.1.86 ? Phenazine biosynthesis (Quorum sensing?) Jill Banfield (11/8/16)
ar4r2_scaffold_588_25
unknown

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comp(23538..24194)
DNA (657bp) protein (219aa)

This feature has no annotations

ar4r2_scaffold_588_26
R_Peregrinibacteria_39_12, Peregrinibacteria, Bacteria

Not on your lists

comp(24499..25377)
DNA (879bp) protein (293aa)
Tryptophan biosynthesis protein trpCF; K13498 indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase [EC:4.1.1.48 5.3.1.24] id=5098547 bin=PER_GWF2_43_18 species=PER_GWF2_42_17 genus=PER_GWF2_42_17 taxon_order=PER_GWF2_42_17 taxon_class=PER_GWF2_42_17 phylum=PER tax=PER_GWF2_43_18 organism_group=PER (Peregrinibacteria)
anthranilate synthase/para-aminobenzoate synthase glutamine amidotransferase subunit
Tax=RIFCSPLOWO2_01_FULL_Peregrinibacteria_39_12_curated
TrpG/PapA Jill Banfield (11/8/16)
ar4r2_scaffold_588_27
Persephonella marina, Persephonella, Aquificales, Aquificae, Aquificae, Bacteria

Not on your lists

comp(25347..26066)
DNA (720bp) protein (240aa)
trpC; indole-3-glycerol-phosphate synthase (EC:4.1.1.48)
Indole-3-glycerol phosphate synthase {ECO:0000256|SAAS:SAAS00046689}; EC=4.1.1.48 {ECO:0000256|SAAS:SAAS00046705};; TaxID=123214 species="Bacteria; Aquificae; Aquificales; Hydrogenothermaceae; Persephonella.;" source="Persephonella marina (strain DSM 14350 / EX-H1).;"
Indole-3-glycerol phosphate synthase n=1 Tax=Persephonella marina (strain DSM 14350 / EX-H1) RepID=C0QPX6_PERMH
Trp synthesis prior to 4.2.1.20 Jill Banfield (11/8/16)
ar4r2_scaffold_588_28
R_RIF_OP11_01_43_15b, RIF-OP11-1, Microgenomates, Bacteria

Not on your lists

comp(26076..26339)
DNA (264bp) protein (88aa)
hypothetical protein id=5097170 bin=PER_GWF2_39_17 species=PER_GWF2_39_17 genus=PER_GWF2_39_17 taxon_order=PER_GWF2_39_17 taxon_class=PER_GWF2_39_17 phylum=PER tax=PER_GWF2_39_17 organism_group=PER (Peregrinibacteria)
Tax=RIFCSPHIGHO2_01_FULL_RIF_OP11_01_43_15b_curated
ar4r2_scaffold_588_29
GWC2_CPR2_39_35, CPR2, Bacteria

Not on your lists

comp(26412..27248)
DNA (837bp) protein (279aa)
Fructose-1,6-bisphosphate aldolase, class II id=3072222 bin=GWC1_TM7_41_48 species=Clostridiaceae bacterium L21-TH-D2 genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC1_TM7_41_48 organism_group=TM7
fructose-1,6-bisphosphate aldolase
Tax=GWC2_CPR2_39_35
ar4r2_scaffold_588_30
CG_Epsilon_02, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27656..28654)
DNA (999bp) protein (333aa)
Uncharacterized protein n=1 Tax=candidate division TG3 bacterium ACht1 RepID=U7D4W5_9BACT rbh
hypothetical protein rbh
Tax=CG_Epsilon_02
Displaying items 1-30 of 33 in total

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